RNA–Protein interactions for RNA: ENST00000330883.8

KCNH2-202, Transcript of potassium voltage-gated channel subfamily H member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNH2, Length 3,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNH2-202ENST00000330883 NISCHQ9Y2I1 1504 aa39.23■■■■□ 3.87
KCNH2-202ENST00000330883 SHROOM4Q9ULL8 1493 aa34.2■■■■□ 3.07
KCNH2-202ENST00000330883 DCAF8L2P0C7V8 631 aa33.77■■■■□ 3
KCNH2-202ENST00000330883 SUPT5HO00267 1087 aaKnown RBP33.59■■■□□ 2.97
KCNH2-202ENST00000330883 ZCCHC6Q5VYS8 1495 aaKnown RBP33.04■■■□□ 2.88
KCNH2-202ENST00000330883 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
KCNH2-202ENST00000330883 CHIC1Q5VXU3 224 aa32.18■■■□□ 2.74
KCNH2-202ENST00000330883 HRCP23327 699 aa31.85■■■□□ 2.69
KCNH2-202ENST00000330883 DCAF1Q9Y4B6 1507 aa31.83■■■□□ 2.69
KCNH2-202ENST00000330883 MYO15BQ96JP2 1530 aa31.79■■■□□ 2.68
KCNH2-202ENST00000330883 PCGF6Q9BYE7 350 aa31.56■■■□□ 2.64
KCNH2-202ENST00000330883 ABCC9O60706 1549 aa31.53■■■□□ 2.64
KCNH2-202ENST00000330883 LOC105371045A0A1W2PR82 267 aa31.51■■■□□ 2.63
KCNH2-202ENST00000330883 SCRIBQ14160 1630 aa31.49■■■□□ 2.63
KCNH2-202ENST00000330883 PPARGC1BQ86YN6 1023 aaKnown RBP31.39■■■□□ 2.62
KCNH2-202ENST00000330883 EHMT2Q96KQ7 1210 aa31.18■■■□□ 2.58
KCNH2-202ENST00000330883 FAM9AQ8IZU1 332 aaPredicted RBP31.18■■■□□ 2.58
KCNH2-202ENST00000330883 RSF1Q96T23 1441 aaPredicted RBP31.16■■■□□ 2.58
KCNH2-202ENST00000330883 TRIM41Q8WV44 630 aa31.12■■■□□ 2.57
KCNH2-202ENST00000330883 CECR2Q9BXF3 1484 aa30.85■■■□□ 2.53
KCNH2-202ENST00000330883 NACADO15069 1562 aa30.79■■■□□ 2.52
KCNH2-202ENST00000330883 RB1CC1Q8TDY2 1594 aa30.73■■■□□ 2.51
KCNH2-202ENST00000330883 MROH2BQ7Z745 1585 aa30.61■■■□□ 2.49
KCNH2-202ENST00000330883 TRIM26Q12899 539 aaPredicted RBP30.54■■■□□ 2.48
KCNH2-202ENST00000330883 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.46
KCNH2-202ENST00000330883 WIZO95785 1651 aa30.38■■■□□ 2.45
KCNH2-202ENST00000330883 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
KCNH2-202ENST00000330883 TTBK1Q5TCY1 1321 aaPredicted RBP30.08■■■□□ 2.41
KCNH2-202ENST00000330883 ZEB1P37275 1124 aaPredicted RBP30.03■■■□□ 2.4
KCNH2-202ENST00000330883 SCAF1Q9H7N4 1312 aaKnown RBP29.92■■■□□ 2.38
KCNH2-202ENST00000330883 CCDC88BA6NC98 1476 aa29.88■■■□□ 2.37
KCNH2-202ENST00000330883 ABCC8Q09428 1581 aa29.85■■■□□ 2.37
KCNH2-202ENST00000330883 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
KCNH2-202ENST00000330883 UBTFP17480 764 aaKnown RBP29.81■■■□□ 2.36
KCNH2-202ENST00000330883 PELP1Q8IZL8 1130 aaKnown RBP29.79■■■□□ 2.36
KCNH2-202ENST00000330883 TOP2AP11388 1531 aaKnown RBP29.77■■■□□ 2.36
KCNH2-202ENST00000330883 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
KCNH2-202ENST00000330883 SOGA1O94964 1423 aa29.65■■■□□ 2.34
KCNH2-202ENST00000330883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.63■■■□□ 2.33
KCNH2-202ENST00000330883 SMARCA2P51531 1590 aa29.63■■■□□ 2.33
KCNH2-202ENST00000330883 CSRNP3Q8WYN3 585 aa29.61■■■□□ 2.33
KCNH2-202ENST00000330883 RANGAP1P46060 587 aaPredicted RBP29.6■■■□□ 2.33
KCNH2-202ENST00000330883 CCER1Q8TC90 406 aaPredicted RBP29.56■■■□□ 2.32
KCNH2-202ENST00000330883 EIF4G1Q04637 1599 aaKnown RBP29.48■■■□□ 2.31
KCNH2-202ENST00000330883 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
KCNH2-202ENST00000330883 RUSC2Q8N2Y8 1516 aa29.47■■■□□ 2.31
KCNH2-202ENST00000330883 CEP162Q5TB80 1403 aa29.4■■■□□ 2.3
KCNH2-202ENST00000330883 WRNQ14191 1432 aaPredicted RBP eCLIP29.38■■■□□ 2.294e-6■■■□□ 17.8
KCNH2-202ENST00000330883 NEUROD1Q13562 356 aa29.3■■■□□ 2.28
KCNH2-202ENST00000330883 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
KCNH2-202ENST00000330883 ACIN1Q9UKV3 1341 aaKnown RBP29.28■■■□□ 2.28
KCNH2-202ENST00000330883 ATAD2BQ9ULI0 1458 aa29.27■■■□□ 2.28
KCNH2-202ENST00000330883 TNIKQ9UKE5 1360 aa29.26■■■□□ 2.28
KCNH2-202ENST00000330883 EEA1Q15075 1411 aa29.18■■■□□ 2.26
KCNH2-202ENST00000330883 APLP2Q06481 763 aa29.14■■■□□ 2.26
KCNH2-202ENST00000330883 GOLGA3Q08378 1498 aa29.12■■■□□ 2.25
KCNH2-202ENST00000330883 HNRNPUL2Q1KMD3 747 aaKnown RBP29.11■■■□□ 2.25
KCNH2-202ENST00000330883 DIEXFQ68CQ4 756 aaKnown RBP29.08■■■□□ 2.25
KCNH2-202ENST00000330883 GTF3C3Q9Y5Q9 886 aa29.08■■■□□ 2.25
KCNH2-202ENST00000330883 SYNJ1O43426 1573 aa29.01■■■□□ 2.24
KCNH2-202ENST00000330883 PEG3Q9GZU2 1588 aa28.99■■■□□ 2.23
KCNH2-202ENST00000330883 CLIP1P30622 1438 aa28.95■■■□□ 2.22
KCNH2-202ENST00000330883 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
KCNH2-202ENST00000330883 CENPBP07199 599 aaPredicted RBP28.93■■■□□ 2.22
KCNH2-202ENST00000330883 RAPGEF2Q9Y4G8 1499 aa28.85■■■□□ 2.21
KCNH2-202ENST00000330883 YTHDC1Q96MU7 727 aaKnown RBP28.69■■■□□ 2.18
KCNH2-202ENST00000330883 VPS8Q8N3P4 1428 aa28.65■■■□□ 2.18
KCNH2-202ENST00000330883 NCAPD3P42695 1498 aa28.62■■■□□ 2.17
KCNH2-202ENST00000330883 ZNF316A6NFI3 1004 aaPredicted RBP28.61■■■□□ 2.17
KCNH2-202ENST00000330883 KIF21BO75037 1637 aa28.6■■■□□ 2.17
KCNH2-202ENST00000330883 ITGAEP38570 1179 aa28.56■■■□□ 2.16
KCNH2-202ENST00000330883 TOP2BQ02880 1626 aa28.55■■■□□ 2.16
KCNH2-202ENST00000330883 KIF27Q86VH2 1401 aa28.5■■■□□ 2.15
KCNH2-202ENST00000330883 KANK4Q5T7N3 995 aaPredicted RBP28.49■■■□□ 2.15
KCNH2-202ENST00000330883 ATP1B4Q9UN42 357 aaPredicted RBP28.49■■■□□ 2.15
KCNH2-202ENST00000330883 CUX1P39880 1505 aa28.45■■■□□ 2.15
KCNH2-202ENST00000330883 MIER1Q8N108 512 aa28.43■■■□□ 2.14
KCNH2-202ENST00000330883 HMGXB3Q12766 1538 aa28.42■■■□□ 2.14
KCNH2-202ENST00000330883 CFTRP13569 1480 aa28.39■■■□□ 2.14
KCNH2-202ENST00000330883 P3H3Q8IVL6 736 aa28.39■■■□□ 2.14
KCNH2-202ENST00000330883 MYT1Q01538 1121 aa28.38■■■□□ 2.13
KCNH2-202ENST00000330883 PRXQ9BXM0 1461 aa28.37■■■□□ 2.13
KCNH2-202ENST00000330883 CUX2O14529 1486 aa28.33■■■□□ 2.13
KCNH2-202ENST00000330883 CADPSQ9ULU8 1353 aa28.3■■■□□ 2.12
KCNH2-202ENST00000330883 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
KCNH2-202ENST00000330883 ARAP1Q96P48 1450 aa28.26■■■□□ 2.11
KCNH2-202ENST00000330883 ERICH3Q5RHP9 1530 aa28.2■■■□□ 2.1
KCNH2-202ENST00000330883 IGF1RP08069 1367 aa28.2■■■□□ 2.1
KCNH2-202ENST00000330883 CARMIL1Q5VZK9 1371 aa28.18■■■□□ 2.1
KCNH2-202ENST00000330883 FAM50AQ14320 339 aaKnown RBP28.11■■■□□ 2.09
KCNH2-202ENST00000330883 FGD5Q6ZNL6 1462 aa28.09■■■□□ 2.09
KCNH2-202ENST00000330883 ARHGAP35Q9NRY4 1499 aa28.08■■■□□ 2.09
KCNH2-202ENST00000330883 CC2D2AQ9P2K1 1620 aa28.02■■■□□ 2.08
KCNH2-202ENST00000330883 CCNB3Q8WWL7 1395 aa28.01■■■□□ 2.07
KCNH2-202ENST00000330883 FANCD2Q9BXW9 1451 aa28.01■■■□□ 2.07
KCNH2-202ENST00000330883 DHX57Q6P158 1386 aaKnown RBP27.98■■■□□ 2.07
KCNH2-202ENST00000330883 RAD54L2Q9Y4B4 1467 aa27.97■■■□□ 2.07
KCNH2-202ENST00000330883 NESP48681 1621 aa27.95■■■□□ 2.07
KCNH2-202ENST00000330883 DNAJC5BQ9UF47 199 aa27.9■■■□□ 2.06
KCNH2-202ENST00000330883 RRBP1Q9P2E9 1410 aaKnown RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms