RNA–Protein interactions for RNA: ENST00000513801.5

ATP2C1-221, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-221ENST00000513801 NISCHQ9Y2I1 1504 aa22.07■■□□□ 1.12
ATP2C1-221ENST00000513801 HRCP23327 699 aa21.35■■□□□ 1.01
ATP2C1-221ENST00000513801 PPARGC1BQ86YN6 1023 aaKnown RBP21.32■■□□□ 1
ATP2C1-221ENST00000513801 PCGF6Q9BYE7 350 aa21■□□□□ 0.95
ATP2C1-221ENST00000513801 PELP1Q8IZL8 1130 aaKnown RBP20.83■□□□□ 0.93
ATP2C1-221ENST00000513801 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
ATP2C1-221ENST00000513801 SHROOM4Q9ULL8 1493 aa20.6■□□□□ 0.89
ATP2C1-221ENST00000513801 SCAF1Q9H7N4 1312 aaKnown RBP20.6■□□□□ 0.89
ATP2C1-221ENST00000513801 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
ATP2C1-221ENST00000513801 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
ATP2C1-221ENST00000513801 LOC105371045A0A1W2PR82 267 aa20.08■□□□□ 0.81
ATP2C1-221ENST00000513801 MYT1Q01538 1121 aa19.97■□□□□ 0.79
ATP2C1-221ENST00000513801 NEUROD1Q13562 356 aa19.91■□□□□ 0.78
ATP2C1-221ENST00000513801 TRIM26Q12899 539 aaPredicted RBP19.89■□□□□ 0.77
ATP2C1-221ENST00000513801 GTF3C3Q9Y5Q9 886 aa19.83■□□□□ 0.77
ATP2C1-221ENST00000513801 ACIN1Q9UKV3 1341 aaKnown RBP19.81■□□□□ 0.76
ATP2C1-221ENST00000513801 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
ATP2C1-221ENST00000513801 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
ATP2C1-221ENST00000513801 CCDC180Q9P1Z9 1646 aa19.51■□□□□ 0.71
ATP2C1-221ENST00000513801 EHMT2Q96KQ7 1210 aa19.44■□□□□ 0.7
ATP2C1-221ENST00000513801 CENPBP07199 599 aaPredicted RBP19.39■□□□□ 0.69
ATP2C1-221ENST00000513801 YTHDC1Q96MU7 727 aaKnown RBP19.36■□□□□ 0.69
ATP2C1-221ENST00000513801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
ATP2C1-221ENST00000513801 DIEXFQ68CQ4 756 aaKnown RBP19.32■□□□□ 0.68
ATP2C1-221ENST00000513801 FAM9AQ8IZU1 332 aaPredicted RBP19.23■□□□□ 0.67
ATP2C1-221ENST00000513801 BCL11AQ9H165 835 aa19.21■□□□□ 0.66
ATP2C1-221ENST00000513801 CCER1Q8TC90 406 aaPredicted RBP19.18■□□□□ 0.66
ATP2C1-221ENST00000513801 DCAF8L2P0C7V8 631 aa19.15■□□□□ 0.66
ATP2C1-221ENST00000513801 TTBK1Q5TCY1 1321 aaPredicted RBP18.99■□□□□ 0.63
ATP2C1-221ENST00000513801 MIER1Q8N108 512 aa18.9■□□□□ 0.62
ATP2C1-221ENST00000513801 TRIM41Q8WV44 630 aa18.86■□□□□ 0.61
ATP2C1-221ENST00000513801 CSRNP3Q8WYN3 585 aa18.86■□□□□ 0.61
ATP2C1-221ENST00000513801 ANP32EQ9BTT0 268 aa18.85■□□□□ 0.61
ATP2C1-221ENST00000513801 ZCCHC6Q5VYS8 1495 aaKnown RBP18.79■□□□□ 0.6
ATP2C1-221ENST00000513801 ZNF316A6NFI3 1004 aaPredicted RBP18.76■□□□□ 0.59
ATP2C1-221ENST00000513801 TSHZ2Q9NRE2 1034 aa18.72■□□□□ 0.59
ATP2C1-221ENST00000513801 PRKCSHP14314 528 aaPredicted RBP18.7■□□□□ 0.58
ATP2C1-221ENST00000513801 SUPT16HQ9Y5B9 1047 aaKnown RBP18.68■□□□□ 0.58
ATP2C1-221ENST00000513801 BCANQ96GW7 911 aa18.53■□□□□ 0.56
ATP2C1-221ENST00000513801 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
ATP2C1-221ENST00000513801 KCNH8Q96L42 1107 aa18.25■□□□□ 0.51
ATP2C1-221ENST00000513801 RBM19Q9Y4C8 960 aaKnown RBP18.24■□□□□ 0.51
ATP2C1-221ENST00000513801 ITGAEP38570 1179 aa18.23■□□□□ 0.51
ATP2C1-221ENST00000513801 MSH5O43196 834 aa18.21■□□□□ 0.51
ATP2C1-221ENST00000513801 FKBP8Q14318 412 aa18.19■□□□□ 0.5
ATP2C1-221ENST00000513801 ANO8Q9HCE9 1232 aaPredicted RBP18.14■□□□□ 0.49
ATP2C1-221ENST00000513801 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
ATP2C1-221ENST00000513801 RSF1Q96T23 1441 aaPredicted RBP18.09■□□□□ 0.49
ATP2C1-221ENST00000513801 CLSPNQ9HAW4 1339 aa18.09■□□□□ 0.49
ATP2C1-221ENST00000513801 CCDC136Q96JN2 1154 aa17.94■□□□□ 0.46
ATP2C1-221ENST00000513801 CEP162Q5TB80 1403 aa17.93■□□□□ 0.46
ATP2C1-221ENST00000513801 ERICH6Q7L0X2 663 aa17.93■□□□□ 0.46
ATP2C1-221ENST00000513801 DEKP35659 375 aaKnown RBP17.92■□□□□ 0.46
ATP2C1-221ENST00000513801 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
ATP2C1-221ENST00000513801 SALL2Q9Y467 1007 aaPredicted RBP17.89■□□□□ 0.46
ATP2C1-221ENST00000513801 ABCC9O60706 1549 aa17.89■□□□□ 0.45
ATP2C1-221ENST00000513801 TRIM52Q96A61 297 aa17.88■□□□□ 0.45
ATP2C1-221ENST00000513801 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.45
ATP2C1-221ENST00000513801 IRX6P78412 446 aaPredicted RBP17.84■□□□□ 0.45
ATP2C1-221ENST00000513801 NEFLP07196 543 aa17.83■□□□□ 0.44
ATP2C1-221ENST00000513801 RANGAP1P46060 587 aaPredicted RBP17.82■□□□□ 0.44
ATP2C1-221ENST00000513801 NBR1Q14596 966 aa17.8■□□□□ 0.44
ATP2C1-221ENST00000513801 RTN4Q9NQC3 1192 aaKnown RBP17.76■□□□□ 0.43
ATP2C1-221ENST00000513801 DDX10Q13206 875 aaKnown RBP17.74■□□□□ 0.43
ATP2C1-221ENST00000513801 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.74■□□□□ 0.43
ATP2C1-221ENST00000513801 APLP2Q06481 763 aa17.73■□□□□ 0.43
ATP2C1-221ENST00000513801 SOGA1O94964 1423 aa17.7■□□□□ 0.42
ATP2C1-221ENST00000513801 HIRIP3Q9BW71 556 aaPredicted RBP17.69■□□□□ 0.42
ATP2C1-221ENST00000513801 FANCIQ9NVI1 1328 aa17.67■□□□□ 0.42
ATP2C1-221ENST00000513801 CCDC88BA6NC98 1476 aa17.67■□□□□ 0.42
ATP2C1-221ENST00000513801 ABCC8Q09428 1581 aa17.67■□□□□ 0.42
ATP2C1-221ENST00000513801 IL27Q8NEV9 243 aa17.66■□□□□ 0.42
ATP2C1-221ENST00000513801 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
ATP2C1-221ENST00000513801 DHX57Q6P158 1386 aaKnown RBP17.64■□□□□ 0.41
ATP2C1-221ENST00000513801 CDK11AQ9UQ88 783 aaPredicted RBP17.63■□□□□ 0.41
ATP2C1-221ENST00000513801 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
ATP2C1-221ENST00000513801 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
ATP2C1-221ENST00000513801 PAK3O75914 559 aaPredicted RBP17.61■□□□□ 0.41
ATP2C1-221ENST00000513801 CECR2Q9BXF3 1484 aa17.58■□□□□ 0.4
ATP2C1-221ENST00000513801 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.39
ATP2C1-221ENST00000513801 B4GALNT3Q6L9W6 998 aa17.46■□□□□ 0.38
ATP2C1-221ENST00000513801 NOP58Q9Y2X3 529 aaKnown RBP17.45■□□□□ 0.38
ATP2C1-221ENST00000513801 MYT1LQ9UL68 1186 aa17.44■□□□□ 0.38
ATP2C1-221ENST00000513801 WIZO95785 1651 aa17.42■□□□□ 0.38
ATP2C1-221ENST00000513801 HNRNPUQ00839 825 aaKnown RBP eCLIP17.41■□□□□ 0.38
ATP2C1-221ENST00000513801 SIN3AQ96ST3 1273 aa17.4■□□□□ 0.38
ATP2C1-221ENST00000513801 CLIP1P30622 1438 aa17.39■□□□□ 0.37
ATP2C1-221ENST00000513801 PPP1R15AO75807 674 aaPredicted RBP17.38■□□□□ 0.37
ATP2C1-221ENST00000513801 UBE2Q2Q8WVN8 375 aa17.37■□□□□ 0.37
ATP2C1-221ENST00000513801 ANP32CO43423 234 aa17.37■□□□□ 0.37
ATP2C1-221ENST00000513801 KANK4Q5T7N3 995 aaPredicted RBP17.37■□□□□ 0.37
ATP2C1-221ENST00000513801 EIF5BO60841 1220 aaKnown RBP17.36■□□□□ 0.37
ATP2C1-221ENST00000513801 ERICH6BQ5W0A0 696 aa17.33■□□□□ 0.37
ATP2C1-221ENST00000513801 GOLGA3Q08378 1498 aa17.33■□□□□ 0.36
ATP2C1-221ENST00000513801 RTL5Q5HYW3 569 aaPredicted RBP17.33■□□□□ 0.36
ATP2C1-221ENST00000513801 NACADO15069 1562 aa17.29■□□□□ 0.36
ATP2C1-221ENST00000513801 BAZ1BQ9UIG0 1483 aaKnown RBP17.29■□□□□ 0.36
ATP2C1-221ENST00000513801 VPS8Q8N3P4 1428 aa17.28■□□□□ 0.36
ATP2C1-221ENST00000513801 PPP4R2Q9NY27 417 aa17.27■□□□□ 0.35
ATP2C1-221ENST00000513801 EIF4G1Q04637 1599 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms