RNA–Protein interactions for RNA: ENST00000237654.8

CCNI-201, Transcript of cyclin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNI, Length 2,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI-201ENST00000237654 NISCHQ9Y2I1 1504 aa26.82■■□□□ 1.88
CCNI-201ENST00000237654 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
CCNI-201ENST00000237654 SUPT5HO00267 1087 aaKnown RBP23.53■■□□□ 1.36
CCNI-201ENST00000237654 DCAF8L2P0C7V8 631 aa23.05■■□□□ 1.28
CCNI-201ENST00000237654 MYO15BQ96JP2 1530 aa22.76■■□□□ 1.23
CCNI-201ENST00000237654 CHIC1Q5VXU3 224 aa22.71■■□□□ 1.23
CCNI-201ENST00000237654 ZCCHC6Q5VYS8 1495 aaKnown RBP22.67■■□□□ 1.22
CCNI-201ENST00000237654 PCGF6Q9BYE7 350 aa22.59■■□□□ 1.21
CCNI-201ENST00000237654 HRCP23327 699 aa22.48■■□□□ 1.19
CCNI-201ENST00000237654 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
CCNI-201ENST00000237654 PPARGC1BQ86YN6 1023 aaKnown RBP22.44■■□□□ 1.18
CCNI-201ENST00000237654 LOC105371045A0A1W2PR82 267 aa22.39■■□□□ 1.18
CCNI-201ENST00000237654 EHMT2Q96KQ7 1210 aa21.99■■□□□ 1.11
CCNI-201ENST00000237654 DCAF1Q9Y4B6 1507 aa21.87■■□□□ 1.09
CCNI-201ENST00000237654 FAM9AQ8IZU1 332 aaPredicted RBP21.87■■□□□ 1.09
CCNI-201ENST00000237654 TRIM26Q12899 539 aaPredicted RBP21.71■■□□□ 1.07
CCNI-201ENST00000237654 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
CCNI-201ENST00000237654 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
CCNI-201ENST00000237654 RSF1Q96T23 1441 aaPredicted RBP21.51■■□□□ 1.03
CCNI-201ENST00000237654 ABCC9O60706 1549 aa21.42■■□□□ 1.02
CCNI-201ENST00000237654 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
CCNI-201ENST00000237654 TTBK1Q5TCY1 1321 aaPredicted RBP21.27■■□□□ 1
CCNI-201ENST00000237654 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
CCNI-201ENST00000237654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.17■□□□□ 0.98
CCNI-201ENST00000237654 ZEB1P37275 1124 aaPredicted RBP21.13■□□□□ 0.97
CCNI-201ENST00000237654 SCAF1Q9H7N4 1312 aaKnown RBP21.1■□□□□ 0.97
CCNI-201ENST00000237654 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
CCNI-201ENST00000237654 CCER1Q8TC90 406 aaPredicted RBP20.97■□□□□ 0.95
CCNI-201ENST00000237654 WIZO95785 1651 aa20.97■□□□□ 0.95
CCNI-201ENST00000237654 PELP1Q8IZL8 1130 aaKnown RBP20.88■□□□□ 0.93
CCNI-201ENST00000237654 NEUROD1Q13562 356 aa20.76■□□□□ 0.91
CCNI-201ENST00000237654 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
CCNI-201ENST00000237654 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
CCNI-201ENST00000237654 NACADO15069 1562 aa20.67■□□□□ 0.9
CCNI-201ENST00000237654 DIEXFQ68CQ4 756 aaKnown RBP20.67■□□□□ 0.9
CCNI-201ENST00000237654 UBTFP17480 764 aaKnown RBP20.66■□□□□ 0.9
CCNI-201ENST00000237654 SOGA1O94964 1423 aa20.66■□□□□ 0.9
CCNI-201ENST00000237654 ACIN1Q9UKV3 1341 aaKnown RBP20.62■□□□□ 0.89
CCNI-201ENST00000237654 RANGAP1P46060 587 aaPredicted RBP20.6■□□□□ 0.89
CCNI-201ENST00000237654 RUSC2Q8N2Y8 1516 aa20.59■□□□□ 0.89
CCNI-201ENST00000237654 GTF3C3Q9Y5Q9 886 aa20.57■□□□□ 0.88
CCNI-201ENST00000237654 PABPN1Q86U42 306 aaKnown RBP eCLIP20.57■□□□□ 0.883e-6■□□□□ 9.3
CCNI-201ENST00000237654 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
CCNI-201ENST00000237654 CEP162Q5TB80 1403 aa20.55■□□□□ 0.88
CCNI-201ENST00000237654 YTHDC1Q96MU7 727 aaKnown RBP20.54■□□□□ 0.88
CCNI-201ENST00000237654 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
CCNI-201ENST00000237654 HNRNPUL2Q1KMD3 747 aaKnown RBP20.51■□□□□ 0.87
CCNI-201ENST00000237654 CSRNP3Q8WYN3 585 aa20.48■□□□□ 0.87
CCNI-201ENST00000237654 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
CCNI-201ENST00000237654 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
CCNI-201ENST00000237654 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
CCNI-201ENST00000237654 TNIKQ9UKE5 1360 aa20.35■□□□□ 0.85
CCNI-201ENST00000237654 CENPBP07199 599 aaPredicted RBP20.34■□□□□ 0.85
CCNI-201ENST00000237654 SMARCA4P51532 1647 aa20.33■□□□□ 0.85
CCNI-201ENST00000237654 ZNF316A6NFI3 1004 aaPredicted RBP20.32■□□□□ 0.84
CCNI-201ENST00000237654 MIER1Q8N108 512 aa20.29■□□□□ 0.84
CCNI-201ENST00000237654 GOLGA3Q08378 1498 aa20.16■□□□□ 0.82
CCNI-201ENST00000237654 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
CCNI-201ENST00000237654 EEA1Q15075 1411 aa20.12■□□□□ 0.81
CCNI-201ENST00000237654 APLP2Q06481 763 aa20.11■□□□□ 0.81
CCNI-201ENST00000237654 CLIP1P30622 1438 aa20.1■□□□□ 0.81
CCNI-201ENST00000237654 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
CCNI-201ENST00000237654 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
CCNI-201ENST00000237654 MYT1Q01538 1121 aa20■□□□□ 0.79
CCNI-201ENST00000237654 CEP164Q9UPV0 1460 aa19.98■□□□□ 0.79
CCNI-201ENST00000237654 ITGAEP38570 1179 aa19.97■□□□□ 0.79
CCNI-201ENST00000237654 KANK4Q5T7N3 995 aaPredicted RBP19.96■□□□□ 0.79
CCNI-201ENST00000237654 BICRAQ9NZM4 1560 aa19.94■□□□□ 0.78
CCNI-201ENST00000237654 VPS8Q8N3P4 1428 aa19.94■□□□□ 0.78
CCNI-201ENST00000237654 KIF21BO75037 1637 aa19.85■□□□□ 0.77
CCNI-201ENST00000237654 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
CCNI-201ENST00000237654 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.77
CCNI-201ENST00000237654 PEG3Q9GZU2 1588 aa19.79■□□□□ 0.76
CCNI-201ENST00000237654 DHX57Q6P158 1386 aaKnown RBP19.77■□□□□ 0.76
CCNI-201ENST00000237654 KCNH8Q96L42 1107 aa19.77■□□□□ 0.76
CCNI-201ENST00000237654 ARAP1Q96P48 1450 aa19.68■□□□□ 0.74
CCNI-201ENST00000237654 HIRIP3Q9BW71 556 aaPredicted RBP19.63■□□□□ 0.73
CCNI-201ENST00000237654 SUPT16HQ9Y5B9 1047 aaKnown RBP19.63■□□□□ 0.73
CCNI-201ENST00000237654 ATP1B4Q9UN42 357 aaPredicted RBP19.62■□□□□ 0.73
CCNI-201ENST00000237654 P3H3Q8IVL6 736 aa19.62■□□□□ 0.73
CCNI-201ENST00000237654 TOP2BQ02880 1626 aa19.6■□□□□ 0.73
CCNI-201ENST00000237654 BCANQ96GW7 911 aa19.59■□□□□ 0.73
CCNI-201ENST00000237654 CLSPNQ9HAW4 1339 aa19.58■□□□□ 0.73
CCNI-201ENST00000237654 PRXQ9BXM0 1461 aa19.58■□□□□ 0.72
CCNI-201ENST00000237654 SIN3AQ96ST3 1273 aa19.57■□□□□ 0.72
CCNI-201ENST00000237654 CUX1P39880 1505 aa19.53■□□□□ 0.72
CCNI-201ENST00000237654 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.72
CCNI-201ENST00000237654 CCNB3Q8WWL7 1395 aa19.52■□□□□ 0.72
CCNI-201ENST00000237654 DDX10Q13206 875 aaKnown RBP19.51■□□□□ 0.71
CCNI-201ENST00000237654 RAB3GAP2Q9H2M9 1393 aa19.48■□□□□ 0.71
CCNI-201ENST00000237654 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
CCNI-201ENST00000237654 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
CCNI-201ENST00000237654 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
CCNI-201ENST00000237654 RRBP1Q9P2E9 1410 aaKnown RBP19.45■□□□□ 0.7
CCNI-201ENST00000237654 BIVM-ERCC5R4GMW8 1640 aa19.44■□□□□ 0.7
CCNI-201ENST00000237654 TSHZ2Q9NRE2 1034 aa19.4■□□□□ 0.7
CCNI-201ENST00000237654 CUX2O14529 1486 aa19.38■□□□□ 0.69
CCNI-201ENST00000237654 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
CCNI-201ENST00000237654 PHLDB1Q86UU1 1377 aa19.36■□□□□ 0.69
CCNI-201ENST00000237654 IGF1RP08069 1367 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms