RNA–Protein interactions for RNA: ENST00000522941.5

FAM49B-224, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 1,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-224ENST00000522941 NISCHQ9Y2I1 1504 aa38.49■■■■□ 3.75
FAM49B-224ENST00000522941 CCDC180Q9P1Z9 1646 aa33.87■■■■□ 3.01
FAM49B-224ENST00000522941 ABCC9O60706 1549 aa32.57■■■□□ 2.8
FAM49B-224ENST00000522941 ZCCHC6Q5VYS8 1495 aaKnown RBP32.2■■■□□ 2.75
FAM49B-224ENST00000522941 DCAF8L2P0C7V8 631 aa31.94■■■□□ 2.7
FAM49B-224ENST00000522941 DCAF1Q9Y4B6 1507 aa31.83■■■□□ 2.69
FAM49B-224ENST00000522941 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.66
FAM49B-224ENST00000522941 NACADO15069 1562 aa31.68■■■□□ 2.66
FAM49B-224ENST00000522941 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
FAM49B-224ENST00000522941 SCRIBQ14160 1630 aa31.03■■■□□ 2.56
FAM49B-224ENST00000522941 UNC13AQ9UPW8 1703 aa30.96■■■□□ 2.55
FAM49B-224ENST00000522941 SHROOM4Q9ULL8 1493 aa30.9■■■□□ 2.54
FAM49B-224ENST00000522941 BICRAQ9NZM4 1560 aa30.65■■■□□ 2.5
FAM49B-224ENST00000522941 PABPN1Q86U42 306 aaKnown RBP eCLIP30.58■■■□□ 2.49
FAM49B-224ENST00000522941 CECR2Q9BXF3 1484 aa29.96■■■□□ 2.39
FAM49B-224ENST00000522941 EIF4G1Q04637 1599 aaKnown RBP29.76■■■□□ 2.35
FAM49B-224ENST00000522941 BAZ1AQ9NRL2 1556 aaPredicted RBP29.76■■■□□ 2.35
FAM49B-224ENST00000522941 SMARCA4P51532 1647 aa29.72■■■□□ 2.35
FAM49B-224ENST00000522941 MROH2BQ7Z745 1585 aa29.71■■■□□ 2.35
FAM49B-224ENST00000522941 RSF1Q96T23 1441 aaPredicted RBP29.6■■■□□ 2.33
FAM49B-224ENST00000522941 CC2D2AQ9P2K1 1620 aa29.48■■■□□ 2.31
FAM49B-224ENST00000522941 WIZO95785 1651 aa29.45■■■□□ 2.3
FAM49B-224ENST00000522941 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
FAM49B-224ENST00000522941 PEG3Q9GZU2 1588 aa29.4■■■□□ 2.3
FAM49B-224ENST00000522941 ATAD2BQ9ULI0 1458 aa29.39■■■□□ 2.3
FAM49B-224ENST00000522941 DNAJC5BQ9UF47 199 aa29.34■■■□□ 2.29
FAM49B-224ENST00000522941 SMARCA2P51531 1590 aa29.34■■■□□ 2.29
FAM49B-224ENST00000522941 NCAPD3P42695 1498 aa29.25■■■□□ 2.27
FAM49B-224ENST00000522941 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
FAM49B-224ENST00000522941 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
FAM49B-224ENST00000522941 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
FAM49B-224ENST00000522941 CCDC88BA6NC98 1476 aa28.8■■■□□ 2.2
FAM49B-224ENST00000522941 CADPSQ9ULU8 1353 aa28.44■■■□□ 2.14
FAM49B-224ENST00000522941 CFTRP13569 1480 aa28.42■■■□□ 2.14
FAM49B-224ENST00000522941 NESP48681 1621 aa28.41■■■□□ 2.14
FAM49B-224ENST00000522941 LAMC3Q9Y6N6 1575 aa28.36■■■□□ 2.13
FAM49B-224ENST00000522941 PRDM2Q13029 1718 aa28.27■■■□□ 2.12
FAM49B-224ENST00000522941 PDS5BQ9NTI5 1447 aa28.13■■■□□ 2.09
FAM49B-224ENST00000522941 FANCD2Q9BXW9 1451 aa28.12■■■□□ 2.09
FAM49B-224ENST00000522941 KIF21AQ7Z4S6 1674 aa28.09■■■□□ 2.09
FAM49B-224ENST00000522941 CEP164Q9UPV0 1460 aa28■■■□□ 2.07
FAM49B-224ENST00000522941 ABCC8Q09428 1581 aa28■■■□□ 2.07
FAM49B-224ENST00000522941 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
FAM49B-224ENST00000522941 WRNQ14191 1432 aaPredicted RBP eCLIP27.87■■■□□ 2.05
FAM49B-224ENST00000522941 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
FAM49B-224ENST00000522941 CUX1P39880 1505 aa27.82■■■□□ 2.04
FAM49B-224ENST00000522941 URB2Q14146 1524 aaKnown RBP27.82■■■□□ 2.04
FAM49B-224ENST00000522941 MRC2Q9UBG0 1479 aa27.81■■■□□ 2.04
FAM49B-224ENST00000522941 SYNJ1O43426 1573 aa27.81■■■□□ 2.04
FAM49B-224ENST00000522941 THOC2Q8NI27 1593 aaKnown RBP27.79■■■□□ 2.04
FAM49B-224ENST00000522941 TOPBP1Q92547 1522 aa27.76■■■□□ 2.03
FAM49B-224ENST00000522941 DNMBPQ6XZF7 1577 aa27.76■■■□□ 2.03
FAM49B-224ENST00000522941 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
FAM49B-224ENST00000522941 BIVM-ERCC5R4GMW8 1640 aa27.73■■■□□ 2.03
FAM49B-224ENST00000522941 WDR62O43379 1518 aa27.71■■■□□ 2.03
FAM49B-224ENST00000522941 TRIM41Q8WV44 630 aa27.7■■■□□ 2.03
FAM49B-224ENST00000522941 FGD5Q6ZNL6 1462 aa27.61■■■□□ 2.01
FAM49B-224ENST00000522941 POLA1P09884 1462 aaPredicted RBP27.58■■■□□ 2
FAM49B-224ENST00000522941 CUX2O14529 1486 aa27.5■■□□□ 1.99
FAM49B-224ENST00000522941 RAD54L2Q9Y4B4 1467 aa27.48■■□□□ 1.99
FAM49B-224ENST00000522941 SOGA1O94964 1423 aa27.46■■□□□ 1.99
FAM49B-224ENST00000522941 TARBP1Q13395 1621 aaKnown RBP27.42■■□□□ 1.98
FAM49B-224ENST00000522941 IFT140Q96RY7 1462 aa27.37■■□□□ 1.97
FAM49B-224ENST00000522941 WDR97A6NE52 1622 aa27.36■■□□□ 1.97
FAM49B-224ENST00000522941 ABCA10Q8WWZ4 1543 aa27.35■■□□□ 1.97
FAM49B-224ENST00000522941 RUSC2Q8N2Y8 1516 aa27.28■■□□□ 1.96
FAM49B-224ENST00000522941 ZNF608Q9ULD9 1512 aaPredicted RBP27.26■■□□□ 1.96
FAM49B-224ENST00000522941 TDRD9Q8NDG6 1382 aaKnown RBP27.26■■□□□ 1.95
FAM49B-224ENST00000522941 KIF27Q86VH2 1401 aa27.21■■□□□ 1.95
FAM49B-224ENST00000522941 AQRO60306 1485 aaKnown RBP eCLIP27.2■■□□□ 1.959e-8■■■■■ 31.5
FAM49B-224ENST00000522941 ABCA5Q8WWZ7 1642 aa27.2■■□□□ 1.94
FAM49B-224ENST00000522941 FAM9AQ8IZU1 332 aaPredicted RBP27.16■■□□□ 1.94
FAM49B-224ENST00000522941 EIF4G3O43432 1585 aaKnown RBP27.16■■□□□ 1.94
FAM49B-224ENST00000522941 GAPVD1Q14C86 1478 aa27.15■■□□□ 1.94
FAM49B-224ENST00000522941 EEA1Q15075 1411 aa27.11■■□□□ 1.93
FAM49B-224ENST00000522941 PBRM1Q86U86 1689 aa27.07■■□□□ 1.92
FAM49B-224ENST00000522941 IGF1RP08069 1367 aa27.06■■□□□ 1.92
FAM49B-224ENST00000522941 CSRNP3Q8WYN3 585 aa27.04■■□□□ 1.92
FAM49B-224ENST00000522941 GRIN2BQ13224 1484 aa27.03■■□□□ 1.92
FAM49B-224ENST00000522941 ERICH3Q5RHP9 1530 aa27.02■■□□□ 1.92
FAM49B-224ENST00000522941 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
FAM49B-224ENST00000522941 CUL7Q14999 1698 aa26.9■■□□□ 1.9
FAM49B-224ENST00000522941 CARMIL1Q5VZK9 1371 aa26.89■■□□□ 1.9
FAM49B-224ENST00000522941 PRXQ9BXM0 1461 aa26.89■■□□□ 1.9
FAM49B-224ENST00000522941 MAGI1Q96QZ7 1491 aaPredicted RBP26.88■■□□□ 1.89
FAM49B-224ENST00000522941 ADAMTS12P58397 1594 aa26.87■■□□□ 1.89
FAM49B-224ENST00000522941 FHAD1B1AJZ9 1412 aa26.84■■□□□ 1.89
FAM49B-224ENST00000522941 KIF21BO75037 1637 aa26.82■■□□□ 1.88
FAM49B-224ENST00000522941 RAPGEF2Q9Y4G8 1499 aa26.8■■□□□ 1.88
FAM49B-224ENST00000522941 EHMT2Q96KQ7 1210 aa26.8■■□□□ 1.88
FAM49B-224ENST00000522941 SYNJ2O15056 1496 aa26.78■■□□□ 1.88
FAM49B-224ENST00000522941 LOC105371045A0A1W2PR82 267 aa26.76■■□□□ 1.87
FAM49B-224ENST00000522941 FBLN2P98095 1184 aa26.73■■□□□ 1.87
FAM49B-224ENST00000522941 CHMP7Q8WUX9 453 aaPredicted RBP26.73■■□□□ 1.87
FAM49B-224ENST00000522941 GOLGA3Q08378 1498 aa26.71■■□□□ 1.87
FAM49B-224ENST00000522941 CHD1O14646 1710 aa26.71■■□□□ 1.87
FAM49B-224ENST00000522941 GRIN2AQ12879 1464 aa26.71■■□□□ 1.87
FAM49B-224ENST00000522941 UBTFP17480 764 aaKnown RBP26.61■■□□□ 1.85
FAM49B-224ENST00000522941 CEP170Q5SW79 1584 aa26.58■■□□□ 1.85
FAM49B-224ENST00000522941 NUP160Q12769 1436 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms