RNA–Protein interactions for RNA: ENST00000517654.5

FAM49B-202, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49B, Length 1,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-202ENST00000517654 NISCHQ9Y2I1 1504 aa38.82■■■■□ 3.8
FAM49B-202ENST00000517654 CCDC180Q9P1Z9 1646 aa34.03■■■■□ 3.04
FAM49B-202ENST00000517654 ZCCHC6Q5VYS8 1495 aaKnown RBP32.55■■■□□ 2.8
FAM49B-202ENST00000517654 ABCC9O60706 1549 aa32.53■■■□□ 2.8
FAM49B-202ENST00000517654 DCAF1Q9Y4B6 1507 aa32.06■■■□□ 2.72
FAM49B-202ENST00000517654 DCAF8L2P0C7V8 631 aa32.05■■■□□ 2.72
FAM49B-202ENST00000517654 MYO15BQ96JP2 1530 aa31.81■■■□□ 2.68
FAM49B-202ENST00000517654 NACADO15069 1562 aa31.74■■■□□ 2.67
FAM49B-202ENST00000517654 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
FAM49B-202ENST00000517654 SHROOM4Q9ULL8 1493 aa31.38■■■□□ 2.61
FAM49B-202ENST00000517654 SCRIBQ14160 1630 aa31.27■■■□□ 2.6
FAM49B-202ENST00000517654 UNC13AQ9UPW8 1703 aa31.06■■■□□ 2.56
FAM49B-202ENST00000517654 BICRAQ9NZM4 1560 aa30.75■■■□□ 2.51
FAM49B-202ENST00000517654 PABPN1Q86U42 306 aaKnown RBP eCLIP30.59■■■□□ 2.49
FAM49B-202ENST00000517654 CECR2Q9BXF3 1484 aa30.26■■■□□ 2.43
FAM49B-202ENST00000517654 MROH2BQ7Z745 1585 aa30.03■■■□□ 2.4
FAM49B-202ENST00000517654 RSF1Q96T23 1441 aaPredicted RBP29.97■■■□□ 2.39
FAM49B-202ENST00000517654 BAZ1AQ9NRL2 1556 aaPredicted RBP29.96■■■□□ 2.39
FAM49B-202ENST00000517654 SMARCA4P51532 1647 aa29.95■■■□□ 2.38
FAM49B-202ENST00000517654 SUPT5HO00267 1087 aaKnown RBP29.93■■■□□ 2.38
FAM49B-202ENST00000517654 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
FAM49B-202ENST00000517654 WIZO95785 1651 aa29.76■■■□□ 2.36
FAM49B-202ENST00000517654 PEG3Q9GZU2 1588 aa29.58■■■□□ 2.33
FAM49B-202ENST00000517654 ATAD2BQ9ULI0 1458 aa29.52■■■□□ 2.32
FAM49B-202ENST00000517654 CC2D2AQ9P2K1 1620 aa29.45■■■□□ 2.31
FAM49B-202ENST00000517654 SMARCA2P51531 1590 aa29.44■■■□□ 2.3
FAM49B-202ENST00000517654 TOP2AP11388 1531 aaKnown RBP29.39■■■□□ 2.3
FAM49B-202ENST00000517654 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
FAM49B-202ENST00000517654 BAZ1BQ9UIG0 1483 aaKnown RBP29.3■■■□□ 2.28
FAM49B-202ENST00000517654 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
FAM49B-202ENST00000517654 DNAJC5BQ9UF47 199 aa29.19■■■□□ 2.26
FAM49B-202ENST00000517654 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
FAM49B-202ENST00000517654 CFTRP13569 1480 aa28.56■■■□□ 2.16
FAM49B-202ENST00000517654 CADPSQ9ULU8 1353 aa28.5■■■□□ 2.15
FAM49B-202ENST00000517654 NESP48681 1621 aa28.49■■■□□ 2.15
FAM49B-202ENST00000517654 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
FAM49B-202ENST00000517654 PRDM2Q13029 1718 aa28.44■■■□□ 2.14
FAM49B-202ENST00000517654 ABCC8Q09428 1581 aa28.4■■■□□ 2.14
FAM49B-202ENST00000517654 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
FAM49B-202ENST00000517654 FANCD2Q9BXW9 1451 aa28.22■■■□□ 2.11
FAM49B-202ENST00000517654 SYNJ1O43426 1573 aa28.17■■■□□ 2.1
FAM49B-202ENST00000517654 WRNQ14191 1432 aaPredicted RBP eCLIP28.17■■■□□ 2.1
FAM49B-202ENST00000517654 KIF21AQ7Z4S6 1674 aa28.15■■■□□ 2.1
FAM49B-202ENST00000517654 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
FAM49B-202ENST00000517654 PDS5BQ9NTI5 1447 aa28.1■■■□□ 2.09
FAM49B-202ENST00000517654 CUX1P39880 1505 aa28.1■■■□□ 2.09
FAM49B-202ENST00000517654 CEP164Q9UPV0 1460 aa28.06■■■□□ 2.08
FAM49B-202ENST00000517654 BIVM-ERCC5R4GMW8 1640 aa28.04■■■□□ 2.08
FAM49B-202ENST00000517654 TOP2BQ02880 1626 aa28.03■■■□□ 2.08
FAM49B-202ENST00000517654 URB2Q14146 1524 aaKnown RBP27.96■■■□□ 2.07
FAM49B-202ENST00000517654 DNMBPQ6XZF7 1577 aa27.91■■■□□ 2.06
FAM49B-202ENST00000517654 TOPBP1Q92547 1522 aa27.9■■■□□ 2.06
FAM49B-202ENST00000517654 ERCC6Q03468 1493 aa27.84■■■□□ 2.05
FAM49B-202ENST00000517654 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
FAM49B-202ENST00000517654 FGD5Q6ZNL6 1462 aa27.81■■■□□ 2.04
FAM49B-202ENST00000517654 THOC2Q8NI27 1593 aaKnown RBP27.8■■■□□ 2.04
FAM49B-202ENST00000517654 SOGA1O94964 1423 aa27.76■■■□□ 2.03
FAM49B-202ENST00000517654 WDR62O43379 1518 aa27.74■■■□□ 2.03
FAM49B-202ENST00000517654 POLA1P09884 1462 aaPredicted RBP27.74■■■□□ 2.03
FAM49B-202ENST00000517654 RUSC2Q8N2Y8 1516 aa27.73■■■□□ 2.03
FAM49B-202ENST00000517654 RAD54L2Q9Y4B4 1467 aa27.66■■■□□ 2.02
FAM49B-202ENST00000517654 FAM9AQ8IZU1 332 aaPredicted RBP27.66■■■□□ 2.02
FAM49B-202ENST00000517654 CUX2O14529 1486 aa27.59■■■□□ 2.01
FAM49B-202ENST00000517654 WDR97A6NE52 1622 aa27.57■■■□□ 2
FAM49B-202ENST00000517654 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
FAM49B-202ENST00000517654 ABCA10Q8WWZ4 1543 aa27.53■■■□□ 2
FAM49B-202ENST00000517654 EEA1Q15075 1411 aa27.48■■□□□ 1.99
FAM49B-202ENST00000517654 KIF27Q86VH2 1401 aa27.45■■□□□ 1.98
FAM49B-202ENST00000517654 LOC105371045A0A1W2PR82 267 aa27.41■■□□□ 1.98
FAM49B-202ENST00000517654 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
FAM49B-202ENST00000517654 ABCA5Q8WWZ7 1642 aa27.4■■□□□ 1.98
FAM49B-202ENST00000517654 CSRNP3Q8WYN3 585 aa27.39■■□□□ 1.98
FAM49B-202ENST00000517654 TDRD9Q8NDG6 1382 aaKnown RBP27.38■■□□□ 1.97
FAM49B-202ENST00000517654 ZNF608Q9ULD9 1512 aaPredicted RBP27.37■■□□□ 1.97
FAM49B-202ENST00000517654 EHMT2Q96KQ7 1210 aa27.31■■□□□ 1.96
FAM49B-202ENST00000517654 IGF1RP08069 1367 aa27.31■■□□□ 1.96
FAM49B-202ENST00000517654 AQRO60306 1485 aaKnown RBP eCLIP27.3■■□□□ 1.969e-8■■■■■ 31.5
FAM49B-202ENST00000517654 GAPVD1Q14C86 1478 aa27.28■■□□□ 1.96
FAM49B-202ENST00000517654 KIF21BO75037 1637 aa27.25■■□□□ 1.95
FAM49B-202ENST00000517654 EIF4G3O43432 1585 aaKnown RBP27.25■■□□□ 1.95
FAM49B-202ENST00000517654 PRXQ9BXM0 1461 aa27.24■■□□□ 1.95
FAM49B-202ENST00000517654 PBRM1Q86U86 1689 aa27.23■■□□□ 1.95
FAM49B-202ENST00000517654 RAPGEF2Q9Y4G8 1499 aa27.2■■□□□ 1.94
FAM49B-202ENST00000517654 ERICH3Q5RHP9 1530 aa27.18■■□□□ 1.94
FAM49B-202ENST00000517654 GOLGA3Q08378 1498 aa27.14■■□□□ 1.94
FAM49B-202ENST00000517654 CARMIL1Q5VZK9 1371 aa27.12■■□□□ 1.93
FAM49B-202ENST00000517654 CUL7Q14999 1698 aa27.12■■□□□ 1.93
FAM49B-202ENST00000517654 GRIN2BQ13224 1484 aa27.12■■□□□ 1.93
FAM49B-202ENST00000517654 ADAMTS12P58397 1594 aa27.06■■□□□ 1.92
FAM49B-202ENST00000517654 SNAPC4Q5SXM2 1469 aa27.04■■□□□ 1.92
FAM49B-202ENST00000517654 TNIKQ9UKE5 1360 aa26.98■■□□□ 1.91
FAM49B-202ENST00000517654 UBTFP17480 764 aaKnown RBP26.97■■□□□ 1.91
FAM49B-202ENST00000517654 FHAD1B1AJZ9 1412 aa26.97■■□□□ 1.91
FAM49B-202ENST00000517654 MAGI1Q96QZ7 1491 aaPredicted RBP26.93■■□□□ 1.9
FAM49B-202ENST00000517654 SYNJ2O15056 1496 aa26.84■■□□□ 1.89
FAM49B-202ENST00000517654 CEP162Q5TB80 1403 aa26.84■■□□□ 1.89
FAM49B-202ENST00000517654 GRIN2AQ12879 1464 aa26.82■■□□□ 1.88
FAM49B-202ENST00000517654 CTTNBP2Q8WZ74 1663 aa26.81■■□□□ 1.88
FAM49B-202ENST00000517654 CHD1O14646 1710 aa26.75■■□□□ 1.87
FAM49B-202ENST00000517654 CEP170Q5SW79 1584 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms