RNA–Protein interactions for RNA: ENST00000621198.4

SYN2-206, Transcript of synapsin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYN2, Length 2,674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-206ENST00000621198 NISCHQ9Y2I1 1504 aa38.97■■■■□ 3.83
SYN2-206ENST00000621198 SHROOM4Q9ULL8 1493 aa33.64■■■□□ 2.98
SYN2-206ENST00000621198 SUPT5HO00267 1087 aaKnown RBP33.03■■■□□ 2.88
SYN2-206ENST00000621198 ZCCHC6Q5VYS8 1495 aaKnown RBP32.96■■■□□ 2.87
SYN2-206ENST00000621198 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.87
SYN2-206ENST00000621198 DCAF8L2P0C7V8 631 aa32.65■■■□□ 2.82
SYN2-206ENST00000621198 CHIC1Q5VXU3 224 aa32.02■■■□□ 2.72
SYN2-206ENST00000621198 MYO15BQ96JP2 1530 aa31.97■■■□□ 2.71
SYN2-206ENST00000621198 DCAF1Q9Y4B6 1507 aa31.82■■■□□ 2.68
SYN2-206ENST00000621198 PCGF6Q9BYE7 350 aa31.28■■■□□ 2.6
SYN2-206ENST00000621198 HRCP23327 699 aa31.23■■■□□ 2.59
SYN2-206ENST00000621198 LOC105371045A0A1W2PR82 267 aa31.21■■■□□ 2.59
SYN2-206ENST00000621198 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
SYN2-206ENST00000621198 ABCC9O60706 1549 aa31.14■■■□□ 2.58
SYN2-206ENST00000621198 RSF1Q96T23 1441 aaPredicted RBP30.94■■■□□ 2.54
SYN2-206ENST00000621198 PPARGC1BQ86YN6 1023 aaKnown RBP30.75■■■□□ 2.51
SYN2-206ENST00000621198 RB1CC1Q8TDY2 1594 aa30.68■■■□□ 2.5
SYN2-206ENST00000621198 TRIM41Q8WV44 630 aa30.66■■■□□ 2.5
SYN2-206ENST00000621198 FAM9AQ8IZU1 332 aaPredicted RBP30.57■■■□□ 2.48
SYN2-206ENST00000621198 TRIM26Q12899 539 aaPredicted RBP30.51■■■□□ 2.48
SYN2-206ENST00000621198 CECR2Q9BXF3 1484 aa30.51■■■□□ 2.47
SYN2-206ENST00000621198 NACADO15069 1562 aa30.49■■■□□ 2.47
SYN2-206ENST00000621198 EHMT2Q96KQ7 1210 aa30.45■■■□□ 2.46
SYN2-206ENST00000621198 MROH2BQ7Z745 1585 aa30.38■■■□□ 2.45
SYN2-206ENST00000621198 WIZO95785 1651 aa30.24■■■□□ 2.43
SYN2-206ENST00000621198 BAZ1AQ9NRL2 1556 aaPredicted RBP29.95■■■□□ 2.39
SYN2-206ENST00000621198 ZEB1P37275 1124 aaPredicted RBP29.82■■■□□ 2.36
SYN2-206ENST00000621198 EIF4G1Q04637 1599 aaKnown RBP29.75■■■□□ 2.35
SYN2-206ENST00000621198 TOP2AP11388 1531 aaKnown RBP29.67■■■□□ 2.34
SYN2-206ENST00000621198 ABCC8Q09428 1581 aa29.67■■■□□ 2.34
SYN2-206ENST00000621198 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
SYN2-206ENST00000621198 CCDC88BA6NC98 1476 aa29.63■■■□□ 2.33
SYN2-206ENST00000621198 UNC13AQ9UPW8 1703 aa29.6■■■□□ 2.33
SYN2-206ENST00000621198 SMARCA2P51531 1590 aa29.54■■■□□ 2.32
SYN2-206ENST00000621198 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.31
SYN2-206ENST00000621198 TTBK1Q5TCY1 1321 aaPredicted RBP29.47■■■□□ 2.31
SYN2-206ENST00000621198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.42■■■□□ 2.3
SYN2-206ENST00000621198 SOGA1O94964 1423 aa29.41■■■□□ 2.3
SYN2-206ENST00000621198 CCER1Q8TC90 406 aaPredicted RBP29.32■■■□□ 2.28
SYN2-206ENST00000621198 CEP162Q5TB80 1403 aa29.29■■■□□ 2.28
SYN2-206ENST00000621198 RUSC2Q8N2Y8 1516 aa29.27■■■□□ 2.28
SYN2-206ENST00000621198 UBTFP17480 764 aaKnown RBP29.24■■■□□ 2.27
SYN2-206ENST00000621198 CSRNP3Q8WYN3 585 aa29.22■■■□□ 2.27
SYN2-206ENST00000621198 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
SYN2-206ENST00000621198 WRNQ14191 1432 aaPredicted RBP eCLIP29.16■■■□□ 2.26
SYN2-206ENST00000621198 TNIKQ9UKE5 1360 aa29.16■■■□□ 2.26
SYN2-206ENST00000621198 EEA1Q15075 1411 aa29.09■■■□□ 2.25
SYN2-206ENST00000621198 GOLGA3Q08378 1498 aa29■■■□□ 2.23
SYN2-206ENST00000621198 PEG3Q9GZU2 1588 aa28.97■■■□□ 2.23
SYN2-206ENST00000621198 SYNJ1O43426 1573 aa28.93■■■□□ 2.22
SYN2-206ENST00000621198 SCAF1Q9H7N4 1312 aaKnown RBP28.91■■■□□ 2.22
SYN2-206ENST00000621198 ATAD2BQ9ULI0 1458 aa28.89■■■□□ 2.22
SYN2-206ENST00000621198 BAZ1BQ9UIG0 1483 aaKnown RBP28.86■■■□□ 2.21
SYN2-206ENST00000621198 CEP164Q9UPV0 1460 aa28.8■■■□□ 2.2
SYN2-206ENST00000621198 RANGAP1P46060 587 aaPredicted RBP28.8■■■□□ 2.2
SYN2-206ENST00000621198 DIEXFQ68CQ4 756 aaKnown RBP28.76■■■□□ 2.19
SYN2-206ENST00000621198 CLIP1P30622 1438 aa28.73■■■□□ 2.19
SYN2-206ENST00000621198 KIF21BO75037 1637 aa28.71■■■□□ 2.19
SYN2-206ENST00000621198 HNRNPUL2Q1KMD3 747 aaKnown RBP28.71■■■□□ 2.19
SYN2-206ENST00000621198 RAPGEF2Q9Y4G8 1499 aa28.66■■■□□ 2.18
SYN2-206ENST00000621198 NEUROD1Q13562 356 aa28.57■■■□□ 2.16
SYN2-206ENST00000621198 APLP2Q06481 763 aa28.57■■■□□ 2.16
SYN2-206ENST00000621198 VPS8Q8N3P4 1428 aa28.56■■■□□ 2.16
SYN2-206ENST00000621198 ACIN1Q9UKV3 1341 aaKnown RBP28.56■■■□□ 2.16
SYN2-206ENST00000621198 TOP2BQ02880 1626 aa28.49■■■□□ 2.15
SYN2-206ENST00000621198 ZNF316A6NFI3 1004 aaPredicted RBP28.47■■■□□ 2.15
SYN2-206ENST00000621198 CENPBP07199 599 aaPredicted RBP28.37■■■□□ 2.13
SYN2-206ENST00000621198 BIVM-ERCC5R4GMW8 1640 aa28.35■■■□□ 2.13
SYN2-206ENST00000621198 GTF3C3Q9Y5Q9 886 aa28.3■■■□□ 2.12
SYN2-206ENST00000621198 PRXQ9BXM0 1461 aa28.26■■■□□ 2.11
SYN2-206ENST00000621198 CUX1P39880 1505 aa28.26■■■□□ 2.11
SYN2-206ENST00000621198 YTHDC1Q96MU7 727 aaKnown RBP28.25■■■□□ 2.11
SYN2-206ENST00000621198 NCAPD3P42695 1498 aa28.24■■■□□ 2.11
SYN2-206ENST00000621198 PELP1Q8IZL8 1130 aaKnown RBP28.22■■■□□ 2.11
SYN2-206ENST00000621198 ARAP1Q96P48 1450 aa28.22■■■□□ 2.11
SYN2-206ENST00000621198 ERICH3Q5RHP9 1530 aa28.22■■■□□ 2.11
SYN2-206ENST00000621198 HMGXB3Q12766 1538 aa28.21■■■□□ 2.11
SYN2-206ENST00000621198 KANK4Q5T7N3 995 aaPredicted RBP28.2■■■□□ 2.1
SYN2-206ENST00000621198 KIF27Q86VH2 1401 aa28.16■■■□□ 2.1
SYN2-206ENST00000621198 MIER1Q8N108 512 aa28.15■■■□□ 2.1
SYN2-206ENST00000621198 CFTRP13569 1480 aa28.09■■■□□ 2.09
SYN2-206ENST00000621198 DHX57Q6P158 1386 aaKnown RBP27.99■■■□□ 2.07
SYN2-206ENST00000621198 ITGAEP38570 1179 aa27.96■■■□□ 2.07
SYN2-206ENST00000621198 ARHGAP35Q9NRY4 1499 aa27.96■■■□□ 2.07
SYN2-206ENST00000621198 CUX2O14529 1486 aa27.92■■■□□ 2.06
SYN2-206ENST00000621198 RRBP1Q9P2E9 1410 aaKnown RBP27.88■■■□□ 2.05
SYN2-206ENST00000621198 CLSPNQ9HAW4 1339 aa27.85■■■□□ 2.05
SYN2-206ENST00000621198 IGF1RP08069 1367 aa27.85■■■□□ 2.05
SYN2-206ENST00000621198 CCNB3Q8WWL7 1395 aa27.84■■■□□ 2.05
SYN2-206ENST00000621198 CADPSQ9ULU8 1353 aa27.79■■■□□ 2.04
SYN2-206ENST00000621198 PRDM2Q13029 1718 aa27.77■■■□□ 2.04
SYN2-206ENST00000621198 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.03
SYN2-206ENST00000621198 CARMIL1Q5VZK9 1371 aa27.76■■■□□ 2.03
SYN2-206ENST00000621198 P3H3Q8IVL6 736 aa27.71■■■□□ 2.03
SYN2-206ENST00000621198 ATP1B4Q9UN42 357 aaPredicted RBP27.67■■■□□ 2.02
SYN2-206ENST00000621198 TIAM1Q13009 1591 aa27.64■■■□□ 2.02
SYN2-206ENST00000621198 RAB3GAP2Q9H2M9 1393 aa27.63■■■□□ 2.01
SYN2-206ENST00000621198 FAM50AQ14320 339 aaKnown RBP27.59■■■□□ 2.01
SYN2-206ENST00000621198 PHLDB1Q86UU1 1377 aa27.56■■■□□ 2
SYN2-206ENST00000621198 LRRC9Q6ZRR7 1453 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 645.2 ms