RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 NISCHQ9Y2I1 1504 aa35.85■■■■□ 3.33
GPC5-201ENST00000377067 HRCP23327 699 aa32.42■■■□□ 2.78
GPC5-201ENST00000377067 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
GPC5-201ENST00000377067 SUPT5HO00267 1087 aaKnown RBP31.99■■■□□ 2.71
GPC5-201ENST00000377067 PPARGC1BQ86YN6 1023 aaKnown RBP31.9■■■□□ 2.7
GPC5-201ENST00000377067 PCGF6Q9BYE7 350 aa31.83■■■□□ 2.69
GPC5-201ENST00000377067 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
GPC5-201ENST00000377067 CHIC1Q5VXU3 224 aa31.4■■■□□ 2.62
GPC5-201ENST00000377067 PELP1Q8IZL8 1130 aaKnown RBP31.2■■■□□ 2.58
GPC5-201ENST00000377067 DCAF1Q9Y4B6 1507 aa30.84■■■□□ 2.53
GPC5-201ENST00000377067 LOC105371045A0A1W2PR82 267 aa30.78■■■□□ 2.52
GPC5-201ENST00000377067 SCAF1Q9H7N4 1312 aaKnown RBP30.76■■■□□ 2.51
GPC5-201ENST00000377067 TRIM26Q12899 539 aaPredicted RBP30.66■■■□□ 2.5
GPC5-201ENST00000377067 ZCCHC6Q5VYS8 1495 aaKnown RBP30.51■■■□□ 2.47
GPC5-201ENST00000377067 CCDC180Q9P1Z9 1646 aa30.45■■■□□ 2.47
GPC5-201ENST00000377067 ZEB1P37275 1124 aaPredicted RBP30.36■■■□□ 2.45
GPC5-201ENST00000377067 DCAF8L2P0C7V8 631 aa30.15■■■□□ 2.42
GPC5-201ENST00000377067 ACIN1Q9UKV3 1341 aaKnown RBP29.94■■■□□ 2.38
GPC5-201ENST00000377067 MYT1Q01538 1121 aa29.92■■■□□ 2.38
GPC5-201ENST00000377067 NEUROD1Q13562 356 aa29.91■■■□□ 2.38
GPC5-201ENST00000377067 GTF3C3Q9Y5Q9 886 aa29.75■■■□□ 2.35
GPC5-201ENST00000377067 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
GPC5-201ENST00000377067 EHMT2Q96KQ7 1210 aa29.61■■■□□ 2.33
GPC5-201ENST00000377067 CENPBP07199 599 aaPredicted RBP29.51■■■□□ 2.31
GPC5-201ENST00000377067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.49■■■□□ 2.31
GPC5-201ENST00000377067 TRIM41Q8WV44 630 aa29.48■■■□□ 2.31
GPC5-201ENST00000377067 DIEXFQ68CQ4 756 aaKnown RBP29.42■■■□□ 2.3
GPC5-201ENST00000377067 CCER1Q8TC90 406 aaPredicted RBP29.39■■■□□ 2.3
GPC5-201ENST00000377067 YTHDC1Q96MU7 727 aaKnown RBP29.07■■■□□ 2.24
GPC5-201ENST00000377067 ABCC9O60706 1549 aa29■■■□□ 2.23
GPC5-201ENST00000377067 RSF1Q96T23 1441 aaPredicted RBP28.96■■■□□ 2.23
GPC5-201ENST00000377067 TTBK1Q5TCY1 1321 aaPredicted RBP28.91■■■□□ 2.22
GPC5-201ENST00000377067 RB1CC1Q8TDY2 1594 aa28.89■■■□□ 2.21
GPC5-201ENST00000377067 ZNF316A6NFI3 1004 aaPredicted RBP28.81■■■□□ 2.2
GPC5-201ENST00000377067 MIER1Q8N108 512 aa28.7■■■□□ 2.19
GPC5-201ENST00000377067 SCRIBQ14160 1630 aa28.48■■■□□ 2.15
GPC5-201ENST00000377067 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
GPC5-201ENST00000377067 SUPT16HQ9Y5B9 1047 aaKnown RBP28.27■■■□□ 2.12
GPC5-201ENST00000377067 CEP162Q5TB80 1403 aa28.25■■■□□ 2.11
GPC5-201ENST00000377067 BCL11AQ9H165 835 aa28.24■■■□□ 2.11
GPC5-201ENST00000377067 ANP32EQ9BTT0 268 aa28.22■■■□□ 2.11
GPC5-201ENST00000377067 HNRNPUL2Q1KMD3 747 aaKnown RBP28.2■■■□□ 2.1
GPC5-201ENST00000377067 TSHZ2Q9NRE2 1034 aa28.18■■■□□ 2.1
GPC5-201ENST00000377067 CECR2Q9BXF3 1484 aa28.17■■■□□ 2.1
GPC5-201ENST00000377067 MROH2BQ7Z745 1585 aa28.1■■■□□ 2.09
GPC5-201ENST00000377067 CLSPNQ9HAW4 1339 aa28.01■■■□□ 2.07
GPC5-201ENST00000377067 WIZO95785 1651 aa28.01■■■□□ 2.07
GPC5-201ENST00000377067 UBTFP17480 764 aaKnown RBP28.01■■■□□ 2.07
GPC5-201ENST00000377067 TNIKQ9UKE5 1360 aa27.99■■■□□ 2.07
GPC5-201ENST00000377067 CSRNP3Q8WYN3 585 aa27.99■■■□□ 2.07
GPC5-201ENST00000377067 CCDC88BA6NC98 1476 aa27.99■■■□□ 2.07
GPC5-201ENST00000377067 ABCC8Q09428 1581 aa27.94■■■□□ 2.06
GPC5-201ENST00000377067 SOGA1O94964 1423 aa27.93■■■□□ 2.06
GPC5-201ENST00000377067 EIF4G1Q04637 1599 aaKnown RBP27.91■■■□□ 2.06
GPC5-201ENST00000377067 BCANQ96GW7 911 aa27.8■■■□□ 2.04
GPC5-201ENST00000377067 RUSC2Q8N2Y8 1516 aa27.77■■■□□ 2.04
GPC5-201ENST00000377067 BAZ1AQ9NRL2 1556 aaPredicted RBP27.71■■■□□ 2.03
GPC5-201ENST00000377067 KCNH8Q96L42 1107 aa27.63■■■□□ 2.01
GPC5-201ENST00000377067 GOLGA3Q08378 1498 aa27.63■■■□□ 2.01
GPC5-201ENST00000377067 EEA1Q15075 1411 aa27.57■■■□□ 2
GPC5-201ENST00000377067 FKBP8Q14318 412 aa27.56■■■□□ 2
GPC5-201ENST00000377067 APLP2Q06481 763 aa27.54■■■□□ 2
GPC5-201ENST00000377067 DHX57Q6P158 1386 aaKnown RBP27.52■■■□□ 2
GPC5-201ENST00000377067 RBM19Q9Y4C8 960 aaKnown RBP27.5■■□□□ 1.99
GPC5-201ENST00000377067 RANGAP1P46060 587 aaPredicted RBP27.49■■□□□ 1.99
GPC5-201ENST00000377067 NACADO15069 1562 aa27.49■■□□□ 1.99
GPC5-201ENST00000377067 CLIP1P30622 1438 aa27.47■■□□□ 1.99
GPC5-201ENST00000377067 VPS8Q8N3P4 1428 aa27.42■■□□□ 1.98
GPC5-201ENST00000377067 TOP2AP11388 1531 aaKnown RBP27.37■■□□□ 1.97
GPC5-201ENST00000377067 ITGAEP38570 1179 aa27.36■■□□□ 1.97
GPC5-201ENST00000377067 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
GPC5-201ENST00000377067 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
GPC5-201ENST00000377067 MSH5O43196 834 aa27.29■■□□□ 1.96
GPC5-201ENST00000377067 NEFLP07196 543 aa27.27■■□□□ 1.96
GPC5-201ENST00000377067 PRKCSHP14314 528 aaPredicted RBP27.23■■□□□ 1.95
GPC5-201ENST00000377067 DDX10Q13206 875 aaKnown RBP27.17■■□□□ 1.94
GPC5-201ENST00000377067 KIF21BO75037 1637 aa27.16■■□□□ 1.94
GPC5-201ENST00000377067 TRIM52Q96A61 297 aa27.15■■□□□ 1.94
GPC5-201ENST00000377067 RAPGEF2Q9Y4G8 1499 aa27.13■■□□□ 1.93
GPC5-201ENST00000377067 KANK4Q5T7N3 995 aaPredicted RBP27.11■■□□□ 1.93
GPC5-201ENST00000377067 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
GPC5-201ENST00000377067 ERICH6Q7L0X2 663 aa27.03■■□□□ 1.92
GPC5-201ENST00000377067 BAZ1BQ9UIG0 1483 aaKnown RBP27.01■■□□□ 1.91
GPC5-201ENST00000377067 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
GPC5-201ENST00000377067 HIRIP3Q9BW71 556 aaPredicted RBP26.95■■□□□ 1.9
GPC5-201ENST00000377067 FANCIQ9NVI1 1328 aa26.93■■□□□ 1.9
GPC5-201ENST00000377067 IRX6P78412 446 aaPredicted RBP26.9■■□□□ 1.9
GPC5-201ENST00000377067 PPP1R15AO75807 674 aaPredicted RBP26.9■■□□□ 1.9
GPC5-201ENST00000377067 RRBP1Q9P2E9 1410 aaKnown RBP26.9■■□□□ 1.9
GPC5-201ENST00000377067 CUX2O14529 1486 aa26.85■■□□□ 1.89
GPC5-201ENST00000377067 SIN3AQ96ST3 1273 aa26.85■■□□□ 1.89
GPC5-201ENST00000377067 CDK11AQ9UQ88 783 aaPredicted RBP26.85■■□□□ 1.89
GPC5-201ENST00000377067 CCNB3Q8WWL7 1395 aa26.84■■□□□ 1.89
GPC5-201ENST00000377067 ARAP1Q96P48 1450 aa26.84■■□□□ 1.89
GPC5-201ENST00000377067 RAB3GAP2Q9H2M9 1393 aa26.84■■□□□ 1.89
GPC5-201ENST00000377067 MAPKBP1O60336 1514 aa26.84■■□□□ 1.89
GPC5-201ENST00000377067 ANP32CO43423 234 aa26.83■■□□□ 1.89
GPC5-201ENST00000377067 WDR97A6NE52 1622 aa26.83■■□□□ 1.89
GPC5-201ENST00000377067 CCER2I3L3R5 266 aa26.81■■□□□ 1.88
GPC5-201ENST00000377067 DEKP35659 375 aaKnown RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms