RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 NISCHQ9Y2I1 1504 aa41.07■■■■■ 4.17
FAM49B-214ENST00000519540 CCDC180Q9P1Z9 1646 aa35.59■■■■□ 3.29
FAM49B-214ENST00000519540 ZCCHC6Q5VYS8 1495 aaKnown RBP34.55■■■■□ 3.12
FAM49B-214ENST00000519540 DCAF1Q9Y4B6 1507 aa33.92■■■■□ 3.02
FAM49B-214ENST00000519540 DCAF8L2P0C7V8 631 aa33.91■■■■□ 3.02
FAM49B-214ENST00000519540 SHROOM4Q9ULL8 1493 aa33.82■■■■□ 3
FAM49B-214ENST00000519540 ABCC9O60706 1549 aa33.46■■■□□ 2.95
FAM49B-214ENST00000519540 MYO15BQ96JP2 1530 aa33.38■■■□□ 2.93
FAM49B-214ENST00000519540 NACADO15069 1562 aa33.1■■■□□ 2.89
FAM49B-214ENST00000519540 SCRIBQ14160 1630 aa32.85■■■□□ 2.85
FAM49B-214ENST00000519540 RB1CC1Q8TDY2 1594 aa32.74■■■□□ 2.83
FAM49B-214ENST00000519540 SUPT5HO00267 1087 aaKnown RBP32.72■■■□□ 2.83
FAM49B-214ENST00000519540 UNC13AQ9UPW8 1703 aa32.13■■■□□ 2.73
FAM49B-214ENST00000519540 RSF1Q96T23 1441 aaPredicted RBP32.02■■■□□ 2.72
FAM49B-214ENST00000519540 CECR2Q9BXF3 1484 aa31.94■■■□□ 2.7
FAM49B-214ENST00000519540 BICRAQ9NZM4 1560 aa31.79■■■□□ 2.68
FAM49B-214ENST00000519540 MROH2BQ7Z745 1585 aa31.77■■■□□ 2.68
FAM49B-214ENST00000519540 PABPN1Q86U42 306 aaKnown RBP eCLIP31.67■■■□□ 2.66
FAM49B-214ENST00000519540 BAZ1AQ9NRL2 1556 aaPredicted RBP31.66■■■□□ 2.66
FAM49B-214ENST00000519540 WIZO95785 1651 aa31.54■■■□□ 2.64
FAM49B-214ENST00000519540 SMARCA4P51532 1647 aa31.49■■■□□ 2.63
FAM49B-214ENST00000519540 CHIC1Q5VXU3 224 aa31.49■■■□□ 2.63
FAM49B-214ENST00000519540 TOP2AP11388 1531 aaKnown RBP31.16■■■□□ 2.58
FAM49B-214ENST00000519540 PEG3Q9GZU2 1588 aa31.08■■■□□ 2.57
FAM49B-214ENST00000519540 ATAD2BQ9ULI0 1458 aa30.91■■■□□ 2.54
FAM49B-214ENST00000519540 SMARCA2P51531 1590 aa30.91■■■□□ 2.54
FAM49B-214ENST00000519540 CCDC88BA6NC98 1476 aa30.9■■■□□ 2.54
FAM49B-214ENST00000519540 EIF4G1Q04637 1599 aaKnown RBP30.79■■■□□ 2.52
FAM49B-214ENST00000519540 BAZ1BQ9UIG0 1483 aaKnown RBP30.74■■■□□ 2.51
FAM49B-214ENST00000519540 TRIM41Q8WV44 630 aa30.71■■■□□ 2.51
FAM49B-214ENST00000519540 NCAPD3P42695 1498 aa30.58■■■□□ 2.49
FAM49B-214ENST00000519540 HMGXB3Q12766 1538 aa30.53■■■□□ 2.48
FAM49B-214ENST00000519540 ABCC8Q09428 1581 aa30.37■■■□□ 2.45
FAM49B-214ENST00000519540 LOC105371045A0A1W2PR82 267 aa30.34■■■□□ 2.45
FAM49B-214ENST00000519540 CC2D2AQ9P2K1 1620 aa30.26■■■□□ 2.44
FAM49B-214ENST00000519540 FAM9AQ8IZU1 332 aaPredicted RBP30.2■■■□□ 2.42
FAM49B-214ENST00000519540 WRNQ14191 1432 aaPredicted RBP eCLIP30.11■■■□□ 2.41
FAM49B-214ENST00000519540 CFTRP13569 1480 aa30■■■□□ 2.39
FAM49B-214ENST00000519540 SYNJ1O43426 1573 aa29.98■■■□□ 2.39
FAM49B-214ENST00000519540 SOGA1O94964 1423 aa29.89■■■□□ 2.37
FAM49B-214ENST00000519540 CADPSQ9ULU8 1353 aa29.83■■■□□ 2.37
FAM49B-214ENST00000519540 EEA1Q15075 1411 aa29.82■■■□□ 2.36
FAM49B-214ENST00000519540 TOP2BQ02880 1626 aa29.81■■■□□ 2.36
FAM49B-214ENST00000519540 PRDM2Q13029 1718 aa29.81■■■□□ 2.36
FAM49B-214ENST00000519540 EHMT2Q96KQ7 1210 aa29.79■■■□□ 2.36
FAM49B-214ENST00000519540 RUSC2Q8N2Y8 1516 aa29.77■■■□□ 2.36
FAM49B-214ENST00000519540 BIVM-ERCC5R4GMW8 1640 aa29.76■■■□□ 2.35
FAM49B-214ENST00000519540 CSRNP3Q8WYN3 585 aa29.7■■■□□ 2.34
FAM49B-214ENST00000519540 CUX1P39880 1505 aa29.67■■■□□ 2.34
FAM49B-214ENST00000519540 DNAJC5BQ9UF47 199 aa29.5■■■□□ 2.31
FAM49B-214ENST00000519540 FANCD2Q9BXW9 1451 aa29.5■■■□□ 2.31
FAM49B-214ENST00000519540 NESP48681 1621 aa29.5■■■□□ 2.31
FAM49B-214ENST00000519540 LAMC3Q9Y6N6 1575 aa29.46■■■□□ 2.31
FAM49B-214ENST00000519540 GOLGA3Q08378 1498 aa29.44■■■□□ 2.3
FAM49B-214ENST00000519540 TNIKQ9UKE5 1360 aa29.44■■■□□ 2.3
FAM49B-214ENST00000519540 KIF21BO75037 1637 aa29.42■■■□□ 2.3
FAM49B-214ENST00000519540 CEP164Q9UPV0 1460 aa29.41■■■□□ 2.3
FAM49B-214ENST00000519540 UBTFP17480 764 aaKnown RBP29.36■■■□□ 2.29
FAM49B-214ENST00000519540 CEP162Q5TB80 1403 aa29.31■■■□□ 2.28
FAM49B-214ENST00000519540 KIF27Q86VH2 1401 aa29.31■■■□□ 2.28
FAM49B-214ENST00000519540 FGD5Q6ZNL6 1462 aa29.29■■■□□ 2.28
FAM49B-214ENST00000519540 PCGF6Q9BYE7 350 aa29.28■■■□□ 2.28
FAM49B-214ENST00000519540 DNMBPQ6XZF7 1577 aa29.27■■■□□ 2.28
FAM49B-214ENST00000519540 RAPGEF2Q9Y4G8 1499 aa29.24■■■□□ 2.27
FAM49B-214ENST00000519540 PDS5BQ9NTI5 1447 aa29.24■■■□□ 2.27
FAM49B-214ENST00000519540 TOPBP1Q92547 1522 aa29.22■■■□□ 2.27
FAM49B-214ENST00000519540 PRXQ9BXM0 1461 aa29.21■■■□□ 2.27
FAM49B-214ENST00000519540 CUX2O14529 1486 aa29.17■■■□□ 2.26
FAM49B-214ENST00000519540 TRIM26Q12899 539 aaPredicted RBP29.16■■■□□ 2.26
FAM49B-214ENST00000519540 ERICH3Q5RHP9 1530 aa29.16■■■□□ 2.26
FAM49B-214ENST00000519540 URB2Q14146 1524 aaKnown RBP29.12■■■□□ 2.25
FAM49B-214ENST00000519540 POLA1P09884 1462 aaPredicted RBP29.1■■■□□ 2.25
FAM49B-214ENST00000519540 KIF21AQ7Z4S6 1674 aa29.1■■■□□ 2.25
FAM49B-214ENST00000519540 IGF1RP08069 1367 aa29.06■■■□□ 2.24
FAM49B-214ENST00000519540 RAD54L2Q9Y4B4 1467 aa29.04■■■□□ 2.24
FAM49B-214ENST00000519540 ABCA10Q8WWZ4 1543 aa29.03■■■□□ 2.24
FAM49B-214ENST00000519540 CLIP1P30622 1438 aa29.01■■■□□ 2.23
FAM49B-214ENST00000519540 CARMIL1Q5VZK9 1371 aa28.9■■■□□ 2.22
FAM49B-214ENST00000519540 PPARGC1BQ86YN6 1023 aaKnown RBP28.89■■■□□ 2.22
FAM49B-214ENST00000519540 WDR97A6NE52 1622 aa28.88■■■□□ 2.21
FAM49B-214ENST00000519540 MRC2Q9UBG0 1479 aa28.83■■■□□ 2.21
FAM49B-214ENST00000519540 RANGAP1P46060 587 aaPredicted RBP28.82■■■□□ 2.2
FAM49B-214ENST00000519540 VPS8Q8N3P4 1428 aa28.79■■■□□ 2.2
FAM49B-214ENST00000519540 ABCA5Q8WWZ7 1642 aa28.76■■■□□ 2.19
FAM49B-214ENST00000519540 TARBP1Q13395 1621 aaKnown RBP28.75■■■□□ 2.19
FAM49B-214ENST00000519540 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
FAM49B-214ENST00000519540 CUL7Q14999 1698 aa28.73■■■□□ 2.19
FAM49B-214ENST00000519540 GAPVD1Q14C86 1478 aa28.7■■■□□ 2.18
FAM49B-214ENST00000519540 HRCP23327 699 aa28.69■■■□□ 2.18
FAM49B-214ENST00000519540 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
FAM49B-214ENST00000519540 WDR62O43379 1518 aa28.66■■■□□ 2.18
FAM49B-214ENST00000519540 ERCC6Q03468 1493 aa28.62■■■□□ 2.17
FAM49B-214ENST00000519540 ARHGAP35Q9NRY4 1499 aa28.62■■■□□ 2.17
FAM49B-214ENST00000519540 TTBK1Q5TCY1 1321 aaPredicted RBP28.58■■■□□ 2.17
FAM49B-214ENST00000519540 IFT140Q96RY7 1462 aa28.54■■■□□ 2.16
FAM49B-214ENST00000519540 APLP2Q06481 763 aa28.53■■■□□ 2.16
FAM49B-214ENST00000519540 THOC2Q8NI27 1593 aaKnown RBP28.51■■■□□ 2.15
FAM49B-214ENST00000519540 AQRO60306 1485 aaKnown RBP eCLIP28.5■■■□□ 2.159e-8■■■■■ 31.5
FAM49B-214ENST00000519540 PBRM1Q86U86 1689 aa28.49■■■□□ 2.15
FAM49B-214ENST00000519540 CTTNBP2Q8WZ74 1663 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms