RNA–Protein interactions for RNA: ENST00000404574.5

SMTN-204, Transcript of smoothelin, humanhuman

TSL 2 BASIC

Gene SMTN, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-204ENST00000404574 NISCHQ9Y2I1 1504 aa45.77■■■■■ 4.92
SMTN-204ENST00000404574 CCDC180Q9P1Z9 1646 aa40.18■■■■■ 4.02
SMTN-204ENST00000404574 ABCC9O60706 1549 aa38.54■■■■□ 3.76
SMTN-204ENST00000404574 ZCCHC6Q5VYS8 1495 aaKnown RBP38.3■■■■□ 3.72
SMTN-204ENST00000404574 DCAF8L2P0C7V8 631 aa38.07■■■■□ 3.68
SMTN-204ENST00000404574 DCAF1Q9Y4B6 1507 aa37.87■■■■□ 3.65
SMTN-204ENST00000404574 MYO15BQ96JP2 1530 aa37.66■■■■□ 3.62
SMTN-204ENST00000404574 NACADO15069 1562 aa37.61■■■■□ 3.61
SMTN-204ENST00000404574 RB1CC1Q8TDY2 1594 aa37.43■■■■□ 3.58
SMTN-204ENST00000404574 SHROOM4Q9ULL8 1493 aa36.88■■■■□ 3.5
SMTN-204ENST00000404574 SCRIBQ14160 1630 aa36.84■■■■□ 3.49
SMTN-204ENST00000404574 UNC13AQ9UPW8 1703 aa36.51■■■■□ 3.44
SMTN-204ENST00000404574 PABPN1Q86U42 306 aaKnown RBP eCLIP36.23■■■■□ 3.393e-10■■■■□ 19.6
SMTN-204ENST00000404574 BICRAQ9NZM4 1560 aa36.21■■■■□ 3.39
SMTN-204ENST00000404574 CECR2Q9BXF3 1484 aa35.57■■■■□ 3.28
SMTN-204ENST00000404574 BAZ1AQ9NRL2 1556 aaPredicted RBP35.42■■■■□ 3.26
SMTN-204ENST00000404574 MROH2BQ7Z745 1585 aa35.3■■■■□ 3.24
SMTN-204ENST00000404574 SMARCA4P51532 1647 aa35.28■■■■□ 3.24
SMTN-204ENST00000404574 RSF1Q96T23 1441 aaPredicted RBP35.27■■■■□ 3.24
SMTN-204ENST00000404574 SUPT5HO00267 1087 aaKnown RBP35.24■■■■□ 3.23
SMTN-204ENST00000404574 EIF4G1Q04637 1599 aaKnown RBP35.22■■■■□ 3.23
SMTN-204ENST00000404574 WIZO95785 1651 aa34.96■■■■□ 3.19
SMTN-204ENST00000404574 PEG3Q9GZU2 1588 aa34.9■■■■□ 3.18
SMTN-204ENST00000404574 ATAD2BQ9ULI0 1458 aa34.88■■■■□ 3.17
SMTN-204ENST00000404574 SMARCA2P51531 1590 aa34.88■■■■□ 3.17
SMTN-204ENST00000404574 CC2D2AQ9P2K1 1620 aa34.84■■■■□ 3.17
SMTN-204ENST00000404574 NCAPD3P42695 1498 aa34.71■■■■□ 3.15
SMTN-204ENST00000404574 BAZ1BQ9UIG0 1483 aaKnown RBP34.68■■■■□ 3.14
SMTN-204ENST00000404574 TOP2AP11388 1531 aaKnown RBP34.63■■■■□ 3.13
SMTN-204ENST00000404574 HMGXB3Q12766 1538 aa34.6■■■■□ 3.13
SMTN-204ENST00000404574 DNAJC5BQ9UF47 199 aa34.5■■■■□ 3.11
SMTN-204ENST00000404574 CCDC88BA6NC98 1476 aa34.26■■■■□ 3.08
SMTN-204ENST00000404574 CADPSQ9ULU8 1353 aa33.8■■■■□ 3
SMTN-204ENST00000404574 CFTRP13569 1480 aa33.76■■■□□ 2.99
SMTN-204ENST00000404574 LAMC3Q9Y6N6 1575 aa33.63■■■□□ 2.97
SMTN-204ENST00000404574 NESP48681 1621 aa33.61■■■□□ 2.97
SMTN-204ENST00000404574 PRDM2Q13029 1718 aa33.48■■■□□ 2.95
SMTN-204ENST00000404574 PDS5BQ9NTI5 1447 aa33.44■■■□□ 2.94
SMTN-204ENST00000404574 FANCD2Q9BXW9 1451 aa33.4■■■□□ 2.94
SMTN-204ENST00000404574 CHIC1Q5VXU3 224 aa33.39■■■□□ 2.94
SMTN-204ENST00000404574 ABCC8Q09428 1581 aa33.3■■■□□ 2.92
SMTN-204ENST00000404574 CEP164Q9UPV0 1460 aa33.26■■■□□ 2.92
SMTN-204ENST00000404574 WRNQ14191 1432 aaPredicted RBP eCLIP33.25■■■□□ 2.91
SMTN-204ENST00000404574 TRIM41Q8WV44 630 aa33.22■■■□□ 2.91
SMTN-204ENST00000404574 ERCC6Q03468 1493 aa33.17■■■□□ 2.9
SMTN-204ENST00000404574 KIF21AQ7Z4S6 1674 aa33.17■■■□□ 2.9
SMTN-204ENST00000404574 SYNJ1O43426 1573 aa33.05■■■□□ 2.88
SMTN-204ENST00000404574 CUX1P39880 1505 aa33.05■■■□□ 2.88
SMTN-204ENST00000404574 TOP2BQ02880 1626 aa33.01■■■□□ 2.87
SMTN-204ENST00000404574 MRC2Q9UBG0 1479 aa32.99■■■□□ 2.87
SMTN-204ENST00000404574 DNMBPQ6XZF7 1577 aa32.97■■■□□ 2.87
SMTN-204ENST00000404574 URB2Q14146 1524 aaKnown RBP32.97■■■□□ 2.87
SMTN-204ENST00000404574 BIVM-ERCC5R4GMW8 1640 aa32.96■■■□□ 2.87
SMTN-204ENST00000404574 TOPBP1Q92547 1522 aa32.95■■■□□ 2.87
SMTN-204ENST00000404574 WDR62O43379 1518 aa32.81■■■□□ 2.84
SMTN-204ENST00000404574 FGD5Q6ZNL6 1462 aa32.81■■■□□ 2.84
SMTN-204ENST00000404574 THOC2Q8NI27 1593 aaKnown RBP32.81■■■□□ 2.84
SMTN-204ENST00000404574 POLA1P09884 1462 aaPredicted RBP32.74■■■□□ 2.83
SMTN-204ENST00000404574 SOGA1O94964 1423 aa32.68■■■□□ 2.82
SMTN-204ENST00000404574 RAD54L2Q9Y4B4 1467 aa32.61■■■□□ 2.81
SMTN-204ENST00000404574 CUX2O14529 1486 aa32.55■■■□□ 2.8
SMTN-204ENST00000404574 FAM9AQ8IZU1 332 aaPredicted RBP32.54■■■□□ 2.8
SMTN-204ENST00000404574 ABCA10Q8WWZ4 1543 aa32.52■■■□□ 2.8
SMTN-204ENST00000404574 IFT140Q96RY7 1462 aa32.51■■■□□ 2.8
SMTN-204ENST00000404574 EEA1Q15075 1411 aa32.5■■■□□ 2.79
SMTN-204ENST00000404574 KIF27Q86VH2 1401 aa32.49■■■□□ 2.79
SMTN-204ENST00000404574 TARBP1Q13395 1621 aaKnown RBP32.47■■■□□ 2.79
SMTN-204ENST00000404574 RUSC2Q8N2Y8 1516 aa32.46■■■□□ 2.79
SMTN-204ENST00000404574 WDR97A6NE52 1622 aa32.39■■■□□ 2.78
SMTN-204ENST00000404574 TDRD9Q8NDG6 1382 aaKnown RBP32.38■■■□□ 2.77
SMTN-204ENST00000404574 CSRNP3Q8WYN3 585 aa32.37■■■□□ 2.77
SMTN-204ENST00000404574 GAPVD1Q14C86 1478 aa32.29■■■□□ 2.76
SMTN-204ENST00000404574 ZNF608Q9ULD9 1512 aaPredicted RBP32.29■■■□□ 2.76
SMTN-204ENST00000404574 AQRO60306 1485 aaKnown RBP eCLIP32.26■■■□□ 2.766e-8■■■■■ 63.8
SMTN-204ENST00000404574 ABCA5Q8WWZ7 1642 aa32.26■■■□□ 2.76
SMTN-204ENST00000404574 IGF1RP08069 1367 aa32.23■■■□□ 2.75
SMTN-204ENST00000404574 EIF4G3O43432 1585 aaKnown RBP32.17■■■□□ 2.74
SMTN-204ENST00000404574 ERICH3Q5RHP9 1530 aa32.15■■■□□ 2.74
SMTN-204ENST00000404574 GRIN2BQ13224 1484 aa32.14■■■□□ 2.74
SMTN-204ENST00000404574 EHMT2Q96KQ7 1210 aa32.09■■■□□ 2.73
SMTN-204ENST00000404574 CARMIL1Q5VZK9 1371 aa32.08■■■□□ 2.73
SMTN-204ENST00000404574 PBRM1Q86U86 1689 aa32.08■■■□□ 2.73
SMTN-204ENST00000404574 LOC105371045A0A1W2PR82 267 aa32.07■■■□□ 2.72
SMTN-204ENST00000404574 PRXQ9BXM0 1461 aa32.06■■■□□ 2.72
SMTN-204ENST00000404574 CUL7Q14999 1698 aa32.02■■■□□ 2.72
SMTN-204ENST00000404574 KIF21BO75037 1637 aa32.02■■■□□ 2.72
SMTN-204ENST00000404574 GOLGA3Q08378 1498 aa31.98■■■□□ 2.71
SMTN-204ENST00000404574 RAPGEF2Q9Y4G8 1499 aa31.97■■■□□ 2.71
SMTN-204ENST00000404574 SNAPC4Q5SXM2 1469 aa31.96■■■□□ 2.71
SMTN-204ENST00000404574 FHAD1B1AJZ9 1412 aa31.95■■■□□ 2.71
SMTN-204ENST00000404574 MAGI1Q96QZ7 1491 aaPredicted RBP31.94■■■□□ 2.7
SMTN-204ENST00000404574 UBTFP17480 764 aaKnown RBP31.92■■■□□ 2.7
SMTN-204ENST00000404574 ADAMTS12P58397 1594 aa31.9■■■□□ 2.7
SMTN-204ENST00000404574 CHMP7Q8WUX9 453 aaPredicted RBP31.83■■■□□ 2.69
SMTN-204ENST00000404574 SYNJ2O15056 1496 aa31.81■■■□□ 2.68
SMTN-204ENST00000404574 FBLN2P98095 1184 aa31.8■■■□□ 2.68
SMTN-204ENST00000404574 TNIKQ9UKE5 1360 aa31.77■■■□□ 2.68
SMTN-204ENST00000404574 GRIN2AQ12879 1464 aa31.72■■■□□ 2.67
SMTN-204ENST00000404574 CHD1O14646 1710 aa31.56■■■□□ 2.64
SMTN-204ENST00000404574 RANGAP1P46060 587 aaPredicted RBP31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms