RNA–Protein interactions for RNA: ENST00000557985.2

TMEM250-204, Transcript of transmembrane protein 250, humanhuman

TSL 1 (best)

Gene TMEM250, Length 1,981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM250-204ENST00000557985 NISCHQ9Y2I1 1504 aa49.29■■■■■ 5.48
TMEM250-204ENST00000557985 CCDC180Q9P1Z9 1646 aa43.06■■■■■ 4.48
TMEM250-204ENST00000557985 ABCC9O60706 1549 aa41.3■■■■■ 4.2
TMEM250-204ENST00000557985 ZCCHC6Q5VYS8 1495 aaKnown RBP41.27■■■■■ 4.2
TMEM250-204ENST00000557985 DCAF8L2P0C7V8 631 aa41.14■■■■■ 4.18
TMEM250-204ENST00000557985 DCAF1Q9Y4B6 1507 aa40.64■■■■■ 4.1
TMEM250-204ENST00000557985 MYO15BQ96JP2 1530 aa40.29■■■■■ 4.04
TMEM250-204ENST00000557985 NACADO15069 1562 aa40.25■■■■■ 4.03
TMEM250-204ENST00000557985 SHROOM4Q9ULL8 1493 aa40.14■■■■■ 4.02
TMEM250-204ENST00000557985 RB1CC1Q8TDY2 1594 aa40.02■■■■■ 4
TMEM250-204ENST00000557985 SCRIBQ14160 1630 aa39.7■■■■□ 3.95
TMEM250-204ENST00000557985 UNC13AQ9UPW8 1703 aa39.26■■■■□ 3.88
TMEM250-204ENST00000557985 PABPN1Q86U42 306 aaKnown RBP eCLIP38.97■■■■□ 3.83
TMEM250-204ENST00000557985 BICRAQ9NZM4 1560 aa38.86■■■■□ 3.81
TMEM250-204ENST00000557985 SUPT5HO00267 1087 aaKnown RBP38.45■■■■□ 3.75
TMEM250-204ENST00000557985 CECR2Q9BXF3 1484 aa38.43■■■■□ 3.74
TMEM250-204ENST00000557985 RSF1Q96T23 1441 aaPredicted RBP38.13■■■■□ 3.69
TMEM250-204ENST00000557985 MROH2BQ7Z745 1585 aa38.12■■■■□ 3.69
TMEM250-204ENST00000557985 BAZ1AQ9NRL2 1556 aaPredicted RBP38.06■■■■□ 3.68
TMEM250-204ENST00000557985 SMARCA4P51532 1647 aa37.96■■■■□ 3.67
TMEM250-204ENST00000557985 WIZO95785 1651 aa37.8■■■■□ 3.64
TMEM250-204ENST00000557985 EIF4G1Q04637 1599 aaKnown RBP37.72■■■■□ 3.63
TMEM250-204ENST00000557985 ATAD2BQ9ULI0 1458 aa37.47■■■■□ 3.59
TMEM250-204ENST00000557985 PEG3Q9GZU2 1588 aa37.44■■■■□ 3.58
TMEM250-204ENST00000557985 SMARCA2P51531 1590 aa37.38■■■■□ 3.57
TMEM250-204ENST00000557985 CC2D2AQ9P2K1 1620 aa37.3■■■■□ 3.56
TMEM250-204ENST00000557985 TOP2AP11388 1531 aaKnown RBP37.3■■■■□ 3.56
TMEM250-204ENST00000557985 BAZ1BQ9UIG0 1483 aaKnown RBP37.23■■■■□ 3.55
TMEM250-204ENST00000557985 NCAPD3P42695 1498 aa37.19■■■■□ 3.54
TMEM250-204ENST00000557985 HMGXB3Q12766 1538 aa37.03■■■■□ 3.52
TMEM250-204ENST00000557985 CCDC88BA6NC98 1476 aa37.01■■■■□ 3.52
TMEM250-204ENST00000557985 DNAJC5BQ9UF47 199 aa36.9■■■■□ 3.5
TMEM250-204ENST00000557985 CHIC1Q5VXU3 224 aa36.51■■■■□ 3.44
TMEM250-204ENST00000557985 CFTRP13569 1480 aa36.26■■■■□ 3.39
TMEM250-204ENST00000557985 CADPSQ9ULU8 1353 aa36.25■■■■□ 3.39
TMEM250-204ENST00000557985 NESP48681 1621 aa36.14■■■■□ 3.38
TMEM250-204ENST00000557985 ABCC8Q09428 1581 aa36.12■■■■□ 3.37
TMEM250-204ENST00000557985 TRIM41Q8WV44 630 aa36.11■■■■□ 3.37
TMEM250-204ENST00000557985 PRDM2Q13029 1718 aa35.98■■■■□ 3.35
TMEM250-204ENST00000557985 LAMC3Q9Y6N6 1575 aa35.96■■■■□ 3.35
TMEM250-204ENST00000557985 WRNQ14191 1432 aaPredicted RBP eCLIP35.89■■■■□ 3.34
TMEM250-204ENST00000557985 FANCD2Q9BXW9 1451 aa35.85■■■■□ 3.33
TMEM250-204ENST00000557985 SYNJ1O43426 1573 aa35.76■■■■□ 3.31
TMEM250-204ENST00000557985 PDS5BQ9NTI5 1447 aa35.75■■■■□ 3.31
TMEM250-204ENST00000557985 CUX1P39880 1505 aa35.64■■■■□ 3.3
TMEM250-204ENST00000557985 CEP164Q9UPV0 1460 aa35.64■■■■□ 3.3
TMEM250-204ENST00000557985 KIF21AQ7Z4S6 1674 aa35.63■■■■□ 3.29
TMEM250-204ENST00000557985 TOP2BQ02880 1626 aa35.59■■■■□ 3.29
TMEM250-204ENST00000557985 FAM9AQ8IZU1 332 aaPredicted RBP35.55■■■■□ 3.28
TMEM250-204ENST00000557985 BIVM-ERCC5R4GMW8 1640 aa35.54■■■■□ 3.28
TMEM250-204ENST00000557985 URB2Q14146 1524 aaKnown RBP35.43■■■■□ 3.26
TMEM250-204ENST00000557985 ERCC6Q03468 1493 aa35.41■■■■□ 3.26
TMEM250-204ENST00000557985 TOPBP1Q92547 1522 aa35.41■■■■□ 3.26
TMEM250-204ENST00000557985 DNMBPQ6XZF7 1577 aa35.4■■■■□ 3.26
TMEM250-204ENST00000557985 SOGA1O94964 1423 aa35.38■■■■□ 3.26
TMEM250-204ENST00000557985 FGD5Q6ZNL6 1462 aa35.32■■■■□ 3.25
TMEM250-204ENST00000557985 RUSC2Q8N2Y8 1516 aa35.3■■■■□ 3.24
TMEM250-204ENST00000557985 MRC2Q9UBG0 1479 aa35.29■■■■□ 3.24
TMEM250-204ENST00000557985 LOC105371045A0A1W2PR82 267 aa35.22■■■■□ 3.23
TMEM250-204ENST00000557985 POLA1P09884 1462 aaPredicted RBP35.21■■■■□ 3.23
TMEM250-204ENST00000557985 RAD54L2Q9Y4B4 1467 aa35.16■■■■□ 3.22
TMEM250-204ENST00000557985 EHMT2Q96KQ7 1210 aa35.14■■■■□ 3.22
TMEM250-204ENST00000557985 CSRNP3Q8WYN3 585 aa35.09■■■■□ 3.21
TMEM250-204ENST00000557985 WDR62O43379 1518 aa35.09■■■■□ 3.21
TMEM250-204ENST00000557985 THOC2Q8NI27 1593 aaKnown RBP35.08■■■■□ 3.21
TMEM250-204ENST00000557985 EEA1Q15075 1411 aa35.07■■■■□ 3.2
TMEM250-204ENST00000557985 CUX2O14529 1486 aa35.04■■■■□ 3.2
TMEM250-204ENST00000557985 KIF27Q86VH2 1401 aa35.01■■■■□ 3.19
TMEM250-204ENST00000557985 ABCA10Q8WWZ4 1543 aa34.95■■■■□ 3.19
TMEM250-204ENST00000557985 TARBP1Q13395 1621 aaKnown RBP34.89■■■■□ 3.18
TMEM250-204ENST00000557985 TDRD9Q8NDG6 1382 aaKnown RBP34.89■■■■□ 3.18
TMEM250-204ENST00000557985 WDR97A6NE52 1622 aa34.84■■■■□ 3.17
TMEM250-204ENST00000557985 IGF1RP08069 1367 aa34.8■■■■□ 3.16
TMEM250-204ENST00000557985 IFT140Q96RY7 1462 aa34.79■■■■□ 3.16
TMEM250-204ENST00000557985 AQRO60306 1485 aaKnown RBP eCLIP34.72■■■■□ 3.15
TMEM250-204ENST00000557985 ZNF608Q9ULD9 1512 aaPredicted RBP34.71■■■■□ 3.15
TMEM250-204ENST00000557985 GAPVD1Q14C86 1478 aa34.71■■■■□ 3.15
TMEM250-204ENST00000557985 ABCA5Q8WWZ7 1642 aa34.69■■■■□ 3.14
TMEM250-204ENST00000557985 UBTFP17480 764 aaKnown RBP34.67■■■■□ 3.14
TMEM250-204ENST00000557985 PRXQ9BXM0 1461 aa34.65■■■■□ 3.14
TMEM250-204ENST00000557985 KIF21BO75037 1637 aa34.65■■■■□ 3.14
TMEM250-204ENST00000557985 RAPGEF2Q9Y4G8 1499 aa34.64■■■■□ 3.14
TMEM250-204ENST00000557985 GOLGA3Q08378 1498 aa34.62■■■■□ 3.13
TMEM250-204ENST00000557985 CARMIL1Q5VZK9 1371 aa34.61■■■■□ 3.13
TMEM250-204ENST00000557985 ERICH3Q5RHP9 1530 aa34.52■■■■□ 3.12
TMEM250-204ENST00000557985 EIF4G3O43432 1585 aaKnown RBP34.5■■■■□ 3.11
TMEM250-204ENST00000557985 PBRM1Q86U86 1689 aa34.5■■■■□ 3.11
TMEM250-204ENST00000557985 GRIN2BQ13224 1484 aa34.47■■■■□ 3.11
TMEM250-204ENST00000557985 TNIKQ9UKE5 1360 aa34.47■■■■□ 3.11
TMEM250-204ENST00000557985 CUL7Q14999 1698 aa34.43■■■■□ 3.1
TMEM250-204ENST00000557985 RANGAP1P46060 587 aaPredicted RBP34.35■■■■□ 3.09
TMEM250-204ENST00000557985 SNAPC4Q5SXM2 1469 aa34.31■■■■□ 3.08
TMEM250-204ENST00000557985 FHAD1B1AJZ9 1412 aa34.3■■■■□ 3.08
TMEM250-204ENST00000557985 CEP162Q5TB80 1403 aa34.27■■■■□ 3.08
TMEM250-204ENST00000557985 ADAMTS12P58397 1594 aa34.26■■■■□ 3.08
TMEM250-204ENST00000557985 FBLN2P98095 1184 aa34.2■■■■□ 3.06
TMEM250-204ENST00000557985 MAGI1Q96QZ7 1491 aaPredicted RBP34.19■■■■□ 3.06
TMEM250-204ENST00000557985 CHMP7Q8WUX9 453 aaPredicted RBP34.16■■■■□ 3.06
TMEM250-204ENST00000557985 CLIP1P30622 1438 aa34.11■■■■□ 3.05
TMEM250-204ENST00000557985 SYNJ2O15056 1496 aa34.09■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms