RNA–Protein interactions for RNA: ENST00000358215.8

GMPPA-203, Transcript of GDP-mannose pyrophosphorylase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GMPPA, Length 1,823 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPA-203ENST00000358215 NISCHQ9Y2I1 1504 aa44.15■■■■■ 4.66
GMPPA-203ENST00000358215 CCDC180Q9P1Z9 1646 aa38.78■■■■□ 3.8
GMPPA-203ENST00000358215 ABCC9O60706 1549 aa37.45■■■■□ 3.59
GMPPA-203ENST00000358215 ZCCHC6Q5VYS8 1495 aaKnown RBP36.93■■■■□ 3.5
GMPPA-203ENST00000358215 DCAF8L2P0C7V8 631 aa36.73■■■■□ 3.47
GMPPA-203ENST00000358215 DCAF1Q9Y4B6 1507 aa36.48■■■■□ 3.43
GMPPA-203ENST00000358215 NACADO15069 1562 aa36.33■■■■□ 3.41
GMPPA-203ENST00000358215 MYO15BQ96JP2 1530 aa36.33■■■■□ 3.41
GMPPA-203ENST00000358215 RB1CC1Q8TDY2 1594 aa36.19■■■■□ 3.38
GMPPA-203ENST00000358215 SCRIBQ14160 1630 aa35.61■■■■□ 3.29
GMPPA-203ENST00000358215 SHROOM4Q9ULL8 1493 aa35.5■■■■□ 3.27
GMPPA-203ENST00000358215 UNC13AQ9UPW8 1703 aa35.44■■■■□ 3.26
GMPPA-203ENST00000358215 PABPN1Q86U42 306 aaKnown RBP eCLIP35.21■■■■□ 3.231e-5■□□□□ 8.6
GMPPA-203ENST00000358215 BICRAQ9NZM4 1560 aa35.2■■■■□ 3.23
GMPPA-203ENST00000358215 CECR2Q9BXF3 1484 aa34.43■■■■□ 3.1
GMPPA-203ENST00000358215 EIF4G1Q04637 1599 aaKnown RBP34.17■■■■□ 3.06
GMPPA-203ENST00000358215 MROH2BQ7Z745 1585 aa34.11■■■■□ 3.05
GMPPA-203ENST00000358215 BAZ1AQ9NRL2 1556 aaPredicted RBP34.11■■■■□ 3.05
GMPPA-203ENST00000358215 SMARCA4P51532 1647 aa34.08■■■■□ 3.05
GMPPA-203ENST00000358215 RSF1Q96T23 1441 aaPredicted RBP33.99■■■■□ 3.03
GMPPA-203ENST00000358215 CC2D2AQ9P2K1 1620 aa33.85■■■■□ 3.01
GMPPA-203ENST00000358215 DNAJC5BQ9UF47 199 aa33.85■■■■□ 3.01
GMPPA-203ENST00000358215 SUPT5HO00267 1087 aaKnown RBP33.76■■■■□ 3
GMPPA-203ENST00000358215 WIZO95785 1651 aa33.76■■■□□ 2.99
GMPPA-203ENST00000358215 ATAD2BQ9ULI0 1458 aa33.75■■■□□ 2.99
GMPPA-203ENST00000358215 PEG3Q9GZU2 1588 aa33.71■■■□□ 2.99
GMPPA-203ENST00000358215 SMARCA2P51531 1590 aa33.65■■■□□ 2.98
GMPPA-203ENST00000358215 NCAPD3P42695 1498 aa33.59■■■□□ 2.97
GMPPA-203ENST00000358215 BAZ1BQ9UIG0 1483 aaKnown RBP33.47■■■□□ 2.95
GMPPA-203ENST00000358215 HMGXB3Q12766 1538 aa33.43■■■□□ 2.94
GMPPA-203ENST00000358215 TOP2AP11388 1531 aaKnown RBP33.36■■■□□ 2.93
GMPPA-203ENST00000358215 CCDC88BA6NC98 1476 aa33.06■■■□□ 2.88
GMPPA-203ENST00000358215 NESP48681 1621 aa32.67■■■□□ 2.82
GMPPA-203ENST00000358215 CADPSQ9ULU8 1353 aa32.67■■■□□ 2.82
GMPPA-203ENST00000358215 CFTRP13569 1480 aa32.63■■■□□ 2.81
GMPPA-203ENST00000358215 LAMC3Q9Y6N6 1575 aa32.51■■■□□ 2.8
GMPPA-203ENST00000358215 CHIC1Q5VXU3 224 aa32.4■■■□□ 2.78
GMPPA-203ENST00000358215 PDS5BQ9NTI5 1447 aa32.3■■■□□ 2.76
GMPPA-203ENST00000358215 FANCD2Q9BXW9 1451 aa32.29■■■□□ 2.76
GMPPA-203ENST00000358215 PRDM2Q13029 1718 aa32.29■■■□□ 2.76
GMPPA-203ENST00000358215 KIF21AQ7Z4S6 1674 aa32.19■■■□□ 2.74
GMPPA-203ENST00000358215 CEP164Q9UPV0 1460 aa32.14■■■□□ 2.74
GMPPA-203ENST00000358215 ERCC6Q03468 1493 aa32.13■■■□□ 2.73
GMPPA-203ENST00000358215 ABCC8Q09428 1581 aa32.11■■■□□ 2.73
GMPPA-203ENST00000358215 WRNQ14191 1432 aaPredicted RBP eCLIP31.97■■■□□ 2.71
GMPPA-203ENST00000358215 URB2Q14146 1524 aaKnown RBP31.96■■■□□ 2.71
GMPPA-203ENST00000358215 MRC2Q9UBG0 1479 aa31.94■■■□□ 2.7
GMPPA-203ENST00000358215 CUX1P39880 1505 aa31.93■■■□□ 2.7
GMPPA-203ENST00000358215 SYNJ1O43426 1573 aa31.89■■■□□ 2.7
GMPPA-203ENST00000358215 THOC2Q8NI27 1593 aaKnown RBP31.89■■■□□ 2.7
GMPPA-203ENST00000358215 TOPBP1Q92547 1522 aa31.86■■■□□ 2.69
GMPPA-203ENST00000358215 DNMBPQ6XZF7 1577 aa31.83■■■□□ 2.69
GMPPA-203ENST00000358215 WDR62O43379 1518 aa31.81■■■□□ 2.68
GMPPA-203ENST00000358215 TOP2BQ02880 1626 aa31.79■■■□□ 2.68
GMPPA-203ENST00000358215 TRIM41Q8WV44 630 aa31.77■■■□□ 2.68
GMPPA-203ENST00000358215 BIVM-ERCC5R4GMW8 1640 aa31.75■■■□□ 2.67
GMPPA-203ENST00000358215 FGD5Q6ZNL6 1462 aa31.69■■■□□ 2.66
GMPPA-203ENST00000358215 POLA1P09884 1462 aaPredicted RBP31.66■■■□□ 2.66
GMPPA-203ENST00000358215 CUX2O14529 1486 aa31.6■■■□□ 2.65
GMPPA-203ENST00000358215 RAD54L2Q9Y4B4 1467 aa31.58■■■□□ 2.65
GMPPA-203ENST00000358215 SOGA1O94964 1423 aa31.54■■■□□ 2.64
GMPPA-203ENST00000358215 TARBP1Q13395 1621 aaKnown RBP31.45■■■□□ 2.63
GMPPA-203ENST00000358215 IFT140Q96RY7 1462 aa31.42■■■□□ 2.62
GMPPA-203ENST00000358215 ABCA10Q8WWZ4 1543 aa31.38■■■□□ 2.61
GMPPA-203ENST00000358215 ZNF608Q9ULD9 1512 aaPredicted RBP31.35■■■□□ 2.61
GMPPA-203ENST00000358215 TDRD9Q8NDG6 1382 aaKnown RBP31.34■■■□□ 2.61
GMPPA-203ENST00000358215 RUSC2Q8N2Y8 1516 aa31.33■■■□□ 2.61
GMPPA-203ENST00000358215 WDR97A6NE52 1622 aa31.32■■■□□ 2.6
GMPPA-203ENST00000358215 AQRO60306 1485 aaKnown RBP eCLIP31.27■■■□□ 2.66e-7■■■■■ 42.5
GMPPA-203ENST00000358215 FAM9AQ8IZU1 332 aaPredicted RBP31.21■■■□□ 2.59
GMPPA-203ENST00000358215 KIF27Q86VH2 1401 aa31.21■■■□□ 2.59
GMPPA-203ENST00000358215 ABCA5Q8WWZ7 1642 aa31.18■■■□□ 2.58
GMPPA-203ENST00000358215 GAPVD1Q14C86 1478 aa31.17■■■□□ 2.58
GMPPA-203ENST00000358215 EIF4G3O43432 1585 aaKnown RBP31.16■■■□□ 2.58
GMPPA-203ENST00000358215 LOC105371045A0A1W2PR82 267 aa31.13■■■□□ 2.57
GMPPA-203ENST00000358215 IGF1RP08069 1367 aa31.09■■■□□ 2.57
GMPPA-203ENST00000358215 EEA1Q15075 1411 aa31.04■■■□□ 2.56
GMPPA-203ENST00000358215 CSRNP3Q8WYN3 585 aa31.03■■■□□ 2.56
GMPPA-203ENST00000358215 GRIN2BQ13224 1484 aa31.03■■■□□ 2.56
GMPPA-203ENST00000358215 PBRM1Q86U86 1689 aa30.99■■■□□ 2.55
GMPPA-203ENST00000358215 ERICH3Q5RHP9 1530 aa30.98■■■□□ 2.55
GMPPA-203ENST00000358215 SNAPC4Q5SXM2 1469 aa30.93■■■□□ 2.54
GMPPA-203ENST00000358215 CARMIL1Q5VZK9 1371 aa30.88■■■□□ 2.53
GMPPA-203ENST00000358215 PRXQ9BXM0 1461 aa30.85■■■□□ 2.53
GMPPA-203ENST00000358215 MAGI1Q96QZ7 1491 aaPredicted RBP30.84■■■□□ 2.53
GMPPA-203ENST00000358215 ADAMTS12P58397 1594 aa30.82■■■□□ 2.52
GMPPA-203ENST00000358215 EHMT2Q96KQ7 1210 aa30.82■■■□□ 2.52
GMPPA-203ENST00000358215 FHAD1B1AJZ9 1412 aa30.81■■■□□ 2.52
GMPPA-203ENST00000358215 CUL7Q14999 1698 aa30.8■■■□□ 2.52
GMPPA-203ENST00000358215 RAPGEF2Q9Y4G8 1499 aa30.75■■■□□ 2.51
GMPPA-203ENST00000358215 SYNJ2O15056 1496 aa30.74■■■□□ 2.51
GMPPA-203ENST00000358215 FBLN2P98095 1184 aa30.74■■■□□ 2.51
GMPPA-203ENST00000358215 CHMP7Q8WUX9 453 aaPredicted RBP30.72■■■□□ 2.51
GMPPA-203ENST00000358215 KIF21BO75037 1637 aa30.7■■■□□ 2.51
GMPPA-203ENST00000358215 GRIN2AQ12879 1464 aa30.66■■■□□ 2.5
GMPPA-203ENST00000358215 CHD1O14646 1710 aa30.61■■■□□ 2.49
GMPPA-203ENST00000358215 GOLGA3Q08378 1498 aa30.61■■■□□ 2.49
GMPPA-203ENST00000358215 UBTFP17480 764 aaKnown RBP30.54■■■□□ 2.48
GMPPA-203ENST00000358215 CEP170Q5SW79 1584 aa30.5■■■□□ 2.47
GMPPA-203ENST00000358215 NUP160Q12769 1436 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms