RNA–Protein interactions for RNA: ENST00000411912.5

USP34-202, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 5

Gene USP34, Length 4,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-202ENST00000411912 NISCHQ9Y2I1 1504 aa8.69□□□□□ -1.02
USP34-202ENST00000411912 CCDC180Q9P1Z9 1646 aa7.65□□□□□ -1.19
USP34-202ENST00000411912 DCAF8L2P0C7V8 631 aa7.54□□□□□ -1.2
USP34-202ENST00000411912 ABCC9O60706 1549 aa7.53□□□□□ -1.2
USP34-202ENST00000411912 RB1CC1Q8TDY2 1594 aa7.25□□□□□ -1.25
USP34-202ENST00000411912 NACADO15069 1562 aa7.24□□□□□ -1.25
USP34-202ENST00000411912 ZCCHC6Q5VYS8 1495 aaKnown RBP7.23□□□□□ -1.25
USP34-202ENST00000411912 DCAF1Q9Y4B6 1507 aa7.16□□□□□ -1.26
USP34-202ENST00000411912 MYO15BQ96JP2 1530 aa7.16□□□□□ -1.26
USP34-202ENST00000411912 PABPN1Q86U42 306 aaKnown RBP eCLIP7.09□□□□□ -1.275e-12■□□□□ 8.7
USP34-202ENST00000411912 SHROOM4Q9ULL8 1493 aa7.08□□□□□ -1.28
USP34-202ENST00000411912 SCRIBQ14160 1630 aa7.06□□□□□ -1.28
USP34-202ENST00000411912 UNC13AQ9UPW8 1703 aa6.92□□□□□ -1.3
USP34-202ENST00000411912 MYT1Q01538 1121 aa6.88□□□□□ -1.31
USP34-202ENST00000411912 BICRAQ9NZM4 1560 aa6.87□□□□□ -1.31
USP34-202ENST00000411912 SUPT5HO00267 1087 aaKnown RBP6.78□□□□□ -1.32
USP34-202ENST00000411912 EIF4G1Q04637 1599 aaKnown RBP6.78□□□□□ -1.32
USP34-202ENST00000411912 BAZ1AQ9NRL2 1556 aaPredicted RBP6.78□□□□□ -1.32
USP34-202ENST00000411912 CECR2Q9BXF3 1484 aa6.76□□□□□ -1.33
USP34-202ENST00000411912 SMARCA2P51531 1590 aa6.73□□□□□ -1.33
USP34-202ENST00000411912 CC2D2AQ9P2K1 1620 aa6.73□□□□□ -1.33
USP34-202ENST00000411912 PELP1Q8IZL8 1130 aaKnown RBP6.72□□□□□ -1.33
USP34-202ENST00000411912 DNAJC5BQ9UF47 199 aa6.72□□□□□ -1.33
USP34-202ENST00000411912 BAZ1BQ9UIG0 1483 aaKnown RBP6.71□□□□□ -1.33
USP34-202ENST00000411912 SMARCA4P51532 1647 aa6.71□□□□□ -1.34
USP34-202ENST00000411912 ATAD2BQ9ULI0 1458 aa6.68□□□□□ -1.34
USP34-202ENST00000411912 MROH2BQ7Z745 1585 aa6.68□□□□□ -1.34
USP34-202ENST00000411912 RSF1Q96T23 1441 aaPredicted RBP6.67□□□□□ -1.34
USP34-202ENST00000411912 NCAPD3P42695 1498 aa6.66□□□□□ -1.34
USP34-202ENST00000411912 HMGXB3Q12766 1538 aa6.63□□□□□ -1.35
USP34-202ENST00000411912 WIZO95785 1651 aa6.6□□□□□ -1.35
USP34-202ENST00000411912 ERCC6Q03468 1493 aa6.59□□□□□ -1.35
USP34-202ENST00000411912 PEG3Q9GZU2 1588 aa6.58□□□□□ -1.36
USP34-202ENST00000411912 TOP2AP11388 1531 aaKnown RBP6.58□□□□□ -1.36
USP34-202ENST00000411912 PDS5BQ9NTI5 1447 aa6.55□□□□□ -1.36
USP34-202ENST00000411912 CADPSQ9ULU8 1353 aa6.53□□□□□ -1.36
USP34-202ENST00000411912 CCDC88BA6NC98 1476 aa6.5□□□□□ -1.37
USP34-202ENST00000411912 TTBK1Q5TCY1 1321 aaPredicted RBP6.5□□□□□ -1.37
USP34-202ENST00000411912 LAMC3Q9Y6N6 1575 aa6.49□□□□□ -1.37
USP34-202ENST00000411912 CEP164Q9UPV0 1460 aa6.47□□□□□ -1.37
USP34-202ENST00000411912 NESP48681 1621 aa6.46□□□□□ -1.37
USP34-202ENST00000411912 FANCD2Q9BXW9 1451 aa6.45□□□□□ -1.38
USP34-202ENST00000411912 CFTRP13569 1480 aa6.45□□□□□ -1.38
USP34-202ENST00000411912 TRIM41Q8WV44 630 aa6.41□□□□□ -1.38
USP34-202ENST00000411912 MRC2Q9UBG0 1479 aa6.41□□□□□ -1.38
USP34-202ENST00000411912 ABCC8Q09428 1581 aa6.41□□□□□ -1.38
USP34-202ENST00000411912 WRNQ14191 1432 aaPredicted RBP eCLIP6.37□□□□□ -1.39
USP34-202ENST00000411912 CUX2O14529 1486 aa6.37□□□□□ -1.39
USP34-202ENST00000411912 FBLN2P98095 1184 aa6.34□□□□□ -1.39
USP34-202ENST00000411912 KIF21AQ7Z4S6 1674 aa6.34□□□□□ -1.39
USP34-202ENST00000411912 SOGA1O94964 1423 aa6.33□□□□□ -1.4
USP34-202ENST00000411912 TOPBP1Q92547 1522 aa6.32□□□□□ -1.4
USP34-202ENST00000411912 DNMBPQ6XZF7 1577 aa6.32□□□□□ -1.4
USP34-202ENST00000411912 PRDM2Q13029 1718 aa6.31□□□□□ -1.4
USP34-202ENST00000411912 IFT140Q96RY7 1462 aa6.31□□□□□ -1.4
USP34-202ENST00000411912 WDR62O43379 1518 aa6.31□□□□□ -1.4
USP34-202ENST00000411912 ERICH6Q7L0X2 663 aa6.3□□□□□ -1.4
USP34-202ENST00000411912 FAM9AQ8IZU1 332 aaPredicted RBP6.3□□□□□ -1.4
USP34-202ENST00000411912 URB2Q14146 1524 aaKnown RBP6.3□□□□□ -1.4
USP34-202ENST00000411912 FGD5Q6ZNL6 1462 aa6.29□□□□□ -1.4
USP34-202ENST00000411912 CHMP7Q8WUX9 453 aaPredicted RBP6.29□□□□□ -1.4
USP34-202ENST00000411912 THOC2Q8NI27 1593 aaKnown RBP6.28□□□□□ -1.4
USP34-202ENST00000411912 TDRD9Q8NDG6 1382 aaKnown RBP6.28□□□□□ -1.4
USP34-202ENST00000411912 POLA1P09884 1462 aaPredicted RBP6.27□□□□□ -1.41
USP34-202ENST00000411912 KIF27Q86VH2 1401 aa6.27□□□□□ -1.41
USP34-202ENST00000411912 CUX1P39880 1505 aa6.26□□□□□ -1.41
USP34-202ENST00000411912 CHIC1Q5VXU3 224 aa6.26□□□□□ -1.41
USP34-202ENST00000411912 RAD54L2Q9Y4B4 1467 aa6.26□□□□□ -1.41
USP34-202ENST00000411912 TOP2BQ02880 1626 aa6.24□□□□□ -1.41
USP34-202ENST00000411912 GAPVD1Q14C86 1478 aa6.24□□□□□ -1.41
USP34-202ENST00000411912 AQRO60306 1485 aaKnown RBP eCLIP6.23□□□□□ -1.417e-7■■■■□ 24.3
USP34-202ENST00000411912 OSCARQ8IYS5 282 aa6.23□□□□□ -1.41
USP34-202ENST00000411912 EHMT2Q96KQ7 1210 aa6.23□□□□□ -1.41
USP34-202ENST00000411912 GRIN2BQ13224 1484 aa6.23□□□□□ -1.41
USP34-202ENST00000411912 SYNJ1O43426 1573 aa6.22□□□□□ -1.41
USP34-202ENST00000411912 UBTFP17480 764 aaKnown RBP6.22□□□□□ -1.41
USP34-202ENST00000411912 ABCA10Q8WWZ4 1543 aa6.21□□□□□ -1.42
USP34-202ENST00000411912 EEA1Q15075 1411 aa6.21□□□□□ -1.42
USP34-202ENST00000411912 CSRNP3Q8WYN3 585 aa6.21□□□□□ -1.42
USP34-202ENST00000411912 ZNF608Q9ULD9 1512 aaPredicted RBP6.2□□□□□ -1.42
USP34-202ENST00000411912 BIVM-ERCC5R4GMW8 1640 aa6.2□□□□□ -1.42
USP34-202ENST00000411912 SNAPC4Q5SXM2 1469 aa6.18□□□□□ -1.42
USP34-202ENST00000411912 MAGI1Q96QZ7 1491 aaPredicted RBP6.18□□□□□ -1.42
USP34-202ENST00000411912 RANGAP1P46060 587 aaPredicted RBP6.18□□□□□ -1.42
USP34-202ENST00000411912 WDR97A6NE52 1622 aa6.18□□□□□ -1.42
USP34-202ENST00000411912 CARMIL1Q5VZK9 1371 aa6.18□□□□□ -1.42
USP34-202ENST00000411912 EIF4G3O43432 1585 aaKnown RBP6.18□□□□□ -1.42
USP34-202ENST00000411912 FHAD1B1AJZ9 1412 aa6.17□□□□□ -1.42
USP34-202ENST00000411912 SYNJ2O15056 1496 aa6.16□□□□□ -1.42
USP34-202ENST00000411912 TARBP1Q13395 1621 aaKnown RBP6.15□□□□□ -1.42
USP34-202ENST00000411912 ERICH3Q5RHP9 1530 aa6.15□□□□□ -1.43
USP34-202ENST00000411912 IGF1RP08069 1367 aa6.14□□□□□ -1.43
USP34-202ENST00000411912 AEBP2Q6ZN18 517 aaPredicted RBP6.13□□□□□ -1.43
USP34-202ENST00000411912 RAPGEF2Q9Y4G8 1499 aa6.13□□□□□ -1.43
USP34-202ENST00000411912 NPM1P06748 294 aaKnown RBP eCLIP6.13□□□□□ -1.43
USP34-202ENST00000411912 ATP1B4Q9UN42 357 aaPredicted RBP6.12□□□□□ -1.43
USP34-202ENST00000411912 CARMIL2Q6F5E8 1435 aa6.11□□□□□ -1.43
USP34-202ENST00000411912 GRIN2AQ12879 1464 aa6.11□□□□□ -1.43
USP34-202ENST00000411912 ABCA5Q8WWZ7 1642 aa6.11□□□□□ -1.43
USP34-202ENST00000411912 CUL7Q14999 1698 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms