Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 TMEM161A-204ENST00000587096 1065 ntTSL 517.31■□□□□ 0.369e-7■■■■□ 19.7
CSTF2TQ9H0L4 TMEM161A-211ENST00000590216 789 ntTSL 516.59■□□□□ 0.259e-7■■■■□ 19.7
CSTF2TQ9H0L4 TMEM161A-209ENST00000587985 1754 ntTSL 516.18■□□□□ 0.189e-7■■■■□ 19.7
CSTF2TQ9H0L4 TMEM161A-207ENST00000587915 540 ntTSL 415.45■□□□□ 0.069e-7■■■■□ 19.7
CSTF2TQ9H0L4 TMEM161A-205ENST00000587406 1923 ntTSL 515.33■□□□□ 0.049e-7■■■■□ 19.7
CSTF2TQ9H0L4 TMEM161A-210ENST00000589448 1799 ntTSL 515.14■□□□□ 0.019e-7■■■■□ 19.7
CSTF2TQ9H0L4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.91□□□□□ -0.029e-7■■■■□ 19.7
CSTF2TQ9H0L4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.039e-7■■■■□ 19.7
CSTF2TQ9H0L4 TMEM161A-203ENST00000586357 482 ntTSL 413.87□□□□□ -0.199e-7■■■■□ 19.7
CSTF2TQ9H0L4 TMEM161A-215ENST00000592369 528 ntTSL 312.78□□□□□ -0.369e-7■■■■□ 19.7
CSTF2TQ9H0L4 TMEM161A-214ENST00000592147 347 ntTSL 511.36□□□□□ -0.599e-7■■■■□ 19.7
CSTF2TQ9H0L4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.1■□□□□ 0.811e-6■■■■□ 19.7
CSTF2TQ9H0L4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.84■□□□□ 0.131e-6■■■■□ 19.7
CSTF2TQ9H0L4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.27■□□□□ 0.041e-6■■■■□ 19.7
CSTF2TQ9H0L4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.011e-6■■■■□ 19.7
CSTF2TQ9H0L4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.31e-6■■■■□ 19.7
CSTF2TQ9H0L4 GPR78-206ENST00000513120 3720 ntTSL 211.09□□□□□ -0.631e-6■■■■□ 19.7
CSTF2TQ9H0L4 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.01□□□□□ -1.291e-7■■■■□ 19.7
CSTF2TQ9H0L4 SLC25A13-203ENST00000472162 568 ntTSL 415.45■□□□□ 0.063e-6■■■■□ 19.6
CSTF2TQ9H0L4 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.523e-6■■■■□ 19.6
CSTF2TQ9H0L4 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.053e-6■■■■□ 19.6
CSTF2TQ9H0L4 GRAMD4-204ENST00000431155 311 ntTSL 328.52■■■□□ 2.162e-6■■■■□ 19.6
CSTF2TQ9H0L4 KBTBD2-207ENST00000485611 537 ntTSL 412.2□□□□□ -0.461e-7■■■■□ 19.6
CSTF2TQ9H0L4 KBTBD2-204ENST00000452926 537 ntTSL 412.2□□□□□ -0.461e-7■■■■□ 19.6
CSTF2TQ9H0L4 KBTBD2-203ENST00000424468 593 ntTSL 47.46□□□□□ -1.221e-7■■■■□ 19.6
CSTF2TQ9H0L4 KBTBD2-205ENST00000453627 724 ntTSL 35.17□□□□□ -1.581e-7■■■■□ 19.6
CSTF2TQ9H0L4 UBALD1-205ENST00000590891 2641 ntBASIC15.78■□□□□ 0.127e-10■■■■□ 19.6
CSTF2TQ9H0L4 SLC19A1-210ENST00000486303 708 ntTSL 219.18■□□□□ 0.663e-7■■■■□ 19.6
CSTF2TQ9H0L4 PPP1R37-207ENST00000544897 527 ntTSL 23.43□□□□□ -1.869e-7■■■■□ 19.6
CSTF2TQ9H0L4 EHBP1-204ENST00000405482 1311 ntTSL 221.19■□□□□ 0.986e-9■■■■□ 19.6
CSTF2TQ9H0L4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.526e-9■■■■□ 19.6
CSTF2TQ9H0L4 EHBP1-211ENST00000449820 539 ntTSL 58.31□□□□□ -1.086e-9■■■■□ 19.6
CSTF2TQ9H0L4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.636e-9■■■■□ 19.6
CSTF2TQ9H0L4 KLF13-206ENST00000558921 440 ntTSL 324.83■■□□□ 1.577e-6■■■■□ 19.6
CSTF2TQ9H0L4 GNA11-202ENST00000586180 739 ntTSL 323.15■■□□□ 1.37e-6■■■■□ 19.6
CSTF2TQ9H0L4 TMEM250-203ENST00000448040 588 ntTSL 222.32■■□□□ 1.167e-6■■■■□ 19.6
CSTF2TQ9H0L4 ATP2C1-217ENST00000509662 559 ntTSL 422.27■■□□□ 1.167e-6■■■■□ 19.6
CSTF2TQ9H0L4 TMEM250-202ENST00000447934 648 ntTSL 321.65■■□□□ 1.067e-6■■■■□ 19.6
CSTF2TQ9H0L4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.947e-6■■■■□ 19.6
CSTF2TQ9H0L4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.897e-6■■■■□ 19.6
CSTF2TQ9H0L4 TMEM250-204ENST00000557985 1981 ntTSL 1 (best)19.39■□□□□ 0.697e-6■■■■□ 19.6
CSTF2TQ9H0L4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.657e-6■■■■□ 19.6
CSTF2TQ9H0L4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.647e-7■■■■□ 19.6
CSTF2TQ9H0L4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.98■□□□□ 0.637e-6■■■■□ 19.6
CSTF2TQ9H0L4 GNB1L-204ENST00000453108 702 ntTSL 318.91■□□□□ 0.627e-7■■■■□ 19.6
CSTF2TQ9H0L4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.517e-6■■■■□ 19.6
CSTF2TQ9H0L4 RTL10-204ENST00000416337 730 ntAPPRIS ALT2 TSL 217.94■□□□□ 0.466e-7■■■■□ 19.6
CSTF2TQ9H0L4 GNB1L-206ENST00000481086 854 ntTSL 317.94■□□□□ 0.466e-7■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-217ENST00000520254 579 ntTSL 417.85■□□□□ 0.456e-11■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-221ENST00000522361 367 ntTSL 417.77■□□□□ 0.446e-11■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-209ENST00000518879 820 ntTSL 517.55■□□□□ 0.46e-11■■■■□ 19.6
CSTF2TQ9H0L4 HDAC4-217ENST00000553145 552 ntTSL 417.55■□□□□ 0.47e-6■■■■□ 19.6
CSTF2TQ9H0L4 VEZF1-203ENST00000583932 825 ntTSL 517.51■□□□□ 0.397e-6■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-219ENST00000521223 587 ntTSL 417.5■□□□□ 0.396e-11■■■■□ 19.6
CSTF2TQ9H0L4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.395e-7■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-208ENST00000518344 554 ntTSL 317.49■□□□□ 0.396e-11■■■■□ 19.6
CSTF2TQ9H0L4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.387e-6■■■■□ 19.6
CSTF2TQ9H0L4 DPP9-209ENST00000597726 570 ntTSL 417.11■□□□□ 0.337e-6■■■■□ 19.6
CSTF2TQ9H0L4 GNA11-206ENST00000590534 2676 ntTSL 217.09■□□□□ 0.337e-6■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-205ENST00000518167 421 ntTSL 517.06■□□□□ 0.326e-11■■■■□ 19.6
CSTF2TQ9H0L4 GNB1L-205ENST00000460402 1197 ntTSL 317.03■□□□□ 0.327e-7■■■■□ 19.6
CSTF2TQ9H0L4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.85■□□□□ 0.297e-7■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.226e-11■■■■□ 19.6
CSTF2TQ9H0L4 DPP9-224ENST00000601764 1909 ntTSL 516.2■□□□□ 0.187e-6■■■■□ 19.6
CSTF2TQ9H0L4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.157e-6■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-216ENST00000520204 699 ntTSL 515.44■□□□□ 0.066e-11■■■■□ 19.6
CSTF2TQ9H0L4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.31■□□□□ 0.047e-6■■■■□ 19.6
CSTF2TQ9H0L4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.27■□□□□ 0.047e-6■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-210ENST00000519020 573 ntTSL 515.07■□□□□ 06e-11■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.016e-11■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-211ENST00000519070 561 ntTSL 314.91□□□□□ -0.026e-11■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.91□□□□□ -0.026e-11■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.036e-11■■■■□ 19.6
CSTF2TQ9H0L4 CLSTN3-216ENST00000545663 533 ntTSL 414.84□□□□□ -0.037e-6■■■■□ 19.6
CSTF2TQ9H0L4 CLSTN3-213ENST00000541953 570 ntTSL 514.66□□□□□ -0.067e-6■■■■□ 19.6
CSTF2TQ9H0L4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.067e-6■■■■□ 19.6
CSTF2TQ9H0L4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.17e-6■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.146e-11■■■■□ 19.6
CSTF2TQ9H0L4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.17□□□□□ -0.147e-6■■■■□ 19.6
CSTF2TQ9H0L4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.79□□□□□ -0.27e-6■■■■□ 19.6
CSTF2TQ9H0L4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.217e-6■■■■□ 19.6
CSTF2TQ9H0L4 SLC35E2B-202ENST00000481276 2199 ntTSL 213.69□□□□□ -0.227e-6■■■■□ 19.6
CSTF2TQ9H0L4 SSBP3-201ENST00000326956 2913 ntTSL 213.68□□□□□ -0.222e-7■■■■□ 19.6
CSTF2TQ9H0L4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.44□□□□□ -0.267e-6■■■■□ 19.6
CSTF2TQ9H0L4 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.277e-6■■■■□ 19.6
CSTF2TQ9H0L4 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.317e-7■■■■□ 19.6
CSTF2TQ9H0L4 C10orf67-203ENST00000376501 2288 ntTSL 512.83□□□□□ -0.357e-6■■■■□ 19.6
CSTF2TQ9H0L4 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.79□□□□□ -0.367e-6■■■■□ 19.6
CSTF2TQ9H0L4 CLSTN3-205ENST00000535452 533 ntTSL 412.66□□□□□ -0.387e-6■■■■□ 19.6
CSTF2TQ9H0L4 RTL10-205ENST00000484072 1385 ntTSL 212.65□□□□□ -0.386e-7■■■■□ 19.6
CSTF2TQ9H0L4 AZIN1-207ENST00000520402 660 ntTSL 412.57□□□□□ -0.45e-7■■■■□ 19.6
CSTF2TQ9H0L4 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.49□□□□□ -0.417e-6■■■■□ 19.6
CSTF2TQ9H0L4 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.426e-7■■■■□ 19.6
CSTF2TQ9H0L4 DPP9-215ENST00000599163 835 ntTSL 512.34□□□□□ -0.437e-6■■■■□ 19.6
CSTF2TQ9H0L4 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.25□□□□□ -0.457e-6■■■■□ 19.6
CSTF2TQ9H0L4 ZFYVE21-209ENST00000555501 4453 ntTSL 1 (best)12.25□□□□□ -0.457e-6■■■■□ 19.6
CSTF2TQ9H0L4 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.476e-7■■■■□ 19.6
CSTF2TQ9H0L4 HDAC4-207ENST00000461113 1019 ntTSL 1 (best)11.62□□□□□ -0.557e-6■■■■□ 19.6
CSTF2TQ9H0L4 ATP2C1-209ENST00000505072 556 ntTSL 411.58□□□□□ -0.567e-6■■■■□ 19.6
CSTF2TQ9H0L4 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.616e-11■■■■□ 19.6
Retrieved 100 of 19,151 protein–RNA pairs in 309.7 ms