RNA–Protein interactions for RNA: ENST00000424263.6

PRDM11-201, Transcript of PR/SET domain 11, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PRDM11, Length 1,858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-201ENST00000424263 NISCHQ9Y2I1 1504 aa47.5■■■■■ 5.19
PRDM11-201ENST00000424263 CCDC180Q9P1Z9 1646 aa42.06■■■■■ 4.32
PRDM11-201ENST00000424263 ABCC9O60706 1549 aa40.4■■■■■ 4.06
PRDM11-201ENST00000424263 ZCCHC6Q5VYS8 1495 aaKnown RBP39.74■■■■□ 3.95
PRDM11-201ENST00000424263 DCAF1Q9Y4B6 1507 aa39.36■■■■□ 3.89
PRDM11-201ENST00000424263 NACADO15069 1562 aa39.3■■■■□ 3.88
PRDM11-201ENST00000424263 MYO15BQ96JP2 1530 aa39.29■■■■□ 3.88
PRDM11-201ENST00000424263 DCAF8L2P0C7V8 631 aa39.22■■■■□ 3.87
PRDM11-201ENST00000424263 RB1CC1Q8TDY2 1594 aa39.19■■■■□ 3.86
PRDM11-201ENST00000424263 UNC13AQ9UPW8 1703 aa38.49■■■■□ 3.75
PRDM11-201ENST00000424263 SCRIBQ14160 1630 aa38.37■■■■□ 3.73
PRDM11-201ENST00000424263 BICRAQ9NZM4 1560 aa38.04■■■■□ 3.68
PRDM11-201ENST00000424263 SHROOM4Q9ULL8 1493 aa37.81■■■■□ 3.64
PRDM11-201ENST00000424263 PABPN1Q86U42 306 aaKnown RBP eCLIP37.77■■■■□ 3.64
PRDM11-201ENST00000424263 EIF4G1Q04637 1599 aaKnown RBP36.95■■■■□ 3.51
PRDM11-201ENST00000424263 CECR2Q9BXF3 1484 aa36.91■■■■□ 3.5
PRDM11-201ENST00000424263 BAZ1AQ9NRL2 1556 aaPredicted RBP36.78■■■■□ 3.48
PRDM11-201ENST00000424263 SMARCA4P51532 1647 aa36.78■■■■□ 3.48
PRDM11-201ENST00000424263 CC2D2AQ9P2K1 1620 aa36.65■■■■□ 3.46
PRDM11-201ENST00000424263 MROH2BQ7Z745 1585 aa36.63■■■■□ 3.45
PRDM11-201ENST00000424263 DNAJC5BQ9UF47 199 aa36.44■■■■□ 3.42
PRDM11-201ENST00000424263 PEG3Q9GZU2 1588 aa36.42■■■■□ 3.42
PRDM11-201ENST00000424263 RSF1Q96T23 1441 aaPredicted RBP36.4■■■■□ 3.42
PRDM11-201ENST00000424263 SMARCA2P51531 1590 aa36.36■■■■□ 3.41
PRDM11-201ENST00000424263 ATAD2BQ9ULI0 1458 aa36.34■■■■□ 3.41
PRDM11-201ENST00000424263 WIZO95785 1651 aa36.32■■■■□ 3.4
PRDM11-201ENST00000424263 NCAPD3P42695 1498 aa36.21■■■■□ 3.39
PRDM11-201ENST00000424263 HMGXB3Q12766 1538 aa36.17■■■■□ 3.38
PRDM11-201ENST00000424263 BAZ1BQ9UIG0 1483 aaKnown RBP36.08■■■■□ 3.37
PRDM11-201ENST00000424263 TOP2AP11388 1531 aaKnown RBP35.94■■■■□ 3.34
PRDM11-201ENST00000424263 SUPT5HO00267 1087 aaKnown RBP35.83■■■■□ 3.33
PRDM11-201ENST00000424263 CCDC88BA6NC98 1476 aa35.46■■■■□ 3.27
PRDM11-201ENST00000424263 LAMC3Q9Y6N6 1575 aa35.21■■■■□ 3.23
PRDM11-201ENST00000424263 NESP48681 1621 aa35.18■■■■□ 3.22
PRDM11-201ENST00000424263 CADPSQ9ULU8 1353 aa35.16■■■■□ 3.22
PRDM11-201ENST00000424263 CFTRP13569 1480 aa35.13■■■■□ 3.21
PRDM11-201ENST00000424263 PRDM2Q13029 1718 aa35.12■■■■□ 3.21
PRDM11-201ENST00000424263 KIF21AQ7Z4S6 1674 aa34.9■■■■□ 3.18
PRDM11-201ENST00000424263 PDS5BQ9NTI5 1447 aa34.86■■■■□ 3.17
PRDM11-201ENST00000424263 FANCD2Q9BXW9 1451 aa34.8■■■■□ 3.16
PRDM11-201ENST00000424263 ERCC6Q03468 1493 aa34.74■■■■□ 3.15
PRDM11-201ENST00000424263 CEP164Q9UPV0 1460 aa34.7■■■■□ 3.15
PRDM11-201ENST00000424263 THOC2Q8NI27 1593 aaKnown RBP34.6■■■■□ 3.13
PRDM11-201ENST00000424263 MRC2Q9UBG0 1479 aa34.52■■■■□ 3.12
PRDM11-201ENST00000424263 WDR62O43379 1518 aa34.44■■■■□ 3.1
PRDM11-201ENST00000424263 URB2Q14146 1524 aaKnown RBP34.44■■■■□ 3.1
PRDM11-201ENST00000424263 ABCC8Q09428 1581 aa34.41■■■■□ 3.1
PRDM11-201ENST00000424263 DNMBPQ6XZF7 1577 aa34.38■■■■□ 3.09
PRDM11-201ENST00000424263 TOPBP1Q92547 1522 aa34.34■■■■□ 3.09
PRDM11-201ENST00000424263 CUX1P39880 1505 aa34.33■■■■□ 3.09
PRDM11-201ENST00000424263 WRNQ14191 1432 aaPredicted RBP eCLIP34.29■■■■□ 3.08
PRDM11-201ENST00000424263 BIVM-ERCC5R4GMW8 1640 aa34.27■■■■□ 3.08
PRDM11-201ENST00000424263 SYNJ1O43426 1573 aa34.27■■■■□ 3.08
PRDM11-201ENST00000424263 TOP2BQ02880 1626 aa34.23■■■■□ 3.07
PRDM11-201ENST00000424263 CUX2O14529 1486 aa34.19■■■■□ 3.06
PRDM11-201ENST00000424263 POLA1P09884 1462 aaPredicted RBP34.09■■■■□ 3.05
PRDM11-201ENST00000424263 FGD5Q6ZNL6 1462 aa34.09■■■■□ 3.05
PRDM11-201ENST00000424263 TARBP1Q13395 1621 aaKnown RBP33.98■■■■□ 3.03
PRDM11-201ENST00000424263 IFT140Q96RY7 1462 aa33.93■■■■□ 3.02
PRDM11-201ENST00000424263 WDR97A6NE52 1622 aa33.92■■■■□ 3.02
PRDM11-201ENST00000424263 RAD54L2Q9Y4B4 1467 aa33.9■■■■□ 3.02
PRDM11-201ENST00000424263 SOGA1O94964 1423 aa33.88■■■■□ 3.01
PRDM11-201ENST00000424263 CHIC1Q5VXU3 224 aa33.84■■■■□ 3.01
PRDM11-201ENST00000424263 TRIM41Q8WV44 630 aa33.81■■■■□ 3
PRDM11-201ENST00000424263 ABCA10Q8WWZ4 1543 aa33.8■■■■□ 3
PRDM11-201ENST00000424263 ZNF608Q9ULD9 1512 aaPredicted RBP33.75■■■□□ 2.99
PRDM11-201ENST00000424263 EIF4G3O43432 1585 aaKnown RBP33.73■■■□□ 2.99
PRDM11-201ENST00000424263 ABCA5Q8WWZ7 1642 aa33.69■■■□□ 2.98
PRDM11-201ENST00000424263 TDRD9Q8NDG6 1382 aaKnown RBP33.61■■■□□ 2.97
PRDM11-201ENST00000424263 AQRO60306 1485 aaKnown RBP eCLIP33.59■■■□□ 2.97
PRDM11-201ENST00000424263 PBRM1Q86U86 1689 aa33.58■■■□□ 2.97
PRDM11-201ENST00000424263 GAPVD1Q14C86 1478 aa33.55■■■□□ 2.96
PRDM11-201ENST00000424263 KIF27Q86VH2 1401 aa33.51■■■□□ 2.95
PRDM11-201ENST00000424263 GRIN2BQ13224 1484 aa33.45■■■□□ 2.95
PRDM11-201ENST00000424263 RUSC2Q8N2Y8 1516 aa33.43■■■□□ 2.94
PRDM11-201ENST00000424263 ERICH3Q5RHP9 1530 aa33.42■■■□□ 2.94
PRDM11-201ENST00000424263 SNAPC4Q5SXM2 1469 aa33.35■■■□□ 2.93
PRDM11-201ENST00000424263 MAGI1Q96QZ7 1491 aaPredicted RBP33.33■■■□□ 2.93
PRDM11-201ENST00000424263 ADAMTS12P58397 1594 aa33.31■■■□□ 2.92
PRDM11-201ENST00000424263 EEA1Q15075 1411 aa33.3■■■□□ 2.92
PRDM11-201ENST00000424263 CUL7Q14999 1698 aa33.29■■■□□ 2.92
PRDM11-201ENST00000424263 IGF1RP08069 1367 aa33.27■■■□□ 2.92
PRDM11-201ENST00000424263 CHD1O14646 1710 aa33.22■■■□□ 2.91
PRDM11-201ENST00000424263 SYNJ2O15056 1496 aa33.18■■■□□ 2.9
PRDM11-201ENST00000424263 FHAD1B1AJZ9 1412 aa33.17■■■□□ 2.9
PRDM11-201ENST00000424263 FAM9AQ8IZU1 332 aaPredicted RBP33.09■■■□□ 2.89
PRDM11-201ENST00000424263 CARMIL1Q5VZK9 1371 aa33.08■■■□□ 2.89
PRDM11-201ENST00000424263 CSRNP3Q8WYN3 585 aa33.08■■■□□ 2.89
PRDM11-201ENST00000424263 PRXQ9BXM0 1461 aa33.07■■■□□ 2.88
PRDM11-201ENST00000424263 GRIN2AQ12879 1464 aa33.06■■■□□ 2.88
PRDM11-201ENST00000424263 KIF21BO75037 1637 aa33■■■□□ 2.87
PRDM11-201ENST00000424263 RAPGEF2Q9Y4G8 1499 aa33■■■□□ 2.87
PRDM11-201ENST00000424263 CHMP7Q8WUX9 453 aaPredicted RBP32.99■■■□□ 2.87
PRDM11-201ENST00000424263 FBLN2P98095 1184 aa32.96■■■□□ 2.87
PRDM11-201ENST00000424263 CEP170Q5SW79 1584 aa32.91■■■□□ 2.86
PRDM11-201ENST00000424263 NUP160Q12769 1436 aa32.88■■■□□ 2.85
PRDM11-201ENST00000424263 CTTNBP2Q8WZ74 1663 aa32.82■■■□□ 2.84
PRDM11-201ENST00000424263 CLASP1Q7Z460 1538 aa32.81■■■□□ 2.84
PRDM11-201ENST00000424263 GOLGA3Q08378 1498 aa32.78■■■□□ 2.84
PRDM11-201ENST00000424263 OSCARQ8IYS5 282 aa32.76■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms