RNA–Protein interactions for RNA: ENST00000555501.1

ZFYVE21-209, Transcript of zinc finger FYVE-type containing 21, humanhuman

TSL 1 (best)

Gene ZFYVE21, Length 4,453 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE21-209ENST00000555501 NISCHQ9Y2I1 1504 aa25.55■■□□□ 1.68
ZFYVE21-209ENST00000555501 DCAF8L2P0C7V8 631 aa24.02■■□□□ 1.44
ZFYVE21-209ENST00000555501 SHROOM4Q9ULL8 1493 aa22.85■■□□□ 1.25
ZFYVE21-209ENST00000555501 SUPT5HO00267 1087 aaKnown RBP22.65■■□□□ 1.22
ZFYVE21-209ENST00000555501 ABCC9O60706 1549 aa21.75■■□□□ 1.07
ZFYVE21-209ENST00000555501 CCDC180Q9P1Z9 1646 aa21.45■■□□□ 1.03
ZFYVE21-209ENST00000555501 EHMT2Q96KQ7 1210 aa21.32■■□□□ 1
ZFYVE21-209ENST00000555501 ZCCHC6Q5VYS8 1495 aaKnown RBP21.25■□□□□ 0.99
ZFYVE21-209ENST00000555501 PELP1Q8IZL8 1130 aaKnown RBP21.23■□□□□ 0.99
ZFYVE21-209ENST00000555501 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
ZFYVE21-209ENST00000555501 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
ZFYVE21-209ENST00000555501 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
ZFYVE21-209ENST00000555501 MYT1Q01538 1121 aa20.87■□□□□ 0.93
ZFYVE21-209ENST00000555501 SCRIBQ14160 1630 aa20.81■□□□□ 0.92
ZFYVE21-209ENST00000555501 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
ZFYVE21-209ENST00000555501 APLP2Q06481 763 aa20.65■□□□□ 0.9
ZFYVE21-209ENST00000555501 RB1CC1Q8TDY2 1594 aa20.61■□□□□ 0.89
ZFYVE21-209ENST00000555501 RANGAP1P46060 587 aaPredicted RBP20.6■□□□□ 0.89
ZFYVE21-209ENST00000555501 NACADO15069 1562 aa20.59■□□□□ 0.89
ZFYVE21-209ENST00000555501 UBTFP17480 764 aaKnown RBP20.59■□□□□ 0.89
ZFYVE21-209ENST00000555501 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
ZFYVE21-209ENST00000555501 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
ZFYVE21-209ENST00000555501 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
ZFYVE21-209ENST00000555501 PCGF6Q9BYE7 350 aa20.37■□□□□ 0.85
ZFYVE21-209ENST00000555501 ATP1B4Q9UN42 357 aaPredicted RBP20.27■□□□□ 0.83
ZFYVE21-209ENST00000555501 RSF1Q96T23 1441 aaPredicted RBP20.2■□□□□ 0.82
ZFYVE21-209ENST00000555501 HRCP23327 699 aa20.17■□□□□ 0.82
ZFYVE21-209ENST00000555501 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
ZFYVE21-209ENST00000555501 PPARGC1BQ86YN6 1023 aaKnown RBP20.12■□□□□ 0.81
ZFYVE21-209ENST00000555501 CECR2Q9BXF3 1484 aa20.04■□□□□ 0.8
ZFYVE21-209ENST00000555501 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
ZFYVE21-209ENST00000555501 TRIM26Q12899 539 aaPredicted RBP19.88■□□□□ 0.77
ZFYVE21-209ENST00000555501 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
ZFYVE21-209ENST00000555501 CENPBP07199 599 aaPredicted RBP19.85■□□□□ 0.77
ZFYVE21-209ENST00000555501 CCER1Q8TC90 406 aaPredicted RBP19.84■□□□□ 0.77
ZFYVE21-209ENST00000555501 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.76
ZFYVE21-209ENST00000555501 MROH2BQ7Z745 1585 aa19.79■□□□□ 0.76
ZFYVE21-209ENST00000555501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.75■□□□□ 0.75
ZFYVE21-209ENST00000555501 HNRNPUL2Q1KMD3 747 aaKnown RBP19.75■□□□□ 0.75
ZFYVE21-209ENST00000555501 ZEB1P37275 1124 aaPredicted RBP19.71■□□□□ 0.75
ZFYVE21-209ENST00000555501 FBLN2P98095 1184 aa19.65■□□□□ 0.74
ZFYVE21-209ENST00000555501 ITGAEP38570 1179 aa19.64■□□□□ 0.73
ZFYVE21-209ENST00000555501 WRNQ14191 1432 aaPredicted RBP eCLIP19.53■□□□□ 0.722e-6■■■■□ 22.3
ZFYVE21-209ENST00000555501 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
ZFYVE21-209ENST00000555501 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
ZFYVE21-209ENST00000555501 CCDC88BA6NC98 1476 aa19.5■□□□□ 0.71
ZFYVE21-209ENST00000555501 WIZO95785 1651 aa19.49■□□□□ 0.71
ZFYVE21-209ENST00000555501 YTHDC1Q96MU7 727 aaKnown RBP19.45■□□□□ 0.7
ZFYVE21-209ENST00000555501 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
ZFYVE21-209ENST00000555501 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
ZFYVE21-209ENST00000555501 ERICH6Q7L0X2 663 aa19.39■□□□□ 0.69
ZFYVE21-209ENST00000555501 TOP2AP11388 1531 aaKnown RBP19.39■□□□□ 0.69
ZFYVE21-209ENST00000555501 FAM50AQ14320 339 aaKnown RBP19.36■□□□□ 0.69
ZFYVE21-209ENST00000555501 EEA1Q15075 1411 aa19.35■□□□□ 0.69
ZFYVE21-209ENST00000555501 MYT1LQ9UL68 1186 aa19.32■□□□□ 0.68
ZFYVE21-209ENST00000555501 ARID3CA6NKF2 412 aa19.28■□□□□ 0.68
ZFYVE21-209ENST00000555501 GTF3C3Q9Y5Q9 886 aa19.28■□□□□ 0.68
ZFYVE21-209ENST00000555501 KIF27Q86VH2 1401 aa19.25■□□□□ 0.67
ZFYVE21-209ENST00000555501 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
ZFYVE21-209ENST00000555501 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
ZFYVE21-209ENST00000555501 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.66
ZFYVE21-209ENST00000555501 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
ZFYVE21-209ENST00000555501 GOLGA3Q08378 1498 aa19.19■□□□□ 0.66
ZFYVE21-209ENST00000555501 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
ZFYVE21-209ENST00000555501 SOGA1O94964 1423 aa19.18■□□□□ 0.66
ZFYVE21-209ENST00000555501 CLIP1P30622 1438 aa19.18■□□□□ 0.66
ZFYVE21-209ENST00000555501 PDS5BQ9NTI5 1447 aa19.12■□□□□ 0.65
ZFYVE21-209ENST00000555501 CEP162Q5TB80 1403 aa19.11■□□□□ 0.65
ZFYVE21-209ENST00000555501 CEP164Q9UPV0 1460 aa19.11■□□□□ 0.65
ZFYVE21-209ENST00000555501 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
ZFYVE21-209ENST00000555501 CDK11AQ9UQ88 783 aaPredicted RBP19.1■□□□□ 0.65
ZFYVE21-209ENST00000555501 TNIKQ9UKE5 1360 aa19.1■□□□□ 0.65
ZFYVE21-209ENST00000555501 CUX2O14529 1486 aa19.08■□□□□ 0.65
ZFYVE21-209ENST00000555501 NCAPD3P42695 1498 aa19.08■□□□□ 0.65
ZFYVE21-209ENST00000555501 TRIM52Q96A61 297 aa19.06■□□□□ 0.64
ZFYVE21-209ENST00000555501 BICRAQ9NZM4 1560 aa19.02■□□□□ 0.64
ZFYVE21-209ENST00000555501 CARMIL1Q5VZK9 1371 aa19■□□□□ 0.63
ZFYVE21-209ENST00000555501 ACIN1Q9UKV3 1341 aaKnown RBP19■□□□□ 0.63
ZFYVE21-209ENST00000555501 ZNF777Q9ULD5 760 aaPredicted RBP18.98■□□□□ 0.63
ZFYVE21-209ENST00000555501 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
ZFYVE21-209ENST00000555501 NEUROD1Q13562 356 aa18.93■□□□□ 0.62
ZFYVE21-209ENST00000555501 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
ZFYVE21-209ENST00000555501 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
ZFYVE21-209ENST00000555501 NPM1P06748 294 aaKnown RBP eCLIP18.85■□□□□ 0.61
ZFYVE21-209ENST00000555501 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
ZFYVE21-209ENST00000555501 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
ZFYVE21-209ENST00000555501 POLR3GLQ9BT43 218 aa18.82■□□□□ 0.6
ZFYVE21-209ENST00000555501 RUSC2Q8N2Y8 1516 aa18.79■□□□□ 0.6
ZFYVE21-209ENST00000555501 DIEXFQ68CQ4 756 aaKnown RBP18.79■□□□□ 0.6
ZFYVE21-209ENST00000555501 HMGXB3Q12766 1538 aa18.76■□□□□ 0.59
ZFYVE21-209ENST00000555501 CHIC2Q9UKJ5 165 aa18.75■□□□□ 0.59
ZFYVE21-209ENST00000555501 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
ZFYVE21-209ENST00000555501 CFTRP13569 1480 aa18.73■□□□□ 0.59
ZFYVE21-209ENST00000555501 PLEKHD1A6NEE1 506 aa18.72■□□□□ 0.59
ZFYVE21-209ENST00000555501 NEFLP07196 543 aa18.72■□□□□ 0.59
ZFYVE21-209ENST00000555501 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
ZFYVE21-209ENST00000555501 RAPGEF2Q9Y4G8 1499 aa18.69■□□□□ 0.58
ZFYVE21-209ENST00000555501 FHAD1B1AJZ9 1412 aa18.68■□□□□ 0.58
ZFYVE21-209ENST00000555501 FGD5Q6ZNL6 1462 aa18.67■□□□□ 0.58
ZFYVE21-209ENST00000555501 KCNH8Q96L42 1107 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms