RNA–Protein interactions for RNA: ENST00000311177.6

HOXB9-201, Transcript of homeobox B9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB9, Length 2,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB9-201ENST00000311177 NISCHQ9Y2I1 1504 aa41.5■■■■■ 4.23
HOXB9-201ENST00000311177 CCDC180Q9P1Z9 1646 aa35.61■■■■□ 3.29
HOXB9-201ENST00000311177 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
HOXB9-201ENST00000311177 SHROOM4Q9ULL8 1493 aa34.86■■■■□ 3.17
HOXB9-201ENST00000311177 DCAF8L2P0C7V8 631 aa34.58■■■■□ 3.13
HOXB9-201ENST00000311177 DCAF1Q9Y4B6 1507 aa34.06■■■■□ 3.04
HOXB9-201ENST00000311177 SUPT5HO00267 1087 aaKnown RBP33.86■■■■□ 3.01
HOXB9-201ENST00000311177 ABCC9O60706 1549 aa33.56■■■□□ 2.96
HOXB9-201ENST00000311177 MYO15BQ96JP2 1530 aa33.33■■■□□ 2.93
HOXB9-201ENST00000311177 SCRIBQ14160 1630 aa33.26■■■□□ 2.91
HOXB9-201ENST00000311177 NACADO15069 1562 aa33.08■■■□□ 2.89
HOXB9-201ENST00000311177 RB1CC1Q8TDY2 1594 aa32.69■■■□□ 2.82
HOXB9-201ENST00000311177 CHIC1Q5VXU3 224 aa32.59■■■□□ 2.81
HOXB9-201ENST00000311177 RSF1Q96T23 1441 aaPredicted RBP32.57■■■□□ 2.8
HOXB9-201ENST00000311177 CECR2Q9BXF3 1484 aa32.41■■■□□ 2.78
HOXB9-201ENST00000311177 MROH2BQ7Z745 1585 aa32.23■■■□□ 2.75
HOXB9-201ENST00000311177 UNC13AQ9UPW8 1703 aa32.17■■■□□ 2.74
HOXB9-201ENST00000311177 WIZO95785 1651 aa32.01■■■□□ 2.71
HOXB9-201ENST00000311177 PABPN1Q86U42 306 aaKnown RBP eCLIP31.95■■■□□ 2.7
HOXB9-201ENST00000311177 BAZ1AQ9NRL2 1556 aaPredicted RBP31.93■■■□□ 2.7
HOXB9-201ENST00000311177 BICRAQ9NZM4 1560 aa31.82■■■□□ 2.68
HOXB9-201ENST00000311177 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
HOXB9-201ENST00000311177 HRCP23327 699 aa31.72■■■□□ 2.67
HOXB9-201ENST00000311177 TRIM41Q8WV44 630 aa31.6■■■□□ 2.65
HOXB9-201ENST00000311177 LOC105371045A0A1W2PR82 267 aa31.59■■■□□ 2.65
HOXB9-201ENST00000311177 TOP2AP11388 1531 aaKnown RBP31.51■■■□□ 2.63
HOXB9-201ENST00000311177 CCDC88BA6NC98 1476 aa31.36■■■□□ 2.61
HOXB9-201ENST00000311177 SMARCA2P51531 1590 aa31.31■■■□□ 2.6
HOXB9-201ENST00000311177 FAM9AQ8IZU1 332 aaPredicted RBP31.31■■■□□ 2.6
HOXB9-201ENST00000311177 EIF4G1Q04637 1599 aaKnown RBP31.28■■■□□ 2.6
HOXB9-201ENST00000311177 PEG3Q9GZU2 1588 aa31.17■■■□□ 2.58
HOXB9-201ENST00000311177 PCGF6Q9BYE7 350 aa31.16■■■□□ 2.58
HOXB9-201ENST00000311177 PPARGC1BQ86YN6 1023 aaKnown RBP31.14■■■□□ 2.58
HOXB9-201ENST00000311177 ATAD2BQ9ULI0 1458 aa31.1■■■□□ 2.57
HOXB9-201ENST00000311177 EHMT2Q96KQ7 1210 aa31.06■■■□□ 2.56
HOXB9-201ENST00000311177 ABCC8Q09428 1581 aa31.05■■■□□ 2.56
HOXB9-201ENST00000311177 BAZ1BQ9UIG0 1483 aaKnown RBP30.98■■■□□ 2.55
HOXB9-201ENST00000311177 SOGA1O94964 1423 aa30.63■■■□□ 2.49
HOXB9-201ENST00000311177 WRNQ14191 1432 aaPredicted RBP eCLIP30.62■■■□□ 2.496e-6■■■■■ 38.3
HOXB9-201ENST00000311177 NCAPD3P42695 1498 aa30.62■■■□□ 2.49
HOXB9-201ENST00000311177 HMGXB3Q12766 1538 aa30.56■■■□□ 2.48
HOXB9-201ENST00000311177 RUSC2Q8N2Y8 1516 aa30.51■■■□□ 2.47
HOXB9-201ENST00000311177 SYNJ1O43426 1573 aa30.5■■■□□ 2.47
HOXB9-201ENST00000311177 PELP1Q8IZL8 1130 aaKnown RBP30.49■■■□□ 2.47
HOXB9-201ENST00000311177 TRIM26Q12899 539 aaPredicted RBP30.43■■■□□ 2.46
HOXB9-201ENST00000311177 CSRNP3Q8WYN3 585 aa30.38■■■□□ 2.45
HOXB9-201ENST00000311177 EEA1Q15075 1411 aa30.34■■■□□ 2.45
HOXB9-201ENST00000311177 CC2D2AQ9P2K1 1620 aa30.22■■■□□ 2.43
HOXB9-201ENST00000311177 UBTFP17480 764 aaKnown RBP30.2■■■□□ 2.42
HOXB9-201ENST00000311177 CFTRP13569 1480 aa30.18■■■□□ 2.42
HOXB9-201ENST00000311177 TOP2BQ02880 1626 aa30.17■■■□□ 2.42
HOXB9-201ENST00000311177 CEP162Q5TB80 1403 aa30.15■■■□□ 2.42
HOXB9-201ENST00000311177 TNIKQ9UKE5 1360 aa30.15■■■□□ 2.42
HOXB9-201ENST00000311177 GOLGA3Q08378 1498 aa30.11■■■□□ 2.41
HOXB9-201ENST00000311177 BIVM-ERCC5R4GMW8 1640 aa30.08■■■□□ 2.41
HOXB9-201ENST00000311177 CUX1P39880 1505 aa30.05■■■□□ 2.4
HOXB9-201ENST00000311177 SCAF1Q9H7N4 1312 aaKnown RBP30.02■■■□□ 2.4
HOXB9-201ENST00000311177 CEP164Q9UPV0 1460 aa30.02■■■□□ 2.4
HOXB9-201ENST00000311177 CADPSQ9ULU8 1353 aa29.98■■■□□ 2.39
HOXB9-201ENST00000311177 KIF21BO75037 1637 aa29.96■■■□□ 2.39
HOXB9-201ENST00000311177 RAPGEF2Q9Y4G8 1499 aa29.91■■■□□ 2.38
HOXB9-201ENST00000311177 PRDM2Q13029 1718 aa29.88■■■□□ 2.37
HOXB9-201ENST00000311177 TTBK1Q5TCY1 1321 aaPredicted RBP29.87■■■□□ 2.37
HOXB9-201ENST00000311177 ZEB1P37275 1124 aaPredicted RBP29.81■■■□□ 2.36
HOXB9-201ENST00000311177 RANGAP1P46060 587 aaPredicted RBP29.79■■■□□ 2.36
HOXB9-201ENST00000311177 CLIP1P30622 1438 aa29.74■■■□□ 2.35
HOXB9-201ENST00000311177 KIF27Q86VH2 1401 aa29.74■■■□□ 2.35
HOXB9-201ENST00000311177 NESP48681 1621 aa29.7■■■□□ 2.35
HOXB9-201ENST00000311177 PRXQ9BXM0 1461 aa29.7■■■□□ 2.34
HOXB9-201ENST00000311177 FANCD2Q9BXW9 1451 aa29.69■■■□□ 2.34
HOXB9-201ENST00000311177 DNAJC5BQ9UF47 199 aa29.66■■■□□ 2.34
HOXB9-201ENST00000311177 FGD5Q6ZNL6 1462 aa29.62■■■□□ 2.33
HOXB9-201ENST00000311177 ERICH3Q5RHP9 1530 aa29.61■■■□□ 2.33
HOXB9-201ENST00000311177 CUX2O14529 1486 aa29.6■■■□□ 2.33
HOXB9-201ENST00000311177 VPS8Q8N3P4 1428 aa29.52■■■□□ 2.32
HOXB9-201ENST00000311177 IGF1RP08069 1367 aa29.48■■■□□ 2.31
HOXB9-201ENST00000311177 DNMBPQ6XZF7 1577 aa29.43■■■□□ 2.3
HOXB9-201ENST00000311177 TOPBP1Q92547 1522 aa29.42■■■□□ 2.3
HOXB9-201ENST00000311177 LAMC3Q9Y6N6 1575 aa29.42■■■□□ 2.3
HOXB9-201ENST00000311177 RAD54L2Q9Y4B4 1467 aa29.41■■■□□ 2.3
HOXB9-201ENST00000311177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.39■■■□□ 2.29
HOXB9-201ENST00000311177 POLA1P09884 1462 aaPredicted RBP29.37■■■□□ 2.29
HOXB9-201ENST00000311177 APLP2Q06481 763 aa29.35■■■□□ 2.29
HOXB9-201ENST00000311177 ARAP1Q96P48 1450 aa29.35■■■□□ 2.29
HOXB9-201ENST00000311177 CARMIL1Q5VZK9 1371 aa29.34■■■□□ 2.29
HOXB9-201ENST00000311177 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
HOXB9-201ENST00000311177 ACIN1Q9UKV3 1341 aaKnown RBP29.28■■■□□ 2.28
HOXB9-201ENST00000311177 MYT1Q01538 1121 aa29.26■■■□□ 2.27
HOXB9-201ENST00000311177 ABCA10Q8WWZ4 1543 aa29.26■■■□□ 2.27
HOXB9-201ENST00000311177 PDS5BQ9NTI5 1447 aa29.25■■■□□ 2.27
HOXB9-201ENST00000311177 CCER1Q8TC90 406 aaPredicted RBP29.25■■■□□ 2.27
HOXB9-201ENST00000311177 NEUROD1Q13562 356 aa29.23■■■□□ 2.27
HOXB9-201ENST00000311177 ARHGAP35Q9NRY4 1499 aa29.22■■■□□ 2.27
HOXB9-201ENST00000311177 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
HOXB9-201ENST00000311177 HNRNPUL2Q1KMD3 747 aaKnown RBP29.11■■■□□ 2.25
HOXB9-201ENST00000311177 KANK4Q5T7N3 995 aaPredicted RBP29.1■■■□□ 2.25
HOXB9-201ENST00000311177 TDRD9Q8NDG6 1382 aaKnown RBP29.1■■■□□ 2.25
HOXB9-201ENST00000311177 GTF3C3Q9Y5Q9 886 aa29.08■■■□□ 2.24
HOXB9-201ENST00000311177 WDR97A6NE52 1622 aa29.04■■■□□ 2.24
HOXB9-201ENST00000311177 P3H3Q8IVL6 736 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms