RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 NISCHQ9Y2I1 1504 aa26.76■■□□□ 1.87
ATP2C1-214ENST00000508532 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.57
ATP2C1-214ENST00000508532 SHROOM4Q9ULL8 1493 aa24.82■■□□□ 1.56
ATP2C1-214ENST00000508532 DCAF8L2P0C7V8 631 aa24.52■■□□□ 1.52
ATP2C1-214ENST00000508532 PCGF6Q9BYE7 350 aa24.11■■□□□ 1.45
ATP2C1-214ENST00000508532 HRCP23327 699 aa23.84■■□□□ 1.41
ATP2C1-214ENST00000508532 PPARGC1BQ86YN6 1023 aaKnown RBP23.6■■□□□ 1.37
ATP2C1-214ENST00000508532 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
ATP2C1-214ENST00000508532 EHMT2Q96KQ7 1210 aa23.49■■□□□ 1.35
ATP2C1-214ENST00000508532 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
ATP2C1-214ENST00000508532 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
ATP2C1-214ENST00000508532 TRIM26Q12899 539 aaPredicted RBP23.08■■□□□ 1.29
ATP2C1-214ENST00000508532 ZEB1P37275 1124 aaPredicted RBP22.98■■□□□ 1.27
ATP2C1-214ENST00000508532 MYO15BQ96JP2 1530 aa22.93■■□□□ 1.26
ATP2C1-214ENST00000508532 PELP1Q8IZL8 1130 aaKnown RBP22.92■■□□□ 1.26
ATP2C1-214ENST00000508532 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
ATP2C1-214ENST00000508532 TTBK1Q5TCY1 1321 aaPredicted RBP22.8■■□□□ 1.24
ATP2C1-214ENST00000508532 CCER1Q8TC90 406 aaPredicted RBP22.69■■□□□ 1.22
ATP2C1-214ENST00000508532 CENPBP07199 599 aaPredicted RBP22.53■■□□□ 1.2
ATP2C1-214ENST00000508532 ZCCHC6Q5VYS8 1495 aaKnown RBP22.51■■□□□ 1.19
ATP2C1-214ENST00000508532 DCAF1Q9Y4B6 1507 aa22.49■■□□□ 1.19
ATP2C1-214ENST00000508532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.41■■□□□ 1.18
ATP2C1-214ENST00000508532 YTHDC1Q96MU7 727 aaKnown RBP22.37■■□□□ 1.17
ATP2C1-214ENST00000508532 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
ATP2C1-214ENST00000508532 DIEXFQ68CQ4 756 aaKnown RBP22.2■■□□□ 1.14
ATP2C1-214ENST00000508532 GTF3C3Q9Y5Q9 886 aa22.18■■□□□ 1.14
ATP2C1-214ENST00000508532 ACIN1Q9UKV3 1341 aaKnown RBP22.11■■□□□ 1.13
ATP2C1-214ENST00000508532 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.12
ATP2C1-214ENST00000508532 MYT1Q01538 1121 aa22.04■■□□□ 1.12
ATP2C1-214ENST00000508532 CCDC180Q9P1Z9 1646 aa22.03■■□□□ 1.12
ATP2C1-214ENST00000508532 RANGAP1P46060 587 aaPredicted RBP22.03■■□□□ 1.12
ATP2C1-214ENST00000508532 APLP2Q06481 763 aa22.02■■□□□ 1.12
ATP2C1-214ENST00000508532 NEUROD1Q13562 356 aa22.02■■□□□ 1.12
ATP2C1-214ENST00000508532 HNRNPUL2Q1KMD3 747 aaKnown RBP21.88■■□□□ 1.09
ATP2C1-214ENST00000508532 ZNF316A6NFI3 1004 aaPredicted RBP21.7■■□□□ 1.06
ATP2C1-214ENST00000508532 RSF1Q96T23 1441 aaPredicted RBP21.63■■□□□ 1.05
ATP2C1-214ENST00000508532 SCRIBQ14160 1630 aa21.59■■□□□ 1.05
ATP2C1-214ENST00000508532 MIER1Q8N108 512 aa21.44■■□□□ 1.02
ATP2C1-214ENST00000508532 ITGAEP38570 1179 aa21.42■■□□□ 1.02
ATP2C1-214ENST00000508532 ABCC9O60706 1549 aa21.4■■□□□ 1.02
ATP2C1-214ENST00000508532 CSRNP3Q8WYN3 585 aa21.36■■□□□ 1.01
ATP2C1-214ENST00000508532 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
ATP2C1-214ENST00000508532 NEFLP07196 543 aa21.28■■□□□ 1
ATP2C1-214ENST00000508532 BCANQ96GW7 911 aa21.28■■□□□ 1
ATP2C1-214ENST00000508532 ATP1B4Q9UN42 357 aaPredicted RBP21.22■□□□□ 0.99
ATP2C1-214ENST00000508532 CEP162Q5TB80 1403 aa21.19■□□□□ 0.98
ATP2C1-214ENST00000508532 ERICH6Q7L0X2 663 aa21.16■□□□□ 0.98
ATP2C1-214ENST00000508532 CECR2Q9BXF3 1484 aa21.15■□□□□ 0.98
ATP2C1-214ENST00000508532 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
ATP2C1-214ENST00000508532 TNIKQ9UKE5 1360 aa20.96■□□□□ 0.95
ATP2C1-214ENST00000508532 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
ATP2C1-214ENST00000508532 SOGA1O94964 1423 aa20.95■□□□□ 0.94
ATP2C1-214ENST00000508532 FKBP8Q14318 412 aa20.9■□□□□ 0.94
ATP2C1-214ENST00000508532 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
ATP2C1-214ENST00000508532 SUPT16HQ9Y5B9 1047 aaKnown RBP20.88■□□□□ 0.93
ATP2C1-214ENST00000508532 CLIP1P30622 1438 aa20.87■□□□□ 0.93
ATP2C1-214ENST00000508532 ABCC8Q09428 1581 aa20.86■□□□□ 0.93
ATP2C1-214ENST00000508532 CLSPNQ9HAW4 1339 aa20.86■□□□□ 0.93
ATP2C1-214ENST00000508532 FAM50AQ14320 339 aaKnown RBP20.85■□□□□ 0.93
ATP2C1-214ENST00000508532 DDX10Q13206 875 aaKnown RBP20.82■□□□□ 0.92
ATP2C1-214ENST00000508532 GOLGA3Q08378 1498 aa20.82■□□□□ 0.92
ATP2C1-214ENST00000508532 WIZO95785 1651 aa20.78■□□□□ 0.92
ATP2C1-214ENST00000508532 EEA1Q15075 1411 aa20.75■□□□□ 0.91
ATP2C1-214ENST00000508532 TRIM52Q96A61 297 aa20.74■□□□□ 0.91
ATP2C1-214ENST00000508532 ANP32CO43423 234 aa20.74■□□□□ 0.91
ATP2C1-214ENST00000508532 WRNQ14191 1432 aaPredicted RBP eCLIP20.72■□□□□ 0.91
ATP2C1-214ENST00000508532 ANP32EQ9BTT0 268 aa20.72■□□□□ 0.91
ATP2C1-214ENST00000508532 HIRIP3Q9BW71 556 aaPredicted RBP20.71■□□□□ 0.91
ATP2C1-214ENST00000508532 CNGB1Q14028 1251 aaPredicted RBP20.7■□□□□ 0.9
ATP2C1-214ENST00000508532 NACADO15069 1562 aa20.67■□□□□ 0.9
ATP2C1-214ENST00000508532 RUSC2Q8N2Y8 1516 aa20.65■□□□□ 0.9
ATP2C1-214ENST00000508532 TSHZ2Q9NRE2 1034 aa20.62■□□□□ 0.89
ATP2C1-214ENST00000508532 BAZ1AQ9NRL2 1556 aaPredicted RBP20.61■□□□□ 0.89
ATP2C1-214ENST00000508532 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
ATP2C1-214ENST00000508532 P3H3Q8IVL6 736 aa20.59■□□□□ 0.89
ATP2C1-214ENST00000508532 CDK11AQ9UQ88 783 aaPredicted RBP20.58■□□□□ 0.89
ATP2C1-214ENST00000508532 POLR3GLQ9BT43 218 aa20.54■□□□□ 0.88
ATP2C1-214ENST00000508532 KCNH8Q96L42 1107 aa20.53■□□□□ 0.88
ATP2C1-214ENST00000508532 IRX6P78412 446 aaPredicted RBP20.53■□□□□ 0.88
ATP2C1-214ENST00000508532 VPS8Q8N3P4 1428 aa20.53■□□□□ 0.88
ATP2C1-214ENST00000508532 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
ATP2C1-214ENST00000508532 HNRNPUQ00839 825 aaKnown RBP eCLIP20.49■□□□□ 0.87
ATP2C1-214ENST00000508532 SIN3AQ96ST3 1273 aa20.47■□□□□ 0.87
ATP2C1-214ENST00000508532 BCL11AQ9H165 835 aa20.44■□□□□ 0.86
ATP2C1-214ENST00000508532 DHX57Q6P158 1386 aaKnown RBP20.39■□□□□ 0.85
ATP2C1-214ENST00000508532 RBM19Q9Y4C8 960 aaKnown RBP20.38■□□□□ 0.85
ATP2C1-214ENST00000508532 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
ATP2C1-214ENST00000508532 TONSLQ96HA7 1378 aa20.36■□□□□ 0.85
ATP2C1-214ENST00000508532 CCNB3Q8WWL7 1395 aa20.32■□□□□ 0.84
ATP2C1-214ENST00000508532 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
ATP2C1-214ENST00000508532 FAM9BQ8IZU0 186 aa20.29■□□□□ 0.84
ATP2C1-214ENST00000508532 RTL5Q5HYW3 569 aaPredicted RBP20.28■□□□□ 0.84
ATP2C1-214ENST00000508532 NBR1Q14596 966 aa20.22■□□□□ 0.83
ATP2C1-214ENST00000508532 RAB3GAP2Q9H2M9 1393 aa20.21■□□□□ 0.83
ATP2C1-214ENST00000508532 SMARCA2P51531 1590 aa20.21■□□□□ 0.83
ATP2C1-214ENST00000508532 ZNF326Q5BKZ1 582 aaKnown RBP20.17■□□□□ 0.82
ATP2C1-214ENST00000508532 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.82
ATP2C1-214ENST00000508532 SMARCA4P51532 1647 aa20.14■□□□□ 0.82
ATP2C1-214ENST00000508532 ARID3CA6NKF2 412 aa20.14■□□□□ 0.81
ATP2C1-214ENST00000508532 CHIC2Q9UKJ5 165 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms