RNA–Protein interactions for RNA: ENST00000448040.2

TMEM250-203, Transcript of transmembrane protein 250, humanhuman

TSL 2

Gene TMEM250, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM250-203ENST00000448040 NISCHQ9Y2I1 1504 aa58.74■■■■■ 6.99
TMEM250-203ENST00000448040 CCDC180Q9P1Z9 1646 aa52.64■■■■■ 6.02
TMEM250-203ENST00000448040 ABCC9O60706 1549 aa52.18■■■■■ 5.94
TMEM250-203ENST00000448040 RB1CC1Q8TDY2 1594 aa49.89■■■■■ 5.58
TMEM250-203ENST00000448040 NACADO15069 1562 aa49.62■■■■■ 5.53
TMEM250-203ENST00000448040 DCAF8L2P0C7V8 631 aa49.37■■■■■ 5.49
TMEM250-203ENST00000448040 MYO15BQ96JP2 1530 aa49.04■■■■■ 5.44
TMEM250-203ENST00000448040 UNC13AQ9UPW8 1703 aa48.83■■■■■ 5.41
TMEM250-203ENST00000448040 ZCCHC6Q5VYS8 1495 aaKnown RBP48.78■■■■■ 5.4
TMEM250-203ENST00000448040 PABPN1Q86U42 306 aaKnown RBP eCLIP48.58■■■■■ 5.37
TMEM250-203ENST00000448040 DCAF1Q9Y4B6 1507 aa48.56■■■■■ 5.36
TMEM250-203ENST00000448040 DNAJC5BQ9UF47 199 aa48.52■■■■■ 5.36
TMEM250-203ENST00000448040 BICRAQ9NZM4 1560 aa48.39■■■■■ 5.34
TMEM250-203ENST00000448040 SCRIBQ14160 1630 aa47.95■■■■■ 5.27
TMEM250-203ENST00000448040 SHROOM4Q9ULL8 1493 aa47.79■■■■■ 5.24
TMEM250-203ENST00000448040 CC2D2AQ9P2K1 1620 aa47.19■■■■■ 5.15
TMEM250-203ENST00000448040 EIF4G1Q04637 1599 aaKnown RBP47.17■■■■■ 5.14
TMEM250-203ENST00000448040 CECR2Q9BXF3 1484 aa46.96■■■■■ 5.11
TMEM250-203ENST00000448040 SMARCA4P51532 1647 aa45.79■■■■■ 4.92
TMEM250-203ENST00000448040 NCAPD3P42695 1498 aa45.75■■■■■ 4.91
TMEM250-203ENST00000448040 ATAD2BQ9ULI0 1458 aa45.68■■■■■ 4.9
TMEM250-203ENST00000448040 SMARCA2P51531 1590 aa45.62■■■■■ 4.89
TMEM250-203ENST00000448040 BAZ1AQ9NRL2 1556 aaPredicted RBP45.6■■■■■ 4.89
TMEM250-203ENST00000448040 HMGXB3Q12766 1538 aa45.51■■■■■ 4.88
TMEM250-203ENST00000448040 PEG3Q9GZU2 1588 aa45.33■■■■■ 4.85
TMEM250-203ENST00000448040 BAZ1BQ9UIG0 1483 aaKnown RBP45.29■■■■■ 4.84
TMEM250-203ENST00000448040 MROH2BQ7Z745 1585 aa45.26■■■■■ 4.84
TMEM250-203ENST00000448040 ERCC6Q03468 1493 aa45.04■■■■■ 4.8
TMEM250-203ENST00000448040 NESP48681 1621 aa44.93■■■■■ 4.78
TMEM250-203ENST00000448040 CUX2O14529 1486 aa44.85■■■■■ 4.77
TMEM250-203ENST00000448040 WIZO95785 1651 aa44.79■■■■■ 4.76
TMEM250-203ENST00000448040 LAMC3Q9Y6N6 1575 aa44.73■■■■■ 4.75
TMEM250-203ENST00000448040 THOC2Q8NI27 1593 aaKnown RBP44.46■■■■■ 4.71
TMEM250-203ENST00000448040 KIF21AQ7Z4S6 1674 aa44.45■■■■■ 4.71
TMEM250-203ENST00000448040 RSF1Q96T23 1441 aaPredicted RBP44.43■■■■■ 4.7
TMEM250-203ENST00000448040 PDS5BQ9NTI5 1447 aa44.41■■■■■ 4.7
TMEM250-203ENST00000448040 CADPSQ9ULU8 1353 aa44.38■■■■■ 4.69
TMEM250-203ENST00000448040 DNAJC5Q9H3Z4 198 aa44.31■■■■■ 4.68
TMEM250-203ENST00000448040 TOP2AP11388 1531 aaKnown RBP44.24■■■■■ 4.67
TMEM250-203ENST00000448040 MRC2Q9UBG0 1479 aa44.02■■■■■ 4.64
TMEM250-203ENST00000448040 CFTRP13569 1480 aa43.96■■■■■ 4.63
TMEM250-203ENST00000448040 CEP164Q9UPV0 1460 aa43.94■■■■■ 4.62
TMEM250-203ENST00000448040 WDR62O43379 1518 aa43.91■■■■■ 4.62
TMEM250-203ENST00000448040 FANCD2Q9BXW9 1451 aa43.9■■■■■ 4.62
TMEM250-203ENST00000448040 PRDM2Q13029 1718 aa43.72■■■■■ 4.59
TMEM250-203ENST00000448040 CCDC88BA6NC98 1476 aa43.69■■■■■ 4.58
TMEM250-203ENST00000448040 URB2Q14146 1524 aaKnown RBP43.52■■■■■ 4.56
TMEM250-203ENST00000448040 TOPBP1Q92547 1522 aa43.12■■■■■ 4.49
TMEM250-203ENST00000448040 ABCC8Q09428 1581 aa43.07■■■■■ 4.48
TMEM250-203ENST00000448040 IFT140Q96RY7 1462 aa43.03■■■■■ 4.48
TMEM250-203ENST00000448040 DNMBPQ6XZF7 1577 aa43.03■■■■■ 4.48
TMEM250-203ENST00000448040 ZNF608Q9ULD9 1512 aaPredicted RBP42.9■■■■■ 4.46
TMEM250-203ENST00000448040 OSCARQ8IYS5 282 aa42.8■■■■■ 4.44
TMEM250-203ENST00000448040 EIF4G3O43432 1585 aaKnown RBP42.75■■■■■ 4.43
TMEM250-203ENST00000448040 SUPT5HO00267 1087 aaKnown RBP42.74■■■■■ 4.43
TMEM250-203ENST00000448040 TARBP1Q13395 1621 aaKnown RBP42.73■■■■■ 4.43
TMEM250-203ENST00000448040 POLA1P09884 1462 aaPredicted RBP42.7■■■■■ 4.43
TMEM250-203ENST00000448040 AQRO60306 1485 aaKnown RBP eCLIP42.55■■■■■ 4.4
TMEM250-203ENST00000448040 TRIM41Q8WV44 630 aa42.55■■■■■ 4.4
TMEM250-203ENST00000448040 RAD54L2Q9Y4B4 1467 aa42.52■■■■■ 4.4
TMEM250-203ENST00000448040 CUX1P39880 1505 aa42.51■■■■■ 4.4
TMEM250-203ENST00000448040 FGD5Q6ZNL6 1462 aa42.49■■■■■ 4.39
TMEM250-203ENST00000448040 SOGA1O94964 1423 aa42.49■■■■■ 4.39
TMEM250-203ENST00000448040 CHD1O14646 1710 aa42.4■■■■■ 4.38
TMEM250-203ENST00000448040 WDR97A6NE52 1622 aa42.36■■■■■ 4.37
TMEM250-203ENST00000448040 TDRD9Q8NDG6 1382 aaKnown RBP42.34■■■■■ 4.37
TMEM250-203ENST00000448040 RIMBP3CA6NJZ7 1639 aa42.29■■■■■ 4.36
TMEM250-203ENST00000448040 RIMBP3BA6NNM3 1639 aa42.29■■■■■ 4.36
TMEM250-203ENST00000448040 RIMBP3Q9UFD9 1639 aa42.29■■■■■ 4.36
TMEM250-203ENST00000448040 FBLN2P98095 1184 aa42.19■■■■■ 4.34
TMEM250-203ENST00000448040 SNAPC4Q5SXM2 1469 aa42.17■■■■■ 4.34
TMEM250-203ENST00000448040 ARHGEF11O15085 1522 aa42.16■■■■■ 4.34
TMEM250-203ENST00000448040 GRIN2BQ13224 1484 aa42.11■■■■■ 4.33
TMEM250-203ENST00000448040 MAGI1Q96QZ7 1491 aaPredicted RBP42.08■■■■■ 4.33
TMEM250-203ENST00000448040 PBRM1Q86U86 1689 aa42.06■■■■■ 4.32
TMEM250-203ENST00000448040 ABCA10Q8WWZ4 1543 aa42.04■■■■■ 4.32
TMEM250-203ENST00000448040 GAPVD1Q14C86 1478 aa42■■■■■ 4.31
TMEM250-203ENST00000448040 BIVM-ERCC5R4GMW8 1640 aa42■■■■■ 4.31
TMEM250-203ENST00000448040 ABCA5Q8WWZ7 1642 aa41.98■■■■■ 4.31
TMEM250-203ENST00000448040 TOP2BQ02880 1626 aa41.96■■■■■ 4.31
TMEM250-203ENST00000448040 CHMP7Q8WUX9 453 aaPredicted RBP41.95■■■■■ 4.31
TMEM250-203ENST00000448040 WRNQ14191 1432 aaPredicted RBP eCLIP41.94■■■■■ 4.3
TMEM250-203ENST00000448040 SYNJ2O15056 1496 aa41.92■■■■■ 4.3
TMEM250-203ENST00000448040 SYNJ1O43426 1573 aa41.91■■■■■ 4.3
TMEM250-203ENST00000448040 CLASP1Q7Z460 1538 aa41.86■■■■■ 4.29
TMEM250-203ENST00000448040 CYB5RLQ6IPT4 315 aa41.77■■■■■ 4.28
TMEM250-203ENST00000448040 ARAP1Q96P48 1450 aa41.76■■■■■ 4.28
TMEM250-203ENST00000448040 ADAMTS12P58397 1594 aa41.63■■■■■ 4.25
TMEM250-203ENST00000448040 GRIN2AQ12879 1464 aa41.57■■■■■ 4.25
TMEM250-203ENST00000448040 ERICH3Q5RHP9 1530 aa41.53■■■■■ 4.24
TMEM250-203ENST00000448040 FHAD1B1AJZ9 1412 aa41.48■■■■■ 4.23
TMEM250-203ENST00000448040 CEP170Q5SW79 1584 aa41.42■■■■■ 4.22
TMEM250-203ENST00000448040 NUP160Q12769 1436 aa41.4■■■■■ 4.22
TMEM250-203ENST00000448040 SHROOM2Q13796 1616 aa41.22■■■■■ 4.19
TMEM250-203ENST00000448040 ERCC6L2Q5T890 1561 aa41.22■■■■■ 4.19
TMEM250-203ENST00000448040 TRHP20396 242 aaPredicted RBP41.21■■■■■ 4.19
TMEM250-203ENST00000448040 KIF27Q86VH2 1401 aa41.12■■■■■ 4.17
TMEM250-203ENST00000448040 CUL7Q14999 1698 aa41.04■■■■■ 4.16
TMEM250-203ENST00000448040 RUSC2Q8N2Y8 1516 aa41.03■■■■■ 4.16
TMEM250-203ENST00000448040 IGF1RP08069 1367 aa41.01■■■■■ 4.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms