RNA–Protein interactions for RNA: ENST00000369769.3

KCNA3-201, Transcript of potassium voltage-gated channel subfamily A member 3, humanhuman

APPRIS P1 BASIC

Gene KCNA3, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3-201ENST00000369769 NISCHQ9Y2I1 1504 aa37.31■■■■□ 3.56
KCNA3-201ENST00000369769 SHROOM4Q9ULL8 1493 aa32.35■■■□□ 2.77
KCNA3-201ENST00000369769 HRCP23327 699 aa32.23■■■□□ 2.75
KCNA3-201ENST00000369769 CCDC180Q9P1Z9 1646 aa32.17■■■□□ 2.74
KCNA3-201ENST00000369769 SUPT5HO00267 1087 aaKnown RBP32.15■■■□□ 2.74
KCNA3-201ENST00000369769 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.67
KCNA3-201ENST00000369769 PCGF6Q9BYE7 350 aa31.73■■■□□ 2.67
KCNA3-201ENST00000369769 PPARGC1BQ86YN6 1023 aaKnown RBP31.69■■■□□ 2.66
KCNA3-201ENST00000369769 CHIC1Q5VXU3 224 aa31.54■■■□□ 2.64
KCNA3-201ENST00000369769 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
KCNA3-201ENST00000369769 ZCCHC6Q5VYS8 1495 aaKnown RBP31.3■■■□□ 2.6
KCNA3-201ENST00000369769 DCAF1Q9Y4B6 1507 aa30.93■■■□□ 2.54
KCNA3-201ENST00000369769 ABCC9O60706 1549 aa30.88■■■□□ 2.53
KCNA3-201ENST00000369769 LOC105371045A0A1W2PR82 267 aa30.86■■■□□ 2.53
KCNA3-201ENST00000369769 PELP1Q8IZL8 1130 aaKnown RBP30.7■■■□□ 2.51
KCNA3-201ENST00000369769 TRIM26Q12899 539 aaPredicted RBP30.67■■■□□ 2.5
KCNA3-201ENST00000369769 SCAF1Q9H7N4 1312 aaKnown RBP30.46■■■□□ 2.47
KCNA3-201ENST00000369769 ZEB1P37275 1124 aaPredicted RBP30.3■■■□□ 2.44
KCNA3-201ENST00000369769 NACADO15069 1562 aa30.09■■■□□ 2.41
KCNA3-201ENST00000369769 SCRIBQ14160 1630 aa30.03■■■□□ 2.4
KCNA3-201ENST00000369769 RB1CC1Q8TDY2 1594 aa29.86■■■□□ 2.37
KCNA3-201ENST00000369769 FAM9AQ8IZU1 332 aaPredicted RBP29.75■■■□□ 2.35
KCNA3-201ENST00000369769 ACIN1Q9UKV3 1341 aaKnown RBP29.72■■■□□ 2.35
KCNA3-201ENST00000369769 TRIM41Q8WV44 630 aa29.69■■■□□ 2.34
KCNA3-201ENST00000369769 NEUROD1Q13562 356 aa29.69■■■□□ 2.34
KCNA3-201ENST00000369769 EHMT2Q96KQ7 1210 aa29.68■■■□□ 2.34
KCNA3-201ENST00000369769 GTF3C3Q9Y5Q9 886 aa29.5■■■□□ 2.31
KCNA3-201ENST00000369769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.48■■■□□ 2.31
KCNA3-201ENST00000369769 MYT1Q01538 1121 aa29.4■■■□□ 2.3
KCNA3-201ENST00000369769 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
KCNA3-201ENST00000369769 PABPN1Q86U42 306 aaKnown RBP eCLIP29.37■■■□□ 2.29
KCNA3-201ENST00000369769 CCER1Q8TC90 406 aaPredicted RBP29.37■■■□□ 2.29
KCNA3-201ENST00000369769 DIEXFQ68CQ4 756 aaKnown RBP29.32■■■□□ 2.28
KCNA3-201ENST00000369769 CENPBP07199 599 aaPredicted RBP29.31■■■□□ 2.28
KCNA3-201ENST00000369769 UNC13AQ9UPW8 1703 aa29.19■■■□□ 2.26
KCNA3-201ENST00000369769 CECR2Q9BXF3 1484 aa29.18■■■□□ 2.26
KCNA3-201ENST00000369769 BICRAQ9NZM4 1560 aa28.97■■■□□ 2.23
KCNA3-201ENST00000369769 TTBK1Q5TCY1 1321 aaPredicted RBP28.95■■■□□ 2.22
KCNA3-201ENST00000369769 MROH2BQ7Z745 1585 aa28.94■■■□□ 2.22
KCNA3-201ENST00000369769 YTHDC1Q96MU7 727 aaKnown RBP28.89■■■□□ 2.22
KCNA3-201ENST00000369769 ZNF316A6NFI3 1004 aaPredicted RBP28.77■■■□□ 2.2
KCNA3-201ENST00000369769 BAZ1AQ9NRL2 1556 aaPredicted RBP28.76■■■□□ 2.19
KCNA3-201ENST00000369769 WIZO95785 1651 aa28.7■■■□□ 2.19
KCNA3-201ENST00000369769 MIER1Q8N108 512 aa28.61■■■□□ 2.17
KCNA3-201ENST00000369769 SMARCA4P51532 1647 aa28.61■■■□□ 2.17
KCNA3-201ENST00000369769 WRNQ14191 1432 aaPredicted RBP eCLIP28.55■■■□□ 2.16
KCNA3-201ENST00000369769 CEP162Q5TB80 1403 aa28.48■■■□□ 2.15
KCNA3-201ENST00000369769 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
KCNA3-201ENST00000369769 CCDC88BA6NC98 1476 aa28.32■■■□□ 2.12
KCNA3-201ENST00000369769 ABCC8Q09428 1581 aa28.31■■■□□ 2.12
KCNA3-201ENST00000369769 HNRNPUL2Q1KMD3 747 aaKnown RBP28.26■■■□□ 2.11
KCNA3-201ENST00000369769 TOP2AP11388 1531 aaKnown RBP28.26■■■□□ 2.11
KCNA3-201ENST00000369769 TNIKQ9UKE5 1360 aa28.26■■■□□ 2.11
KCNA3-201ENST00000369769 SOGA1O94964 1423 aa28.23■■■□□ 2.11
KCNA3-201ENST00000369769 UBTFP17480 764 aaKnown RBP28.21■■■□□ 2.11
KCNA3-201ENST00000369769 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
KCNA3-201ENST00000369769 SUPT16HQ9Y5B9 1047 aaKnown RBP28.1■■■□□ 2.09
KCNA3-201ENST00000369769 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
KCNA3-201ENST00000369769 RUSC2Q8N2Y8 1516 aa28.09■■■□□ 2.09
KCNA3-201ENST00000369769 PEG3Q9GZU2 1588 aa28.09■■■□□ 2.09
KCNA3-201ENST00000369769 CSRNP3Q8WYN3 585 aa28.08■■■□□ 2.09
KCNA3-201ENST00000369769 SMARCA2P51531 1590 aa28.07■■■□□ 2.08
KCNA3-201ENST00000369769 TSHZ2Q9NRE2 1034 aa27.94■■■□□ 2.06
KCNA3-201ENST00000369769 GOLGA3Q08378 1498 aa27.93■■■□□ 2.06
KCNA3-201ENST00000369769 EEA1Q15075 1411 aa27.91■■■□□ 2.06
KCNA3-201ENST00000369769 CLSPNQ9HAW4 1339 aa27.9■■■□□ 2.06
KCNA3-201ENST00000369769 ANP32EQ9BTT0 268 aa27.89■■■□□ 2.05
KCNA3-201ENST00000369769 NCAPD3P42695 1498 aa27.86■■■□□ 2.05
KCNA3-201ENST00000369769 CC2D2AQ9P2K1 1620 aa27.73■■■□□ 2.03
KCNA3-201ENST00000369769 BCL11AQ9H165 835 aa27.73■■■□□ 2.03
KCNA3-201ENST00000369769 CLIP1P30622 1438 aa27.72■■■□□ 2.03
KCNA3-201ENST00000369769 HMGXB3Q12766 1538 aa27.71■■■□□ 2.03
KCNA3-201ENST00000369769 APLP2Q06481 763 aa27.7■■■□□ 2.03
KCNA3-201ENST00000369769 VPS8Q8N3P4 1428 aa27.68■■■□□ 2.02
KCNA3-201ENST00000369769 RANGAP1P46060 587 aaPredicted RBP27.66■■■□□ 2.02
KCNA3-201ENST00000369769 DHX57Q6P158 1386 aaKnown RBP27.64■■■□□ 2.02
KCNA3-201ENST00000369769 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.01
KCNA3-201ENST00000369769 BCANQ96GW7 911 aa27.6■■■□□ 2.01
KCNA3-201ENST00000369769 KCNH8Q96L42 1107 aa27.58■■■□□ 2.01
KCNA3-201ENST00000369769 KIF21BO75037 1637 aa27.54■■■□□ 2
KCNA3-201ENST00000369769 RAPGEF2Q9Y4G8 1499 aa27.45■■□□□ 1.98
KCNA3-201ENST00000369769 FKBP8Q14318 412 aa27.42■■□□□ 1.98
KCNA3-201ENST00000369769 SYNJ1O43426 1573 aa27.42■■□□□ 1.98
KCNA3-201ENST00000369769 DNAJC5BQ9UF47 199 aa27.42■■□□□ 1.98
KCNA3-201ENST00000369769 KANK4Q5T7N3 995 aaPredicted RBP27.32■■□□□ 1.96
KCNA3-201ENST00000369769 CFTRP13569 1480 aa27.31■■□□□ 1.96
KCNA3-201ENST00000369769 RBM19Q9Y4C8 960 aaKnown RBP27.3■■□□□ 1.96
KCNA3-201ENST00000369769 CADPSQ9ULU8 1353 aa27.29■■□□□ 1.96
KCNA3-201ENST00000369769 ITGAEP38570 1179 aa27.2■■□□□ 1.94
KCNA3-201ENST00000369769 DDX10Q13206 875 aaKnown RBP27.18■■□□□ 1.94
KCNA3-201ENST00000369769 ARAP1Q96P48 1450 aa27.15■■□□□ 1.94
KCNA3-201ENST00000369769 RRBP1Q9P2E9 1410 aaKnown RBP27.14■■□□□ 1.94
KCNA3-201ENST00000369769 NEFLP07196 543 aa27.13■■□□□ 1.93
KCNA3-201ENST00000369769 NESP48681 1621 aa27.13■■□□□ 1.93
KCNA3-201ENST00000369769 TRIM52Q96A61 297 aa27.08■■□□□ 1.93
KCNA3-201ENST00000369769 CUX2O14529 1486 aa27.08■■□□□ 1.93
KCNA3-201ENST00000369769 MSH5O43196 834 aa27.07■■□□□ 1.92
KCNA3-201ENST00000369769 CCNB3Q8WWL7 1395 aa27.05■■□□□ 1.92
KCNA3-201ENST00000369769 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
KCNA3-201ENST00000369769 MAPKBP1O60336 1514 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms