Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.5■□□□□ 0.55
LRIF1Q5T3J3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 AC093787.1-201ENST00000450396 207 ntBASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 AL138781.2-201ENST00000617896 1843 ntBASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.49■□□□□ 0.55
LRIF1Q5T3J3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRIF1Q5T3J3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIF1Q5T3J3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms