RNA–Protein interactions for RNA: ENST00000332440.3

LINC00313-201, long intergenic non-protein coding RNA 313, humanhuman

TSL 1 (best) BASIC

Gene LINC00313, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00313-201ENST00000332440 NISCHQ9Y2I1 1504 aa41.08■■■■■ 4.17
LINC00313-201ENST00000332440 CCDC180Q9P1Z9 1646 aa36.84■■■■□ 3.49
LINC00313-201ENST00000332440 ABCC9O60706 1549 aa36.48■■■■□ 3.43
LINC00313-201ENST00000332440 RB1CC1Q8TDY2 1594 aa34.85■■■■□ 3.17
LINC00313-201ENST00000332440 NACADO15069 1562 aa34.7■■■■□ 3.14
LINC00313-201ENST00000332440 MYO15BQ96JP2 1530 aa34.38■■■■□ 3.09
LINC00313-201ENST00000332440 UNC13AQ9UPW8 1703 aa34.22■■■■□ 3.07
LINC00313-201ENST00000332440 DCAF8L2P0C7V8 631 aa34.17■■■■□ 3.06
LINC00313-201ENST00000332440 ZCCHC6Q5VYS8 1495 aaKnown RBP34.14■■■■□ 3.06
LINC00313-201ENST00000332440 DNAJC5BQ9UF47 199 aa34.09■■■■□ 3.05
LINC00313-201ENST00000332440 DCAF1Q9Y4B6 1507 aa34.01■■■■□ 3.04
LINC00313-201ENST00000332440 BICRAQ9NZM4 1560 aa33.99■■■■□ 3.03
LINC00313-201ENST00000332440 PABPN1Q86U42 306 aaKnown RBP eCLIP33.9■■■■□ 3.02
LINC00313-201ENST00000332440 SHROOM4Q9ULL8 1493 aa33.49■■■□□ 2.95
LINC00313-201ENST00000332440 SCRIBQ14160 1630 aa33.48■■■□□ 2.95
LINC00313-201ENST00000332440 CC2D2AQ9P2K1 1620 aa33.05■■■□□ 2.88
LINC00313-201ENST00000332440 EIF4G1Q04637 1599 aaKnown RBP33.04■■■□□ 2.88
LINC00313-201ENST00000332440 CECR2Q9BXF3 1484 aa32.85■■■□□ 2.85
LINC00313-201ENST00000332440 NCAPD3P42695 1498 aa32.04■■■□□ 2.72
LINC00313-201ENST00000332440 SMARCA4P51532 1647 aa32.02■■■□□ 2.72
LINC00313-201ENST00000332440 ATAD2BQ9ULI0 1458 aa31.97■■■□□ 2.71
LINC00313-201ENST00000332440 HMGXB3Q12766 1538 aa31.86■■■□□ 2.69
LINC00313-201ENST00000332440 SMARCA2P51531 1590 aa31.85■■■□□ 2.69
LINC00313-201ENST00000332440 BAZ1AQ9NRL2 1556 aaPredicted RBP31.84■■■□□ 2.69
LINC00313-201ENST00000332440 PEG3Q9GZU2 1588 aa31.79■■■□□ 2.68
LINC00313-201ENST00000332440 MROH2BQ7Z745 1585 aa31.67■■■□□ 2.66
LINC00313-201ENST00000332440 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
LINC00313-201ENST00000332440 NESP48681 1621 aa31.46■■■□□ 2.63
LINC00313-201ENST00000332440 CUX2O14529 1486 aa31.4■■■□□ 2.62
LINC00313-201ENST00000332440 ERCC6Q03468 1493 aa31.38■■■□□ 2.61
LINC00313-201ENST00000332440 WIZO95785 1651 aa31.29■■■□□ 2.6
LINC00313-201ENST00000332440 LAMC3Q9Y6N6 1575 aa31.27■■■□□ 2.6
LINC00313-201ENST00000332440 THOC2Q8NI27 1593 aaKnown RBP31.21■■■□□ 2.59
LINC00313-201ENST00000332440 KIF21AQ7Z4S6 1674 aa31.11■■■□□ 2.57
LINC00313-201ENST00000332440 DNAJC5Q9H3Z4 198 aa31.06■■■□□ 2.56
LINC00313-201ENST00000332440 RSF1Q96T23 1441 aaPredicted RBP31.06■■■□□ 2.56
LINC00313-201ENST00000332440 CADPSQ9ULU8 1353 aa31.01■■■□□ 2.55
LINC00313-201ENST00000332440 PDS5BQ9NTI5 1447 aa30.98■■■□□ 2.55
LINC00313-201ENST00000332440 TOP2AP11388 1531 aaKnown RBP30.92■■■□□ 2.54
LINC00313-201ENST00000332440 WDR62O43379 1518 aa30.78■■■□□ 2.52
LINC00313-201ENST00000332440 MRC2Q9UBG0 1479 aa30.78■■■□□ 2.52
LINC00313-201ENST00000332440 CFTRP13569 1480 aa30.77■■■□□ 2.52
LINC00313-201ENST00000332440 FANCD2Q9BXW9 1451 aa30.66■■■□□ 2.5
LINC00313-201ENST00000332440 CEP164Q9UPV0 1460 aa30.66■■■□□ 2.5
LINC00313-201ENST00000332440 PRDM2Q13029 1718 aa30.55■■■□□ 2.48
LINC00313-201ENST00000332440 CCDC88BA6NC98 1476 aa30.52■■■□□ 2.48
LINC00313-201ENST00000332440 URB2Q14146 1524 aaKnown RBP30.48■■■□□ 2.47
LINC00313-201ENST00000332440 TOPBP1Q92547 1522 aa30.15■■■□□ 2.42
LINC00313-201ENST00000332440 DNMBPQ6XZF7 1577 aa30.07■■■□□ 2.4
LINC00313-201ENST00000332440 IFT140Q96RY7 1462 aa30.06■■■□□ 2.4
LINC00313-201ENST00000332440 ZNF608Q9ULD9 1512 aaPredicted RBP30.05■■■□□ 2.4
LINC00313-201ENST00000332440 ABCC8Q09428 1581 aa30.01■■■□□ 2.39
LINC00313-201ENST00000332440 TARBP1Q13395 1621 aaKnown RBP29.96■■■□□ 2.39
LINC00313-201ENST00000332440 EIF4G3O43432 1585 aaKnown RBP29.93■■■□□ 2.38
LINC00313-201ENST00000332440 POLA1P09884 1462 aaPredicted RBP29.87■■■□□ 2.37
LINC00313-201ENST00000332440 OSCARQ8IYS5 282 aa29.81■■■□□ 2.36
LINC00313-201ENST00000332440 CUX1P39880 1505 aa29.75■■■□□ 2.35
LINC00313-201ENST00000332440 AQRO60306 1485 aaKnown RBP eCLIP29.73■■■□□ 2.35
LINC00313-201ENST00000332440 RAD54L2Q9Y4B4 1467 aa29.71■■■□□ 2.35
LINC00313-201ENST00000332440 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
LINC00313-201ENST00000332440 CHD1O14646 1710 aa29.65■■■□□ 2.34
LINC00313-201ENST00000332440 WDR97A6NE52 1622 aa29.63■■■□□ 2.33
LINC00313-201ENST00000332440 TRIM41Q8WV44 630 aa29.62■■■□□ 2.33
LINC00313-201ENST00000332440 RIMBP3CA6NJZ7 1639 aa29.62■■■□□ 2.33
LINC00313-201ENST00000332440 RIMBP3BA6NNM3 1639 aa29.62■■■□□ 2.33
LINC00313-201ENST00000332440 RIMBP3Q9UFD9 1639 aa29.62■■■□□ 2.33
LINC00313-201ENST00000332440 SOGA1O94964 1423 aa29.62■■■□□ 2.33
LINC00313-201ENST00000332440 SUPT5HO00267 1087 aaKnown RBP29.55■■■□□ 2.32
LINC00313-201ENST00000332440 TDRD9Q8NDG6 1382 aaKnown RBP29.54■■■□□ 2.32
LINC00313-201ENST00000332440 ARHGEF11O15085 1522 aa29.53■■■□□ 2.32
LINC00313-201ENST00000332440 SNAPC4Q5SXM2 1469 aa29.46■■■□□ 2.31
LINC00313-201ENST00000332440 ABCA5Q8WWZ7 1642 aa29.4■■■□□ 2.3
LINC00313-201ENST00000332440 MAGI1Q96QZ7 1491 aaPredicted RBP29.4■■■□□ 2.3
LINC00313-201ENST00000332440 ABCA10Q8WWZ4 1543 aa29.4■■■□□ 2.3
LINC00313-201ENST00000332440 GRIN2BQ13224 1484 aa29.38■■■□□ 2.29
LINC00313-201ENST00000332440 PBRM1Q86U86 1689 aa29.37■■■□□ 2.29
LINC00313-201ENST00000332440 CLASP1Q7Z460 1538 aa29.37■■■□□ 2.29
LINC00313-201ENST00000332440 BIVM-ERCC5R4GMW8 1640 aa29.36■■■□□ 2.29
LINC00313-201ENST00000332440 TOP2BQ02880 1626 aa29.32■■■□□ 2.28
LINC00313-201ENST00000332440 SYNJ1O43426 1573 aa29.31■■■□□ 2.28
LINC00313-201ENST00000332440 GAPVD1Q14C86 1478 aa29.3■■■□□ 2.28
LINC00313-201ENST00000332440 SYNJ2O15056 1496 aa29.29■■■□□ 2.28
LINC00313-201ENST00000332440 ARAP1Q96P48 1450 aa29.29■■■□□ 2.28
LINC00313-201ENST00000332440 FBLN2P98095 1184 aa29.26■■■□□ 2.27
LINC00313-201ENST00000332440 WRNQ14191 1432 aaPredicted RBP eCLIP29.22■■■□□ 2.27
LINC00313-201ENST00000332440 ADAMTS12P58397 1594 aa29.13■■■□□ 2.25
LINC00313-201ENST00000332440 CHMP7Q8WUX9 453 aaPredicted RBP29.13■■■□□ 2.25
LINC00313-201ENST00000332440 CYB5RLQ6IPT4 315 aa29.09■■■□□ 2.25
LINC00313-201ENST00000332440 GRIN2AQ12879 1464 aa29.05■■■□□ 2.24
LINC00313-201ENST00000332440 ERICH3Q5RHP9 1530 aa29.01■■■□□ 2.23
LINC00313-201ENST00000332440 CEP170Q5SW79 1584 aa29■■■□□ 2.23
LINC00313-201ENST00000332440 NUP160Q12769 1436 aa28.99■■■□□ 2.23
LINC00313-201ENST00000332440 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
LINC00313-201ENST00000332440 ERCC6L2Q5T890 1561 aa28.92■■■□□ 2.22
LINC00313-201ENST00000332440 SHROOM2Q13796 1616 aa28.91■■■□□ 2.22
LINC00313-201ENST00000332440 RUSC2Q8N2Y8 1516 aa28.74■■■□□ 2.19
LINC00313-201ENST00000332440 IGF1RP08069 1367 aa28.64■■■□□ 2.18
LINC00313-201ENST00000332440 CUL7Q14999 1698 aa28.63■■■□□ 2.17
LINC00313-201ENST00000332440 KIF27Q86VH2 1401 aa28.6■■■□□ 2.17
LINC00313-201ENST00000332440 TRHP20396 242 aaPredicted RBP28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms