RNA–Protein interactions for RNA: ENST00000371601.4

NPDC1-202, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPDC1, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-202ENST00000371601 NISCHQ9Y2I1 1504 aa49.44■■■■■ 5.51
NPDC1-202ENST00000371601 CCDC180Q9P1Z9 1646 aa43.75■■■■■ 4.59
NPDC1-202ENST00000371601 ABCC9O60706 1549 aa43.19■■■■■ 4.5
NPDC1-202ENST00000371601 DCAF8L2P0C7V8 631 aa41.8■■■■■ 4.28
NPDC1-202ENST00000371601 RB1CC1Q8TDY2 1594 aa41.36■■■■■ 4.21
NPDC1-202ENST00000371601 NACADO15069 1562 aa41.29■■■■■ 4.2
NPDC1-202ENST00000371601 ZCCHC6Q5VYS8 1495 aaKnown RBP41.1■■■■■ 4.17
NPDC1-202ENST00000371601 MYO15BQ96JP2 1530 aa40.96■■■■■ 4.15
NPDC1-202ENST00000371601 DCAF1Q9Y4B6 1507 aa40.78■■■■■ 4.12
NPDC1-202ENST00000371601 PABPN1Q86U42 306 aaKnown RBP eCLIP40.53■■■■■ 4.088e-6■□□□□ 8.9
NPDC1-202ENST00000371601 UNC13AQ9UPW8 1703 aa40.25■■■■■ 4.03
NPDC1-202ENST00000371601 SCRIBQ14160 1630 aa40.12■■■■■ 4.01
NPDC1-202ENST00000371601 BICRAQ9NZM4 1560 aa40.06■■■■■ 4
NPDC1-202ENST00000371601 DNAJC5BQ9UF47 199 aa39.79■■■■□ 3.96
NPDC1-202ENST00000371601 SHROOM4Q9ULL8 1493 aa39.56■■■■□ 3.92
NPDC1-202ENST00000371601 EIF4G1Q04637 1599 aaKnown RBP39.06■■■■□ 3.84
NPDC1-202ENST00000371601 CC2D2AQ9P2K1 1620 aa38.92■■■■□ 3.82
NPDC1-202ENST00000371601 CECR2Q9BXF3 1484 aa38.78■■■■□ 3.8
NPDC1-202ENST00000371601 SMARCA4P51532 1647 aa38.29■■■■□ 3.72
NPDC1-202ENST00000371601 BAZ1AQ9NRL2 1556 aaPredicted RBP38.29■■■■□ 3.72
NPDC1-202ENST00000371601 ATAD2BQ9ULI0 1458 aa38.21■■■■□ 3.71
NPDC1-202ENST00000371601 NCAPD3P42695 1498 aa38.18■■■■□ 3.7
NPDC1-202ENST00000371601 MROH2BQ7Z745 1585 aa38.13■■■■□ 3.69
NPDC1-202ENST00000371601 SMARCA2P51531 1590 aa38.09■■■■□ 3.69
NPDC1-202ENST00000371601 BAZ1BQ9UIG0 1483 aaKnown RBP37.91■■■■□ 3.66
NPDC1-202ENST00000371601 PEG3Q9GZU2 1588 aa37.86■■■■□ 3.65
NPDC1-202ENST00000371601 HMGXB3Q12766 1538 aa37.86■■■■□ 3.65
NPDC1-202ENST00000371601 RSF1Q96T23 1441 aaPredicted RBP37.74■■■■□ 3.63
NPDC1-202ENST00000371601 WIZO95785 1651 aa37.68■■■■□ 3.62
NPDC1-202ENST00000371601 NESP48681 1621 aa37.32■■■■□ 3.57
NPDC1-202ENST00000371601 ERCC6Q03468 1493 aa37.25■■■■□ 3.55
NPDC1-202ENST00000371601 TOP2AP11388 1531 aaKnown RBP37.23■■■■□ 3.55
NPDC1-202ENST00000371601 CADPSQ9ULU8 1353 aa37.16■■■■□ 3.54
NPDC1-202ENST00000371601 LAMC3Q9Y6N6 1575 aa37.09■■■■□ 3.53
NPDC1-202ENST00000371601 SUPT5HO00267 1087 aaKnown RBP37.07■■■■□ 3.52
NPDC1-202ENST00000371601 PDS5BQ9NTI5 1447 aa37.02■■■■□ 3.52
NPDC1-202ENST00000371601 CCDC88BA6NC98 1476 aa36.94■■■■□ 3.5
NPDC1-202ENST00000371601 CFTRP13569 1480 aa36.84■■■■□ 3.49
NPDC1-202ENST00000371601 CUX2O14529 1486 aa36.72■■■■□ 3.47
NPDC1-202ENST00000371601 KIF21AQ7Z4S6 1674 aa36.7■■■■□ 3.46
NPDC1-202ENST00000371601 FANCD2Q9BXW9 1451 aa36.68■■■■□ 3.46
NPDC1-202ENST00000371601 CEP164Q9UPV0 1460 aa36.61■■■■□ 3.45
NPDC1-202ENST00000371601 THOC2Q8NI27 1593 aaKnown RBP36.56■■■■□ 3.44
NPDC1-202ENST00000371601 MRC2Q9UBG0 1479 aa36.54■■■■□ 3.44
NPDC1-202ENST00000371601 WDR62O43379 1518 aa36.34■■■■□ 3.41
NPDC1-202ENST00000371601 URB2Q14146 1524 aaKnown RBP36.27■■■■□ 3.4
NPDC1-202ENST00000371601 PRDM2Q13029 1718 aa36.26■■■■□ 3.4
NPDC1-202ENST00000371601 ABCC8Q09428 1581 aa36.05■■■■□ 3.36
NPDC1-202ENST00000371601 TOPBP1Q92547 1522 aa36.05■■■■□ 3.36
NPDC1-202ENST00000371601 DNMBPQ6XZF7 1577 aa35.93■■■■□ 3.34
NPDC1-202ENST00000371601 DNAJC5Q9H3Z4 198 aa35.85■■■■□ 3.33
NPDC1-202ENST00000371601 IFT140Q96RY7 1462 aa35.84■■■■□ 3.33
NPDC1-202ENST00000371601 CUX1P39880 1505 aa35.75■■■■□ 3.31
NPDC1-202ENST00000371601 POLA1P09884 1462 aaPredicted RBP35.75■■■■□ 3.31
NPDC1-202ENST00000371601 SOGA1O94964 1423 aa35.73■■■■□ 3.31
NPDC1-202ENST00000371601 ZNF608Q9ULD9 1512 aaPredicted RBP35.72■■■■□ 3.31
NPDC1-202ENST00000371601 RAD54L2Q9Y4B4 1467 aa35.68■■■■□ 3.3
NPDC1-202ENST00000371601 FGD5Q6ZNL6 1462 aa35.66■■■■□ 3.3
NPDC1-202ENST00000371601 AQRO60306 1485 aaKnown RBP eCLIP35.6■■■■□ 3.291e-7■■■■□ 26.4
NPDC1-202ENST00000371601 WRNQ14191 1432 aaPredicted RBP eCLIP35.59■■■■□ 3.29
NPDC1-202ENST00000371601 TDRD9Q8NDG6 1382 aaKnown RBP35.58■■■■□ 3.29
NPDC1-202ENST00000371601 TARBP1Q13395 1621 aaKnown RBP35.56■■■■□ 3.28
NPDC1-202ENST00000371601 OSCARQ8IYS5 282 aa35.47■■■■□ 3.27
NPDC1-202ENST00000371601 EIF4G3O43432 1585 aaKnown RBP35.43■■■■□ 3.26
NPDC1-202ENST00000371601 FBLN2P98095 1184 aa35.39■■■■□ 3.26
NPDC1-202ENST00000371601 SYNJ1O43426 1573 aa35.39■■■■□ 3.26
NPDC1-202ENST00000371601 TOP2BQ02880 1626 aa35.38■■■■□ 3.25
NPDC1-202ENST00000371601 BIVM-ERCC5R4GMW8 1640 aa35.29■■■■□ 3.24
NPDC1-202ENST00000371601 ABCA10Q8WWZ4 1543 aa35.28■■■■□ 3.24
NPDC1-202ENST00000371601 GAPVD1Q14C86 1478 aa35.25■■■■□ 3.23
NPDC1-202ENST00000371601 GRIN2BQ13224 1484 aa35.22■■■■□ 3.23
NPDC1-202ENST00000371601 CHMP7Q8WUX9 453 aaPredicted RBP35.21■■■■□ 3.23
NPDC1-202ENST00000371601 WDR97A6NE52 1622 aa35.19■■■■□ 3.22
NPDC1-202ENST00000371601 SNAPC4Q5SXM2 1469 aa35.17■■■■□ 3.22
NPDC1-202ENST00000371601 MAGI1Q96QZ7 1491 aaPredicted RBP35.07■■■■□ 3.21
NPDC1-202ENST00000371601 ABCA5Q8WWZ7 1642 aa35.04■■■■□ 3.2
NPDC1-202ENST00000371601 SYNJ2O15056 1496 aa34.98■■■■□ 3.19
NPDC1-202ENST00000371601 TRIM41Q8WV44 630 aa34.97■■■■□ 3.19
NPDC1-202ENST00000371601 CHD1O14646 1710 aa34.95■■■■□ 3.19
NPDC1-202ENST00000371601 PBRM1Q86U86 1689 aa34.95■■■■□ 3.19
NPDC1-202ENST00000371601 KIF27Q86VH2 1401 aa34.88■■■■□ 3.17
NPDC1-202ENST00000371601 ERICH3Q5RHP9 1530 aa34.83■■■■□ 3.17
NPDC1-202ENST00000371601 FHAD1B1AJZ9 1412 aa34.83■■■■□ 3.17
NPDC1-202ENST00000371601 IGF1RP08069 1367 aa34.79■■■■□ 3.16
NPDC1-202ENST00000371601 GRIN2AQ12879 1464 aa34.73■■■■□ 3.15
NPDC1-202ENST00000371601 ADAMTS12P58397 1594 aa34.72■■■■□ 3.15
NPDC1-202ENST00000371601 ARHGEF11O15085 1522 aa34.65■■■■□ 3.14
NPDC1-202ENST00000371601 CYB5RLQ6IPT4 315 aa34.64■■■■□ 3.14
NPDC1-202ENST00000371601 CLASP1Q7Z460 1538 aa34.61■■■■□ 3.13
NPDC1-202ENST00000371601 RIMBP3CA6NJZ7 1639 aa34.61■■■■□ 3.13
NPDC1-202ENST00000371601 RIMBP3BA6NNM3 1639 aa34.61■■■■□ 3.13
NPDC1-202ENST00000371601 RIMBP3Q9UFD9 1639 aa34.61■■■■□ 3.13
NPDC1-202ENST00000371601 CARMIL1Q5VZK9 1371 aa34.59■■■■□ 3.13
NPDC1-202ENST00000371601 RUSC2Q8N2Y8 1516 aa34.57■■■■□ 3.12
NPDC1-202ENST00000371601 NUP160Q12769 1436 aa34.56■■■■□ 3.12
NPDC1-202ENST00000371601 CEP170Q5SW79 1584 aa34.51■■■■□ 3.12
NPDC1-202ENST00000371601 CHIC1Q5VXU3 224 aa34.46■■■■□ 3.11
NPDC1-202ENST00000371601 JPH4Q96JJ6 628 aa34.46■■■■□ 3.11
NPDC1-202ENST00000371601 CUL7Q14999 1698 aa34.45■■■■□ 3.1
NPDC1-202ENST00000371601 ARAP1Q96P48 1450 aa34.37■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms