RNA–Protein interactions for RNA: ENST00000486303.1

SLC19A1-210, Transcript of solute carrier family 19 member 1, humanhuman

TSL 2

Gene SLC19A1, Length 708 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-210ENST00000486303 NISCHQ9Y2I1 1504 aa50.87■■■■■ 5.73
SLC19A1-210ENST00000486303 ABCC9O60706 1549 aa45.74■■■■■ 4.91
SLC19A1-210ENST00000486303 CCDC180Q9P1Z9 1646 aa45.71■■■■■ 4.91
SLC19A1-210ENST00000486303 RB1CC1Q8TDY2 1594 aa43.51■■■■■ 4.56
SLC19A1-210ENST00000486303 NACADO15069 1562 aa43.2■■■■■ 4.51
SLC19A1-210ENST00000486303 DNAJC5BQ9UF47 199 aa42.97■■■■■ 4.47
SLC19A1-210ENST00000486303 DCAF8L2P0C7V8 631 aa42.94■■■■■ 4.46
SLC19A1-210ENST00000486303 UNC13AQ9UPW8 1703 aa42.63■■■■■ 4.41
SLC19A1-210ENST00000486303 MYO15BQ96JP2 1530 aa42.58■■■■■ 4.41
SLC19A1-210ENST00000486303 PABPN1Q86U42 306 aaKnown RBP eCLIP42.57■■■■■ 4.41
SLC19A1-210ENST00000486303 BICRAQ9NZM4 1560 aa42.28■■■■■ 4.36
SLC19A1-210ENST00000486303 ZCCHC6Q5VYS8 1495 aaKnown RBP42.15■■■■■ 4.34
SLC19A1-210ENST00000486303 DCAF1Q9Y4B6 1507 aa42.01■■■■■ 4.32
SLC19A1-210ENST00000486303 SHROOM4Q9ULL8 1493 aa41.66■■■■■ 4.26
SLC19A1-210ENST00000486303 SCRIBQ14160 1630 aa41.64■■■■■ 4.26
SLC19A1-210ENST00000486303 CC2D2AQ9P2K1 1620 aa41.33■■■■■ 4.21
SLC19A1-210ENST00000486303 EIF4G1Q04637 1599 aaKnown RBP41.23■■■■■ 4.19
SLC19A1-210ENST00000486303 CECR2Q9BXF3 1484 aa41.2■■■■■ 4.19
SLC19A1-210ENST00000486303 NCAPD3P42695 1498 aa39.88■■■■□ 3.97
SLC19A1-210ENST00000486303 ATAD2BQ9ULI0 1458 aa39.75■■■■□ 3.95
SLC19A1-210ENST00000486303 SMARCA4P51532 1647 aa39.72■■■■□ 3.95
SLC19A1-210ENST00000486303 SMARCA2P51531 1590 aa39.63■■■■□ 3.94
SLC19A1-210ENST00000486303 HMGXB3Q12766 1538 aa39.58■■■■□ 3.93
SLC19A1-210ENST00000486303 DNAJC5Q9H3Z4 198 aa39.49■■■■□ 3.91
SLC19A1-210ENST00000486303 BAZ1AQ9NRL2 1556 aaPredicted RBP39.49■■■■□ 3.91
SLC19A1-210ENST00000486303 ERCC6Q03468 1493 aa39.48■■■■□ 3.91
SLC19A1-210ENST00000486303 CUX2O14529 1486 aa39.43■■■■□ 3.9
SLC19A1-210ENST00000486303 BAZ1BQ9UIG0 1483 aaKnown RBP39.36■■■■□ 3.89
SLC19A1-210ENST00000486303 PEG3Q9GZU2 1588 aa39.33■■■■□ 3.89
SLC19A1-210ENST00000486303 NESP48681 1621 aa39.29■■■■□ 3.88
SLC19A1-210ENST00000486303 MROH2BQ7Z745 1585 aa39.21■■■■□ 3.87
SLC19A1-210ENST00000486303 LAMC3Q9Y6N6 1575 aa39■■■■□ 3.83
SLC19A1-210ENST00000486303 THOC2Q8NI27 1593 aaKnown RBP38.91■■■■□ 3.82
SLC19A1-210ENST00000486303 KIF21AQ7Z4S6 1674 aa38.82■■■■□ 3.81
SLC19A1-210ENST00000486303 WIZO95785 1651 aa38.77■■■■□ 3.8
SLC19A1-210ENST00000486303 PDS5BQ9NTI5 1447 aa38.75■■■■□ 3.79
SLC19A1-210ENST00000486303 CADPSQ9ULU8 1353 aa38.65■■■■□ 3.78
SLC19A1-210ENST00000486303 MRC2Q9UBG0 1479 aa38.43■■■■□ 3.74
SLC19A1-210ENST00000486303 RSF1Q96T23 1441 aaPredicted RBP38.36■■■■□ 3.73
SLC19A1-210ENST00000486303 WDR62O43379 1518 aa38.35■■■■□ 3.73
SLC19A1-210ENST00000486303 CEP164Q9UPV0 1460 aa38.27■■■■□ 3.72
SLC19A1-210ENST00000486303 TOP2AP11388 1531 aaKnown RBP38.24■■■■□ 3.71
SLC19A1-210ENST00000486303 FANCD2Q9BXW9 1451 aa38.22■■■■□ 3.71
SLC19A1-210ENST00000486303 CFTRP13569 1480 aa38.21■■■■□ 3.71
SLC19A1-210ENST00000486303 URB2Q14146 1524 aaKnown RBP37.93■■■■□ 3.66
SLC19A1-210ENST00000486303 PRDM2Q13029 1718 aa37.9■■■■□ 3.66
SLC19A1-210ENST00000486303 CCDC88BA6NC98 1476 aa37.81■■■■□ 3.64
SLC19A1-210ENST00000486303 TRIM41Q8WV44 630 aa37.72■■■■□ 3.63
SLC19A1-210ENST00000486303 OSCARQ8IYS5 282 aa37.61■■■■□ 3.61
SLC19A1-210ENST00000486303 TOPBP1Q92547 1522 aa37.51■■■■□ 3.59
SLC19A1-210ENST00000486303 IFT140Q96RY7 1462 aa37.5■■■■□ 3.59
SLC19A1-210ENST00000486303 ZNF608Q9ULD9 1512 aaPredicted RBP37.47■■■■□ 3.59
SLC19A1-210ENST00000486303 ABCC8Q09428 1581 aa37.4■■■■□ 3.58
SLC19A1-210ENST00000486303 DNMBPQ6XZF7 1577 aa37.37■■■■□ 3.57
SLC19A1-210ENST00000486303 EIF4G3O43432 1585 aaKnown RBP37.27■■■■□ 3.56
SLC19A1-210ENST00000486303 TARBP1Q13395 1621 aaKnown RBP37.2■■■■□ 3.55
SLC19A1-210ENST00000486303 RIMBP3CA6NJZ7 1639 aa37.18■■■■□ 3.54
SLC19A1-210ENST00000486303 RIMBP3BA6NNM3 1639 aa37.18■■■■□ 3.54
SLC19A1-210ENST00000486303 RIMBP3Q9UFD9 1639 aa37.18■■■■□ 3.54
SLC19A1-210ENST00000486303 AQRO60306 1485 aaKnown RBP eCLIP37.12■■■■□ 3.537e-6■□□□□ 9.9
SLC19A1-210ENST00000486303 POLA1P09884 1462 aaPredicted RBP37.11■■■■□ 3.53
SLC19A1-210ENST00000486303 CHD1O14646 1710 aa37.05■■■■□ 3.52
SLC19A1-210ENST00000486303 ARHGEF11O15085 1522 aa37.03■■■■□ 3.52
SLC19A1-210ENST00000486303 RAD54L2Q9Y4B4 1467 aa36.98■■■■□ 3.51
SLC19A1-210ENST00000486303 SOGA1O94964 1423 aa36.93■■■■□ 3.5
SLC19A1-210ENST00000486303 FGD5Q6ZNL6 1462 aa36.88■■■■□ 3.49
SLC19A1-210ENST00000486303 TDRD9Q8NDG6 1382 aaKnown RBP36.87■■■■□ 3.49
SLC19A1-210ENST00000486303 FBLN2P98095 1184 aa36.86■■■■□ 3.49
SLC19A1-210ENST00000486303 CUX1P39880 1505 aa36.85■■■■□ 3.49
SLC19A1-210ENST00000486303 WDR97A6NE52 1622 aa36.79■■■■□ 3.48
SLC19A1-210ENST00000486303 CYB5RLQ6IPT4 315 aa36.75■■■■□ 3.47
SLC19A1-210ENST00000486303 SNAPC4Q5SXM2 1469 aa36.74■■■■□ 3.47
SLC19A1-210ENST00000486303 ARAP1Q96P48 1450 aa36.67■■■■□ 3.46
SLC19A1-210ENST00000486303 MAGI1Q96QZ7 1491 aaPredicted RBP36.63■■■■□ 3.45
SLC19A1-210ENST00000486303 GRIN2BQ13224 1484 aa36.62■■■■□ 3.45
SLC19A1-210ENST00000486303 SUPT5HO00267 1087 aaKnown RBP36.6■■■■□ 3.45
SLC19A1-210ENST00000486303 CHMP7Q8WUX9 453 aaPredicted RBP36.58■■■■□ 3.45
SLC19A1-210ENST00000486303 CLASP1Q7Z460 1538 aa36.58■■■■□ 3.45
SLC19A1-210ENST00000486303 SYNJ1O43426 1573 aa36.54■■■■□ 3.44
SLC19A1-210ENST00000486303 PBRM1Q86U86 1689 aa36.53■■■■□ 3.44
SLC19A1-210ENST00000486303 SYNJ2O15056 1496 aa36.51■■■■□ 3.44
SLC19A1-210ENST00000486303 GAPVD1Q14C86 1478 aa36.49■■■■□ 3.43
SLC19A1-210ENST00000486303 ABCA10Q8WWZ4 1543 aa36.44■■■■□ 3.42
SLC19A1-210ENST00000486303 ABCA5Q8WWZ7 1642 aa36.42■■■■□ 3.42
SLC19A1-210ENST00000486303 TRHP20396 242 aaPredicted RBP36.35■■■■□ 3.41
SLC19A1-210ENST00000486303 WRNQ14191 1432 aaPredicted RBP eCLIP36.27■■■■□ 3.4
SLC19A1-210ENST00000486303 BIVM-ERCC5R4GMW8 1640 aa36.26■■■■□ 3.39
SLC19A1-210ENST00000486303 TOP2BQ02880 1626 aa36.24■■■■□ 3.39
SLC19A1-210ENST00000486303 GRIN2AQ12879 1464 aa36.16■■■■□ 3.38
SLC19A1-210ENST00000486303 ADAMTS12P58397 1594 aa36.15■■■■□ 3.38
SLC19A1-210ENST00000486303 CEP170Q5SW79 1584 aa36.06■■■■□ 3.36
SLC19A1-210ENST00000486303 NUP160Q12769 1436 aa36.04■■■■□ 3.36
SLC19A1-210ENST00000486303 ERCC6L2Q5T890 1561 aa36.02■■■■□ 3.36
SLC19A1-210ENST00000486303 FHAD1B1AJZ9 1412 aa36.01■■■■□ 3.36
SLC19A1-210ENST00000486303 ERICH3Q5RHP9 1530 aa35.99■■■■□ 3.35
SLC19A1-210ENST00000486303 SHROOM2Q13796 1616 aa35.92■■■■□ 3.34
SLC19A1-210ENST00000486303 PRG4Q92954 1404 aaPredicted RBP35.69■■■■□ 3.3
SLC19A1-210ENST00000486303 JPH4Q96JJ6 628 aa35.66■■■■□ 3.3
SLC19A1-210ENST00000486303 RUSC2Q8N2Y8 1516 aa35.64■■■■□ 3.3
SLC19A1-210ENST00000486303 IGF1RP08069 1367 aa35.51■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms