RNA–Protein interactions for RNA: ENST00000418388.5

TMEM250-201, Transcript of transmembrane protein 250, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM250, Length 2,823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM250-201ENST00000418388 NISCHQ9Y2I1 1504 aa38.1■■■■□ 3.69
TMEM250-201ENST00000418388 SHROOM4Q9ULL8 1493 aa33.25■■■□□ 2.91
TMEM250-201ENST00000418388 SUPT5HO00267 1087 aaKnown RBP32.7■■■□□ 2.83
TMEM250-201ENST00000418388 ZCCHC6Q5VYS8 1495 aaKnown RBP32.27■■■□□ 2.76
TMEM250-201ENST00000418388 DCAF8L2P0C7V8 631 aa32.03■■■□□ 2.72
TMEM250-201ENST00000418388 CCDC180Q9P1Z9 1646 aa32.03■■■□□ 2.72
TMEM250-201ENST00000418388 MYO15BQ96JP2 1530 aa31.82■■■□□ 2.68
TMEM250-201ENST00000418388 CHIC1Q5VXU3 224 aa31.73■■■□□ 2.67
TMEM250-201ENST00000418388 HRCP23327 699 aa31.29■■■□□ 2.6
TMEM250-201ENST00000418388 PCGF6Q9BYE7 350 aa31.25■■■□□ 2.59
TMEM250-201ENST00000418388 LOC105371045A0A1W2PR82 267 aa31.03■■■□□ 2.56
TMEM250-201ENST00000418388 DCAF1Q9Y4B6 1507 aa30.99■■■□□ 2.55
TMEM250-201ENST00000418388 PPARGC1BQ86YN6 1023 aaKnown RBP30.93■■■□□ 2.54
TMEM250-201ENST00000418388 ABCC9O60706 1549 aa30.53■■■□□ 2.48
TMEM250-201ENST00000418388 SCRIBQ14160 1630 aa30.5■■■□□ 2.47
TMEM250-201ENST00000418388 RSF1Q96T23 1441 aaPredicted RBP30.37■■■□□ 2.45
TMEM250-201ENST00000418388 TRIM26Q12899 539 aaPredicted RBP30.33■■■□□ 2.45
TMEM250-201ENST00000418388 FAM9AQ8IZU1 332 aaPredicted RBP30.3■■■□□ 2.44
TMEM250-201ENST00000418388 EHMT2Q96KQ7 1210 aa30.26■■■□□ 2.43
TMEM250-201ENST00000418388 TRIM41Q8WV44 630 aa30.24■■■□□ 2.43
TMEM250-201ENST00000418388 RB1CC1Q8TDY2 1594 aa30.21■■■□□ 2.43
TMEM250-201ENST00000418388 CECR2Q9BXF3 1484 aa29.92■■■□□ 2.38
TMEM250-201ENST00000418388 MROH2BQ7Z745 1585 aa29.78■■■□□ 2.36
TMEM250-201ENST00000418388 WIZO95785 1651 aa29.67■■■□□ 2.34
TMEM250-201ENST00000418388 ZEB1P37275 1124 aaPredicted RBP29.63■■■□□ 2.33
TMEM250-201ENST00000418388 NACADO15069 1562 aa29.59■■■□□ 2.33
TMEM250-201ENST00000418388 TTBK1Q5TCY1 1321 aaPredicted RBP29.33■■■□□ 2.29
TMEM250-201ENST00000418388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.33■■■□□ 2.29
TMEM250-201ENST00000418388 BAZ1AQ9NRL2 1556 aaPredicted RBP29.32■■■□□ 2.28
TMEM250-201ENST00000418388 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
TMEM250-201ENST00000418388 ABCC8Q09428 1581 aa29.22■■■□□ 2.27
TMEM250-201ENST00000418388 SCAF1Q9H7N4 1312 aaKnown RBP29.17■■■□□ 2.26
TMEM250-201ENST00000418388 CCER1Q8TC90 406 aaPredicted RBP29.16■■■□□ 2.26
TMEM250-201ENST00000418388 CCDC88BA6NC98 1476 aa29.13■■■□□ 2.25
TMEM250-201ENST00000418388 TOP2AP11388 1531 aaKnown RBP29.02■■■□□ 2.24
TMEM250-201ENST00000418388 SOGA1O94964 1423 aa28.99■■■□□ 2.23
TMEM250-201ENST00000418388 SMARCA4P51532 1647 aa28.97■■■□□ 2.23
TMEM250-201ENST00000418388 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.23
TMEM250-201ENST00000418388 SMARCA2P51531 1590 aa28.94■■■□□ 2.22
TMEM250-201ENST00000418388 CEP162Q5TB80 1403 aa28.93■■■□□ 2.22
TMEM250-201ENST00000418388 RUSC2Q8N2Y8 1516 aa28.88■■■□□ 2.21
TMEM250-201ENST00000418388 UBTFP17480 764 aaKnown RBP28.83■■■□□ 2.21
TMEM250-201ENST00000418388 UNC13AQ9UPW8 1703 aa28.81■■■□□ 2.2
TMEM250-201ENST00000418388 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
TMEM250-201ENST00000418388 CSRNP3Q8WYN3 585 aa28.75■■■□□ 2.19
TMEM250-201ENST00000418388 NEUROD1Q13562 356 aa28.72■■■□□ 2.19
TMEM250-201ENST00000418388 DIEXFQ68CQ4 756 aaKnown RBP28.72■■■□□ 2.19
TMEM250-201ENST00000418388 TNIKQ9UKE5 1360 aa28.72■■■□□ 2.19
TMEM250-201ENST00000418388 ACIN1Q9UKV3 1341 aaKnown RBP28.65■■■□□ 2.18
TMEM250-201ENST00000418388 GOLGA3Q08378 1498 aa28.53■■■□□ 2.16
TMEM250-201ENST00000418388 EEA1Q15075 1411 aa28.52■■■□□ 2.16
TMEM250-201ENST00000418388 PELP1Q8IZL8 1130 aaKnown RBP28.51■■■□□ 2.15
TMEM250-201ENST00000418388 HNRNPUL2Q1KMD3 747 aaKnown RBP28.49■■■□□ 2.15
TMEM250-201ENST00000418388 RANGAP1P46060 587 aaPredicted RBP28.49■■■□□ 2.15
TMEM250-201ENST00000418388 GTF3C3Q9Y5Q9 886 aa28.45■■■□□ 2.15
TMEM250-201ENST00000418388 BICRAQ9NZM4 1560 aa28.43■■■□□ 2.14
TMEM250-201ENST00000418388 SYNJ1O43426 1573 aa28.42■■■□□ 2.14
TMEM250-201ENST00000418388 CENPBP07199 599 aaPredicted RBP28.36■■■□□ 2.13
TMEM250-201ENST00000418388 ZNF316A6NFI3 1004 aaPredicted RBP28.35■■■□□ 2.13
TMEM250-201ENST00000418388 YTHDC1Q96MU7 727 aaKnown RBP28.33■■■□□ 2.12
TMEM250-201ENST00000418388 CLIP1P30622 1438 aa28.3■■■□□ 2.12
TMEM250-201ENST00000418388 CEP164Q9UPV0 1460 aa28.3■■■□□ 2.12
TMEM250-201ENST00000418388 RAPGEF2Q9Y4G8 1499 aa28.22■■■□□ 2.11
TMEM250-201ENST00000418388 PEG3Q9GZU2 1588 aa28.21■■■□□ 2.11
TMEM250-201ENST00000418388 KIF21BO75037 1637 aa28.2■■■□□ 2.11
TMEM250-201ENST00000418388 ATAD2BQ9ULI0 1458 aa28.17■■■□□ 2.1
TMEM250-201ENST00000418388 VPS8Q8N3P4 1428 aa28.15■■■□□ 2.1
TMEM250-201ENST00000418388 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
TMEM250-201ENST00000418388 APLP2Q06481 763 aa28.14■■■□□ 2.1
TMEM250-201ENST00000418388 MIER1Q8N108 512 aa28.14■■■□□ 2.09
TMEM250-201ENST00000418388 TOP2BQ02880 1626 aa27.89■■■□□ 2.06
TMEM250-201ENST00000418388 KANK4Q5T7N3 995 aaPredicted RBP27.87■■■□□ 2.05
TMEM250-201ENST00000418388 ARAP1Q96P48 1450 aa27.8■■■□□ 2.04
TMEM250-201ENST00000418388 DHX57Q6P158 1386 aaKnown RBP27.75■■■□□ 2.03
TMEM250-201ENST00000418388 BIVM-ERCC5R4GMW8 1640 aa27.73■■■□□ 2.03
TMEM250-201ENST00000418388 PRXQ9BXM0 1461 aa27.73■■■□□ 2.03
TMEM250-201ENST00000418388 ITGAEP38570 1179 aa27.7■■■□□ 2.02
TMEM250-201ENST00000418388 CUX1P39880 1505 aa27.67■■■□□ 2.02
TMEM250-201ENST00000418388 ERICH3Q5RHP9 1530 aa27.66■■■□□ 2.02
TMEM250-201ENST00000418388 KIF27Q86VH2 1401 aa27.56■■■□□ 2
TMEM250-201ENST00000418388 ARHGAP35Q9NRY4 1499 aa27.5■■□□□ 1.99
TMEM250-201ENST00000418388 CLSPNQ9HAW4 1339 aa27.49■■□□□ 1.99
TMEM250-201ENST00000418388 RRBP1Q9P2E9 1410 aaKnown RBP27.49■■□□□ 1.99
TMEM250-201ENST00000418388 CCNB3Q8WWL7 1395 aa27.46■■□□□ 1.99
TMEM250-201ENST00000418388 NCAPD3P42695 1498 aa27.45■■□□□ 1.98
TMEM250-201ENST00000418388 HMGXB3Q12766 1538 aa27.42■■□□□ 1.98
TMEM250-201ENST00000418388 CFTRP13569 1480 aa27.38■■□□□ 1.97
TMEM250-201ENST00000418388 CUX2O14529 1486 aa27.35■■□□□ 1.97
TMEM250-201ENST00000418388 RAB3GAP2Q9H2M9 1393 aa27.32■■□□□ 1.96
TMEM250-201ENST00000418388 KCNH8Q96L42 1107 aa27.32■■□□□ 1.96
TMEM250-201ENST00000418388 P3H3Q8IVL6 736 aa27.3■■□□□ 1.96
TMEM250-201ENST00000418388 IGF1RP08069 1367 aa27.28■■□□□ 1.96
TMEM250-201ENST00000418388 SUPT16HQ9Y5B9 1047 aaKnown RBP27.28■■□□□ 1.96
TMEM250-201ENST00000418388 ATP1B4Q9UN42 357 aaPredicted RBP27.26■■□□□ 1.96
TMEM250-201ENST00000418388 FAM50AQ14320 339 aaKnown RBP27.23■■□□□ 1.95
TMEM250-201ENST00000418388 MAPKBP1O60336 1514 aa27.22■■□□□ 1.95
TMEM250-201ENST00000418388 SIN3AQ96ST3 1273 aa27.21■■□□□ 1.95
TMEM250-201ENST00000418388 TIAM1Q13009 1591 aa27.2■■□□□ 1.94
TMEM250-201ENST00000418388 PHLDB1Q86UU1 1377 aa27.19■■□□□ 1.94
TMEM250-201ENST00000418388 CARMIL1Q5VZK9 1371 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms