RNA–Protein interactions for RNA: ENST00000519824.6

FAM49B-215, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-215ENST00000519824 NISCHQ9Y2I1 1504 aa24.08■■□□□ 1.45
FAM49B-215ENST00000519824 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
FAM49B-215ENST00000519824 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
FAM49B-215ENST00000519824 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
FAM49B-215ENST00000519824 EHMT2Q96KQ7 1210 aa21.24■□□□□ 0.99
FAM49B-215ENST00000519824 FAM9AQ8IZU1 332 aaPredicted RBP20.77■□□□□ 0.92
FAM49B-215ENST00000519824 PCGF6Q9BYE7 350 aa20.46■□□□□ 0.87
FAM49B-215ENST00000519824 LOC105371045A0A1W2PR82 267 aa20.43■□□□□ 0.86
FAM49B-215ENST00000519824 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
FAM49B-215ENST00000519824 TTBK1Q5TCY1 1321 aaPredicted RBP20.38■□□□□ 0.85
FAM49B-215ENST00000519824 ABCC9O60706 1549 aa20.32■□□□□ 0.84
FAM49B-215ENST00000519824 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
FAM49B-215ENST00000519824 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
FAM49B-215ENST00000519824 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
FAM49B-215ENST00000519824 RANGAP1P46060 587 aaPredicted RBP20.08■□□□□ 0.81
FAM49B-215ENST00000519824 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.79
FAM49B-215ENST00000519824 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
FAM49B-215ENST00000519824 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.75
FAM49B-215ENST00000519824 CCDC180Q9P1Z9 1646 aa19.7■□□□□ 0.74
FAM49B-215ENST00000519824 UBTFP17480 764 aaKnown RBP19.63■□□□□ 0.73
FAM49B-215ENST00000519824 HRCP23327 699 aa19.53■□□□□ 0.72
FAM49B-215ENST00000519824 TRIM26Q12899 539 aaPredicted RBP19.42■□□□□ 0.7
FAM49B-215ENST00000519824 CCER1Q8TC90 406 aaPredicted RBP19.36■□□□□ 0.69
FAM49B-215ENST00000519824 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
FAM49B-215ENST00000519824 CECR2Q9BXF3 1484 aa19.32■□□□□ 0.68
FAM49B-215ENST00000519824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.31■□□□□ 0.68
FAM49B-215ENST00000519824 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
FAM49B-215ENST00000519824 APLP2Q06481 763 aa19.28■□□□□ 0.68
FAM49B-215ENST00000519824 HNRNPUL2Q1KMD3 747 aaKnown RBP19.18■□□□□ 0.66
FAM49B-215ENST00000519824 ITGAEP38570 1179 aa19.12■□□□□ 0.65
FAM49B-215ENST00000519824 RB1CC1Q8TDY2 1594 aa19.01■□□□□ 0.63
FAM49B-215ENST00000519824 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
FAM49B-215ENST00000519824 YTHDC1Q96MU7 727 aaKnown RBP18.94■□□□□ 0.62
FAM49B-215ENST00000519824 DCAF1Q9Y4B6 1507 aa18.94■□□□□ 0.62
FAM49B-215ENST00000519824 CSRNP3Q8WYN3 585 aa18.9■□□□□ 0.62
FAM49B-215ENST00000519824 ZEB1P37275 1124 aaPredicted RBP18.85■□□□□ 0.61
FAM49B-215ENST00000519824 P3H3Q8IVL6 736 aa18.83■□□□□ 0.6
FAM49B-215ENST00000519824 NACADO15069 1562 aa18.8■□□□□ 0.6
FAM49B-215ENST00000519824 WIZO95785 1651 aa18.78■□□□□ 0.6
FAM49B-215ENST00000519824 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
FAM49B-215ENST00000519824 SOGA1O94964 1423 aa18.69■□□□□ 0.58
FAM49B-215ENST00000519824 ARID3CA6NKF2 412 aa18.68■□□□□ 0.58
FAM49B-215ENST00000519824 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
FAM49B-215ENST00000519824 FAM50AQ14320 339 aaKnown RBP18.53■□□□□ 0.56
FAM49B-215ENST00000519824 BAZ1AQ9NRL2 1556 aaPredicted RBP18.53■□□□□ 0.56
FAM49B-215ENST00000519824 DIEXFQ68CQ4 756 aaKnown RBP18.53■□□□□ 0.56
FAM49B-215ENST00000519824 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.56
FAM49B-215ENST00000519824 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
FAM49B-215ENST00000519824 CEP162Q5TB80 1403 aa18.47■□□□□ 0.55
FAM49B-215ENST00000519824 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
FAM49B-215ENST00000519824 NEUROD1Q13562 356 aa18.44■□□□□ 0.54
FAM49B-215ENST00000519824 BAZ1BQ9UIG0 1483 aaKnown RBP18.42■□□□□ 0.54
FAM49B-215ENST00000519824 FBLN2P98095 1184 aa18.36■□□□□ 0.53
FAM49B-215ENST00000519824 CENPBP07199 599 aaPredicted RBP18.33■□□□□ 0.52
FAM49B-215ENST00000519824 CLIP1P30622 1438 aa18.32■□□□□ 0.52
FAM49B-215ENST00000519824 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
FAM49B-215ENST00000519824 HIRIP3Q9BW71 556 aaPredicted RBP18.24■□□□□ 0.51
FAM49B-215ENST00000519824 TOP2AP11388 1531 aaKnown RBP18.21■□□□□ 0.5
FAM49B-215ENST00000519824 KANK4Q5T7N3 995 aaPredicted RBP18.2■□□□□ 0.5
FAM49B-215ENST00000519824 POLR3GLQ9BT43 218 aa18.2■□□□□ 0.5
FAM49B-215ENST00000519824 TNIKQ9UKE5 1360 aa18.2■□□□□ 0.5
FAM49B-215ENST00000519824 ZNF316A6NFI3 1004 aaPredicted RBP18.19■□□□□ 0.5
FAM49B-215ENST00000519824 GOLGA3Q08378 1498 aa18.18■□□□□ 0.5
FAM49B-215ENST00000519824 GTF3C3Q9Y5Q9 886 aa18.17■□□□□ 0.5
FAM49B-215ENST00000519824 ATAD2BQ9ULI0 1458 aa18.16■□□□□ 0.5
FAM49B-215ENST00000519824 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
FAM49B-215ENST00000519824 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
FAM49B-215ENST00000519824 TRIM52Q96A61 297 aa18.12■□□□□ 0.49
FAM49B-215ENST00000519824 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
FAM49B-215ENST00000519824 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.49
FAM49B-215ENST00000519824 MIER1Q8N108 512 aa18.07■□□□□ 0.48
FAM49B-215ENST00000519824 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
FAM49B-215ENST00000519824 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
FAM49B-215ENST00000519824 ZNF777Q9ULD5 760 aaPredicted RBP18.01■□□□□ 0.47
FAM49B-215ENST00000519824 ZNF326Q5BKZ1 582 aaKnown RBP18■□□□□ 0.47
FAM49B-215ENST00000519824 CUX2O14529 1486 aa17.99■□□□□ 0.47
FAM49B-215ENST00000519824 EEA1Q15075 1411 aa17.98■□□□□ 0.47
FAM49B-215ENST00000519824 BCANQ96GW7 911 aa17.98■□□□□ 0.47
FAM49B-215ENST00000519824 SIN3AQ96ST3 1273 aa17.97■□□□□ 0.47
FAM49B-215ENST00000519824 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
FAM49B-215ENST00000519824 KIF27Q86VH2 1401 aa17.96■□□□□ 0.47
FAM49B-215ENST00000519824 TDRD9Q8NDG6 1382 aaKnown RBP17.94■□□□□ 0.46
FAM49B-215ENST00000519824 DDX10Q13206 875 aaKnown RBP17.92■□□□□ 0.46
FAM49B-215ENST00000519824 RRP7BPQ9NSQ0 103 aa17.91■□□□□ 0.46
FAM49B-215ENST00000519824 BICRAQ9NZM4 1560 aa17.91■□□□□ 0.46
FAM49B-215ENST00000519824 MYT1LQ9UL68 1186 aa17.9■□□□□ 0.46
FAM49B-215ENST00000519824 SENP3-EIF4A1A0A087X0R7 540 aa17.88■□□□□ 0.45
FAM49B-215ENST00000519824 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
FAM49B-215ENST00000519824 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
FAM49B-215ENST00000519824 VPS8Q8N3P4 1428 aa17.84■□□□□ 0.45
FAM49B-215ENST00000519824 UNC13AQ9UPW8 1703 aa17.81■□□□□ 0.44
FAM49B-215ENST00000519824 MTUS2Q5JR59 1369 aa17.79■□□□□ 0.44
FAM49B-215ENST00000519824 CADPSQ9ULU8 1353 aa17.77■□□□□ 0.43
FAM49B-215ENST00000519824 NESP48681 1621 aa17.74■□□□□ 0.43
FAM49B-215ENST00000519824 RAD54L2Q9Y4B4 1467 aa17.74■□□□□ 0.43
FAM49B-215ENST00000519824 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
FAM49B-215ENST00000519824 FOXD1Q16676 465 aa17.73■□□□□ 0.43
FAM49B-215ENST00000519824 CHMP7Q8WUX9 453 aaPredicted RBP17.72■□□□□ 0.43
FAM49B-215ENST00000519824 FHOD3Q2V2M9 1422 aa17.72■□□□□ 0.43
FAM49B-215ENST00000519824 CCNB3Q8WWL7 1395 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms