Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 RPL13A-214ENST00000624069 1122 ntTSL 1 (best)31.71■■■□□ 2.674e-6■□□□□ 9.3
PABPN1Q86U42 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.674e-6■□□□□ 9.3
PABPN1Q86U42 RPL13A-206ENST00000476268 1623 ntTSL 331.57■■■□□ 2.644e-6■□□□□ 9.3
PABPN1Q86U42 RPL13A-209ENST00000479992 850 ntTSL 331.4■■■□□ 2.624e-6■□□□□ 9.3
PABPN1Q86U42 RPL5-201ENST00000315741 681 ntTSL 531.09■■■□□ 2.574e-6■□□□□ 9.3
PABPN1Q86U42 RPL13A-202ENST00000467825 660 ntTSL 530.83■■■□□ 2.534e-6■□□□□ 9.3
PABPN1Q86U42 SMPD4-216ENST00000461187 659 ntTSL 330.8■■■□□ 2.524e-6■□□□□ 9.3
PABPN1Q86U42 RPL13A-204ENST00000472481 728 ntTSL 229.83■■■□□ 2.374e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC29■■■□□ 2.234e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.234e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-208ENST00000554843 655 ntTSL 227.97■■■□□ 2.074e-6■□□□□ 9.3
PABPN1Q86U42 RPL13A-210ENST00000484279 794 ntTSL 527.77■■■□□ 2.044e-6■□□□□ 9.3
PABPN1Q86U42 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC27.77■■■□□ 2.044e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC27.59■■■□□ 2.014e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC27.09■■□□□ 1.934e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC27.03■■□□□ 1.924e-6■□□□□ 9.3
PABPN1Q86U42 NINL-202ENST00000336104 439 ntTSL 326.44■■□□□ 1.824e-6■□□□□ 9.3
PABPN1Q86U42 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.791e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.744e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-222ENST00000487647 1608 ntTSL 1 (best)25.87■■□□□ 1.734e-6■□□□□ 9.3
PABPN1Q86U42 SMPD4-204ENST00000430682 820 ntTSL 325.64■■□□□ 1.74e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-230ENST00000527114 1499 ntTSL 525.34■■□□□ 1.654e-6■□□□□ 9.3
PABPN1Q86U42 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC25.04■■□□□ 1.61e-6■□□□□ 9.3
PABPN1Q86U42 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.534e-6■□□□□ 9.3
PABPN1Q86U42 RPL13A-212ENST00000488946 2312 ntTSL 224.47■■□□□ 1.514e-6■□□□□ 9.3
PABPN1Q86U42 CEP250-207ENST00000425934 2156 ntTSL 524.46■■□□□ 1.514e-6■□□□□ 9.3
PABPN1Q86U42 TPI1-202ENST00000396705 1231 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.454e-6■□□□□ 9.3
PABPN1Q86U42 TPI1-208ENST00000495834 820 ntTSL 223.84■■□□□ 1.414e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-206ENST00000554541 925 ntTSL 223.69■■□□□ 1.384e-6■□□□□ 9.3
PABPN1Q86U42 XYLT2-206ENST00000571021 2174 nt23.41■■□□□ 1.344e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC23.2■■□□□ 1.34e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC23.03■■□□□ 1.284e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC22.91■■□□□ 1.264e-6■□□□□ 9.3
PABPN1Q86U42 DCTN1-221ENST00000491465 2444 ntTSL 1 (best)22.52■■□□□ 1.24e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-236ENST00000531196 842 ntTSL 322.4■■□□□ 1.184e-6■□□□□ 9.3
PABPN1Q86U42 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.134e-6■□□□□ 9.3
PABPN1Q86U42 TPI1-209ENST00000535434 1587 ntTSL 2 BASIC21.61■■□□□ 1.054e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.964e-6■□□□□ 9.3
PABPN1Q86U42 TPI1-203ENST00000462761 374 ntTSL 320.75■□□□□ 0.914e-6■□□□□ 9.3
PABPN1Q86U42 TPI1-207ENST00000493987 839 ntTSL 320.57■□□□□ 0.884e-6■□□□□ 9.3
PABPN1Q86U42 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.841e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-211ENST00000555764 1002 ntTSL 2 BASIC20.24■□□□□ 0.834e-6■□□□□ 9.3
PABPN1Q86U42 CEP250-209ENST00000461386 2295 ntTSL 220.1■□□□□ 0.814e-6■□□□□ 9.3
PABPN1Q86U42 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC19.99■□□□□ 0.791e-6■□□□□ 9.3
PABPN1Q86U42 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.741e-6■□□□□ 9.3
PABPN1Q86U42 SH3PXD2A-201ENST00000315994 5504 ntTSL 1 (best)19.41■□□□□ 0.74e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-207ENST00000554620 790 ntTSL 518.35■□□□□ 0.534e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-209ENST00000554961 814 ntTSL 218.35■□□□□ 0.534e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-227ENST00000526570 5528 ntTSL 1 (best)18.15■□□□□ 0.54e-6■□□□□ 9.3
PABPN1Q86U42 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.494e-6■□□□□ 9.3
PABPN1Q86U42 XYLT2-202ENST00000376550 3267 ntTSL 1 (best)18.04■□□□□ 0.484e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC17.74■□□□□ 0.434e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC17.28■□□□□ 0.364e-6■□□□□ 9.3
PABPN1Q86U42 RPL5-203ENST00000461952 1116 ntTSL 217.28■□□□□ 0.364e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-210ENST00000555050 309 ntTSL 216.84■□□□□ 0.294e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC16.16■□□□□ 0.184e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.014e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-203ENST00000553688 787 ntTSL 514.97□□□□□ -0.014e-6■□□□□ 9.3
PABPN1Q86U42 PYGB-201ENST00000216962 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.024e-6■□□□□ 9.3
PABPN1Q86U42 AC006030.1-201ENST00000451608 5059 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.034e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.274e-6■□□□□ 9.3
PABPN1Q86U42 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC12.92□□□□□ -0.344e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC12.88□□□□□ -0.354e-6■□□□□ 9.3
PABPN1Q86U42 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.44e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.454e-6■□□□□ 9.3
PABPN1Q86U42 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.534e-6■□□□□ 9.3
PABPN1Q86U42 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.854e-6■□□□□ 9.3
PABPN1Q86U42 RPL5-204ENST00000470843 694 ntTSL 39.24□□□□□ -0.934e-6■□□□□ 9.3
PABPN1Q86U42 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.161e-6■□□□□ 9.3
PABPN1Q86U42 SF1-211ENST00000448404 2778 ntTSL 1 (best)24.38■■□□□ 1.491e-6■□□□□ 9.3
PABPN1Q86U42 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC22.27■■□□□ 1.151e-6■□□□□ 9.3
PABPN1Q86U42 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 11e-6■□□□□ 9.3
PABPN1Q86U42 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC21.29■■□□□ 11e-6■□□□□ 9.3
PABPN1Q86U42 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.621e-6■□□□□ 9.3
PABPN1Q86U42 AL662899.3-203ENST00000409691 1903 ntTSL 325.91■■□□□ 1.747e-7■□□□□ 9.3
PABPN1Q86U42 LY6G5B-209ENST00000471088 677 ntTSL 522.76■■□□□ 1.237e-7■□□□□ 9.3
PABPN1Q86U42 AL662899.3-201ENST00000375880 2487 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.797e-7■□□□□ 9.3
PABPN1Q86U42 LY6G5B-207ENST00000375864 2654 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.537e-7■□□□□ 9.3
PABPN1Q86U42 POLR3D-204ENST00000518039 1202 ntTSL 243.43■■■■■ 4.543e-6■□□□□ 9.3
PABPN1Q86U42 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.463e-6■□□□□ 9.3
PABPN1Q86U42 ARAP1-208ENST00000452383 994 ntTSL 329.76■■■□□ 2.353e-6■□□□□ 9.3
PABPN1Q86U42 ARAP1-206ENST00000427971 1101 ntTSL 528.08■■■□□ 2.093e-6■□□□□ 9.3
PABPN1Q86U42 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.223e-6■□□□□ 9.3
PABPN1Q86U42 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.883e-6■□□□□ 9.3
PABPN1Q86U42 CCNI-208ENST00000515468 636 ntTSL 39.69□□□□□ -0.863e-6■□□□□ 9.3
PABPN1Q86U42 GPBP1L1-204ENST00000467032 592 ntTSL 28.3□□□□□ -1.083e-6■□□□□ 9.3
PABPN1Q86U42 DAZAP1-204ENST00000586579 619 ntTSL 345.41■■■■■ 4.866e-12■□□□□ 9.3
PABPN1Q86U42 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC15.75■□□□□ 0.112e-80■□□□□ 9.2
PABPN1Q86U42 EPS8L2-215ENST00000530093 414 ntTSL 446.87■■■■■ 5.093e-13■□□□□ 9.2
PABPN1Q86U42 EPS8L2-209ENST00000527199 540 ntTSL 345.84■■■■■ 4.933e-13■□□□□ 9.2
PABPN1Q86U42 EPS8L2-210ENST00000527807 814 ntTSL 545.84■■■■■ 4.933e-13■□□□□ 9.2
PABPN1Q86U42 EPS8L2-229ENST00000534755 474 ntTSL 443.94■■■■■ 4.623e-13■□□□□ 9.2
PABPN1Q86U42 EPS8L2-224ENST00000533500 587 ntTSL 343.25■■■■■ 4.513e-13■□□□□ 9.2
PABPN1Q86U42 EPS8L2-203ENST00000524763 580 ntTSL 338.51■■■■□ 3.763e-13■□□□□ 9.2
PABPN1Q86U42 EPS8L2-219ENST00000531348 582 ntTSL 235.89■■■■□ 3.343e-13■□□□□ 9.2
PABPN1Q86U42 EPS8L2-206ENST00000526380 545 ntTSL 331.6■■■□□ 2.653e-13■□□□□ 9.2
PABPN1Q86U42 EPS8L2-214ENST00000529680 551 ntTSL 430.64■■■□□ 2.53e-13■□□□□ 9.2
PABPN1Q86U42 FAM192A-203ENST00000562324 597 ntTSL 218.5■□□□□ 0.551e-7■□□□□ 9.2
PABPN1Q86U42 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.091e-7■□□□□ 9.2
PABPN1Q86U42 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.121e-7■□□□□ 9.2
Retrieved 100 of 8,254 protein–RNA pairs in 48.6 ms