RNA–Protein interactions for RNA: ENST00000616558.4

SYTL1-210, Transcript of synaptotagmin like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYTL1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYTL1-210ENST00000616558 NISCHQ9Y2I1 1504 aa43.86■■■■■ 4.61
SYTL1-210ENST00000616558 CCDC180Q9P1Z9 1646 aa38.2■■■■□ 3.71
SYTL1-210ENST00000616558 ZCCHC6Q5VYS8 1495 aaKnown RBP36.83■■■■□ 3.49
SYTL1-210ENST00000616558 DCAF8L2P0C7V8 631 aa36.49■■■■□ 3.43
SYTL1-210ENST00000616558 ABCC9O60706 1549 aa36.31■■■■□ 3.4
SYTL1-210ENST00000616558 DCAF1Q9Y4B6 1507 aa36.14■■■■□ 3.38
SYTL1-210ENST00000616558 SHROOM4Q9ULL8 1493 aa36.03■■■■□ 3.36
SYTL1-210ENST00000616558 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
SYTL1-210ENST00000616558 NACADO15069 1562 aa35.57■■■■□ 3.29
SYTL1-210ENST00000616558 RB1CC1Q8TDY2 1594 aa35.32■■■■□ 3.24
SYTL1-210ENST00000616558 SCRIBQ14160 1630 aa35.3■■■■□ 3.24
SYTL1-210ENST00000616558 UNC13AQ9UPW8 1703 aa34.71■■■■□ 3.15
SYTL1-210ENST00000616558 SUPT5HO00267 1087 aaKnown RBP34.65■■■■□ 3.14
SYTL1-210ENST00000616558 PABPN1Q86U42 306 aaKnown RBP eCLIP34.28■■■■□ 3.083e-6■■□□□ 12.4
SYTL1-210ENST00000616558 BICRAQ9NZM4 1560 aa34.27■■■■□ 3.08
SYTL1-210ENST00000616558 CECR2Q9BXF3 1484 aa34.16■■■■□ 3.06
SYTL1-210ENST00000616558 RSF1Q96T23 1441 aaPredicted RBP34.05■■■■□ 3.04
SYTL1-210ENST00000616558 MROH2BQ7Z745 1585 aa33.95■■■■□ 3.03
SYTL1-210ENST00000616558 BAZ1AQ9NRL2 1556 aaPredicted RBP33.86■■■■□ 3.01
SYTL1-210ENST00000616558 SMARCA4P51532 1647 aa33.75■■■□□ 2.99
SYTL1-210ENST00000616558 WIZO95785 1651 aa33.72■■■□□ 2.99
SYTL1-210ENST00000616558 TOP2AP11388 1531 aaKnown RBP33.26■■■□□ 2.92
SYTL1-210ENST00000616558 EIF4G1Q04637 1599 aaKnown RBP33.25■■■□□ 2.91
SYTL1-210ENST00000616558 PEG3Q9GZU2 1588 aa33.23■■■□□ 2.91
SYTL1-210ENST00000616558 ATAD2BQ9ULI0 1458 aa33.16■■■□□ 2.9
SYTL1-210ENST00000616558 SMARCA2P51531 1590 aa33.13■■■□□ 2.89
SYTL1-210ENST00000616558 CHIC1Q5VXU3 224 aa33.04■■■□□ 2.88
SYTL1-210ENST00000616558 BAZ1BQ9UIG0 1483 aaKnown RBP33.02■■■□□ 2.88
SYTL1-210ENST00000616558 CCDC88BA6NC98 1476 aa32.97■■■□□ 2.87
SYTL1-210ENST00000616558 NCAPD3P42695 1498 aa32.82■■■□□ 2.84
SYTL1-210ENST00000616558 CC2D2AQ9P2K1 1620 aa32.8■■■□□ 2.84
SYTL1-210ENST00000616558 HMGXB3Q12766 1538 aa32.78■■■□□ 2.84
SYTL1-210ENST00000616558 TRIM41Q8WV44 630 aa32.5■■■□□ 2.79
SYTL1-210ENST00000616558 ABCC8Q09428 1581 aa32.37■■■□□ 2.77
SYTL1-210ENST00000616558 CFTRP13569 1480 aa32.12■■■□□ 2.73
SYTL1-210ENST00000616558 WRNQ14191 1432 aaPredicted RBP eCLIP32.07■■■□□ 2.72
SYTL1-210ENST00000616558 DNAJC5BQ9UF47 199 aa32.06■■■□□ 2.72
SYTL1-210ENST00000616558 FAM9AQ8IZU1 332 aaPredicted RBP32.03■■■□□ 2.72
SYTL1-210ENST00000616558 CADPSQ9ULU8 1353 aa32.03■■■□□ 2.72
SYTL1-210ENST00000616558 PRDM2Q13029 1718 aa32.01■■■□□ 2.71
SYTL1-210ENST00000616558 SYNJ1O43426 1573 aa31.97■■■□□ 2.71
SYTL1-210ENST00000616558 LOC105371045A0A1W2PR82 267 aa31.9■■■□□ 2.7
SYTL1-210ENST00000616558 NESP48681 1621 aa31.87■■■□□ 2.69
SYTL1-210ENST00000616558 TOP2BQ02880 1626 aa31.78■■■□□ 2.68
SYTL1-210ENST00000616558 LAMC3Q9Y6N6 1575 aa31.75■■■□□ 2.67
SYTL1-210ENST00000616558 BIVM-ERCC5R4GMW8 1640 aa31.75■■■□□ 2.67
SYTL1-210ENST00000616558 CUX1P39880 1505 aa31.74■■■□□ 2.67
SYTL1-210ENST00000616558 SOGA1O94964 1423 aa31.73■■■□□ 2.67
SYTL1-210ENST00000616558 FANCD2Q9BXW9 1451 aa31.72■■■□□ 2.67
SYTL1-210ENST00000616558 EHMT2Q96KQ7 1210 aa31.7■■■□□ 2.67
SYTL1-210ENST00000616558 RUSC2Q8N2Y8 1516 aa31.63■■■□□ 2.65
SYTL1-210ENST00000616558 CEP164Q9UPV0 1460 aa31.52■■■□□ 2.64
SYTL1-210ENST00000616558 EEA1Q15075 1411 aa31.52■■■□□ 2.64
SYTL1-210ENST00000616558 PDS5BQ9NTI5 1447 aa31.51■■■□□ 2.63
SYTL1-210ENST00000616558 KIF21AQ7Z4S6 1674 aa31.48■■■□□ 2.63
SYTL1-210ENST00000616558 CSRNP3Q8WYN3 585 aa31.45■■■□□ 2.63
SYTL1-210ENST00000616558 DNMBPQ6XZF7 1577 aa31.41■■■□□ 2.62
SYTL1-210ENST00000616558 FGD5Q6ZNL6 1462 aa31.39■■■□□ 2.62
SYTL1-210ENST00000616558 TOPBP1Q92547 1522 aa31.37■■■□□ 2.61
SYTL1-210ENST00000616558 URB2Q14146 1524 aaKnown RBP31.33■■■□□ 2.61
SYTL1-210ENST00000616558 KIF27Q86VH2 1401 aa31.24■■■□□ 2.59
SYTL1-210ENST00000616558 POLA1P09884 1462 aaPredicted RBP31.22■■■□□ 2.59
SYTL1-210ENST00000616558 CUX2O14529 1486 aa31.21■■■□□ 2.59
SYTL1-210ENST00000616558 RAD54L2Q9Y4B4 1467 aa31.19■■■□□ 2.58
SYTL1-210ENST00000616558 GOLGA3Q08378 1498 aa31.17■■■□□ 2.58
SYTL1-210ENST00000616558 KIF21BO75037 1637 aa31.16■■■□□ 2.58
SYTL1-210ENST00000616558 UBTFP17480 764 aaKnown RBP31.16■■■□□ 2.58
SYTL1-210ENST00000616558 MRC2Q9UBG0 1479 aa31.12■■■□□ 2.57
SYTL1-210ENST00000616558 ERCC6Q03468 1493 aa31.11■■■□□ 2.57
SYTL1-210ENST00000616558 RAPGEF2Q9Y4G8 1499 aa31.07■■■□□ 2.56
SYTL1-210ENST00000616558 ABCA10Q8WWZ4 1543 aa31.05■■■□□ 2.56
SYTL1-210ENST00000616558 TNIKQ9UKE5 1360 aa31.04■■■□□ 2.56
SYTL1-210ENST00000616558 PRXQ9BXM0 1461 aa30.99■■■□□ 2.55
SYTL1-210ENST00000616558 WDR97A6NE52 1622 aa30.98■■■□□ 2.55
SYTL1-210ENST00000616558 IGF1RP08069 1367 aa30.95■■■□□ 2.55
SYTL1-210ENST00000616558 CEP162Q5TB80 1403 aa30.94■■■□□ 2.54
SYTL1-210ENST00000616558 WDR62O43379 1518 aa30.93■■■□□ 2.54
SYTL1-210ENST00000616558 ERICH3Q5RHP9 1530 aa30.93■■■□□ 2.54
SYTL1-210ENST00000616558 TARBP1Q13395 1621 aaKnown RBP30.89■■■□□ 2.54
SYTL1-210ENST00000616558 TDRD9Q8NDG6 1382 aaKnown RBP30.89■■■□□ 2.54
SYTL1-210ENST00000616558 THOC2Q8NI27 1593 aaKnown RBP30.88■■■□□ 2.53
SYTL1-210ENST00000616558 CARMIL1Q5VZK9 1371 aa30.83■■■□□ 2.53
SYTL1-210ENST00000616558 ABCA5Q8WWZ7 1642 aa30.82■■■□□ 2.52
SYTL1-210ENST00000616558 RANGAP1P46060 587 aaPredicted RBP30.8■■■□□ 2.52
SYTL1-210ENST00000616558 GAPVD1Q14C86 1478 aa30.79■■■□□ 2.52
SYTL1-210ENST00000616558 IFT140Q96RY7 1462 aa30.72■■■□□ 2.51
SYTL1-210ENST00000616558 CUL7Q14999 1698 aa30.72■■■□□ 2.51
SYTL1-210ENST00000616558 CLIP1P30622 1438 aa30.7■■■□□ 2.51
SYTL1-210ENST00000616558 AQRO60306 1485 aaKnown RBP eCLIP30.69■■■□□ 2.56e-7■■■■□ 25.4
SYTL1-210ENST00000616558 PBRM1Q86U86 1689 aa30.65■■■□□ 2.5
SYTL1-210ENST00000616558 ZNF608Q9ULD9 1512 aaPredicted RBP30.65■■■□□ 2.5
SYTL1-210ENST00000616558 EIF4G3O43432 1585 aaKnown RBP30.53■■■□□ 2.48
SYTL1-210ENST00000616558 GRIN2BQ13224 1484 aa30.52■■■□□ 2.48
SYTL1-210ENST00000616558 PPARGC1BQ86YN6 1023 aaKnown RBP30.51■■■□□ 2.47
SYTL1-210ENST00000616558 PCGF6Q9BYE7 350 aa30.44■■■□□ 2.46
SYTL1-210ENST00000616558 ADAMTS12P58397 1594 aa30.44■■■□□ 2.46
SYTL1-210ENST00000616558 CTTNBP2Q8WZ74 1663 aa30.44■■■□□ 2.46
SYTL1-210ENST00000616558 FHAD1B1AJZ9 1412 aa30.42■■■□□ 2.46
SYTL1-210ENST00000616558 VPS8Q8N3P4 1428 aa30.39■■■□□ 2.46
SYTL1-210ENST00000616558 ARAP1Q96P48 1450 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms