RNA–Protein interactions for RNA: ENST00000216962.8

PYGB-201, Transcript of glycogen phosphorylase B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PYGB, Length 4,134 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYGB-201ENST00000216962 NISCHQ9Y2I1 1504 aa18.58■□□□□ 0.56
PYGB-201ENST00000216962 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
PYGB-201ENST00000216962 SUPT5HO00267 1087 aaKnown RBP16.74■□□□□ 0.27
PYGB-201ENST00000216962 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
PYGB-201ENST00000216962 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
PYGB-201ENST00000216962 PCGF6Q9BYE7 350 aa16.13■□□□□ 0.17
PYGB-201ENST00000216962 HRCP23327 699 aa16.08■□□□□ 0.17
PYGB-201ENST00000216962 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
PYGB-201ENST00000216962 FAM9AQ8IZU1 332 aaPredicted RBP15.8■□□□□ 0.12
PYGB-201ENST00000216962 TTBK1Q5TCY1 1321 aaPredicted RBP15.79■□□□□ 0.12
PYGB-201ENST00000216962 ZEB1P37275 1124 aaPredicted RBP15.77■□□□□ 0.12
PYGB-201ENST00000216962 TRIM26Q12899 539 aaPredicted RBP15.69■□□□□ 0.1
PYGB-201ENST00000216962 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
PYGB-201ENST00000216962 PELP1Q8IZL8 1130 aaKnown RBP15.63■□□□□ 0.09
PYGB-201ENST00000216962 PPARGC1BQ86YN6 1023 aaKnown RBP15.61■□□□□ 0.09
PYGB-201ENST00000216962 LOC105371045A0A1W2PR82 267 aa15.58■□□□□ 0.09
PYGB-201ENST00000216962 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
PYGB-201ENST00000216962 RANGAP1P46060 587 aaPredicted RBP15.55■□□□□ 0.08
PYGB-201ENST00000216962 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.07
PYGB-201ENST00000216962 CCDC180Q9P1Z9 1646 aa15.45■□□□□ 0.06
PYGB-201ENST00000216962 MYO15BQ96JP2 1530 aa15.45■□□□□ 0.06
PYGB-201ENST00000216962 APLP2Q06481 763 aa15.39■□□□□ 0.05
PYGB-201ENST00000216962 CENPBP07199 599 aaPredicted RBP15.32■□□□□ 0.04
PYGB-201ENST00000216962 CCER1Q8TC90 406 aaPredicted RBP15.32■□□□□ 0.04
PYGB-201ENST00000216962 ATP1B4Q9UN42 357 aaPredicted RBP15.2■□□□□ 0.02
PYGB-201ENST00000216962 MYT1Q01538 1121 aa15.13■□□□□ 0.01
PYGB-201ENST00000216962 ABCC9O60706 1549 aa15.12■□□□□ 0.01
PYGB-201ENST00000216962 UBTFP17480 764 aaKnown RBP15.04■□□□□ -0
PYGB-201ENST00000216962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
PYGB-201ENST00000216962 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
PYGB-201ENST00000216962 YTHDC1Q96MU7 727 aaKnown RBP14.96□□□□□ -0.02
PYGB-201ENST00000216962 ACIN1Q9UKV3 1341 aaKnown RBP14.9□□□□□ -0.02
PYGB-201ENST00000216962 PABPN1Q86U42 306 aaKnown RBP eCLIP14.9□□□□□ -0.024e-6■□□□□ 9.3
PYGB-201ENST00000216962 RSF1Q96T23 1441 aaPredicted RBP14.88□□□□□ -0.03
PYGB-201ENST00000216962 SCAF1Q9H7N4 1312 aaKnown RBP14.87□□□□□ -0.03
PYGB-201ENST00000216962 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
PYGB-201ENST00000216962 GTF3C3Q9Y5Q9 886 aa14.83□□□□□ -0.04
PYGB-201ENST00000216962 ITGAEP38570 1179 aa14.79□□□□□ -0.04
PYGB-201ENST00000216962 CNGB1Q14028 1251 aaPredicted RBP14.75□□□□□ -0.05
PYGB-201ENST00000216962 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
PYGB-201ENST00000216962 ZNF316A6NFI3 1004 aaPredicted RBP14.72□□□□□ -0.05
PYGB-201ENST00000216962 HNRNPUL2Q1KMD3 747 aaKnown RBP14.71□□□□□ -0.06
PYGB-201ENST00000216962 NEUROD1Q13562 356 aa14.7□□□□□ -0.06
PYGB-201ENST00000216962 ERICH6Q7L0X2 663 aa14.64□□□□□ -0.07
PYGB-201ENST00000216962 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
PYGB-201ENST00000216962 POLR3GLQ9BT43 218 aa14.61□□□□□ -0.07
PYGB-201ENST00000216962 CEP162Q5TB80 1403 aa14.5□□□□□ -0.09
PYGB-201ENST00000216962 NEFLP07196 543 aa14.5□□□□□ -0.09
PYGB-201ENST00000216962 MYT1LQ9UL68 1186 aa14.5□□□□□ -0.09
PYGB-201ENST00000216962 NACADO15069 1562 aa14.5□□□□□ -0.09
PYGB-201ENST00000216962 EEA1Q15075 1411 aa14.49□□□□□ -0.09
PYGB-201ENST00000216962 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
PYGB-201ENST00000216962 TNIKQ9UKE5 1360 aa14.45□□□□□ -0.1
PYGB-201ENST00000216962 CLSPNQ9HAW4 1339 aa14.43□□□□□ -0.1
PYGB-201ENST00000216962 MROH2BQ7Z745 1585 aa14.42□□□□□ -0.1
PYGB-201ENST00000216962 BAZ1AQ9NRL2 1556 aaPredicted RBP14.38□□□□□ -0.11
PYGB-201ENST00000216962 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
PYGB-201ENST00000216962 MIER1Q8N108 512 aa14.38□□□□□ -0.11
PYGB-201ENST00000216962 WRNQ14191 1432 aaPredicted RBP eCLIP14.33□□□□□ -0.129e-6■■■■■ 50.1
PYGB-201ENST00000216962 CLIP1P30622 1438 aa14.31□□□□□ -0.12
PYGB-201ENST00000216962 WIZO95785 1651 aa14.28□□□□□ -0.12
PYGB-201ENST00000216962 SOGA1O94964 1423 aa14.26□□□□□ -0.13
PYGB-201ENST00000216962 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
PYGB-201ENST00000216962 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
PYGB-201ENST00000216962 SLC4A1APQ9BWU0 796 aaKnown RBP14.23□□□□□ -0.13
PYGB-201ENST00000216962 ABCC8Q09428 1581 aa14.22□□□□□ -0.13
PYGB-201ENST00000216962 TOP2AP11388 1531 aaKnown RBP14.18□□□□□ -0.14
PYGB-201ENST00000216962 FAM50AQ14320 339 aaKnown RBP14.18□□□□□ -0.14
PYGB-201ENST00000216962 BCANQ96GW7 911 aa14.13□□□□□ -0.15
PYGB-201ENST00000216962 VPS8Q8N3P4 1428 aa14.13□□□□□ -0.15
PYGB-201ENST00000216962 ARID3CA6NKF2 412 aa14.13□□□□□ -0.15
PYGB-201ENST00000216962 ANP32CO43423 234 aa14.11□□□□□ -0.15
PYGB-201ENST00000216962 ZNF326Q5BKZ1 582 aaKnown RBP14.09□□□□□ -0.15
PYGB-201ENST00000216962 TRIM52Q96A61 297 aa14.07□□□□□ -0.16
PYGB-201ENST00000216962 FBLN2P98095 1184 aa14.05□□□□□ -0.16
PYGB-201ENST00000216962 DAXXQ9UER7 740 aaPredicted RBP14.05□□□□□ -0.16
PYGB-201ENST00000216962 P3H3Q8IVL6 736 aa14.04□□□□□ -0.16
PYGB-201ENST00000216962 SUPT16HQ9Y5B9 1047 aaKnown RBP14.04□□□□□ -0.16
PYGB-201ENST00000216962 FKBP8Q14318 412 aa14.04□□□□□ -0.16
PYGB-201ENST00000216962 SMARCA4P51532 1647 aa14.02□□□□□ -0.17
PYGB-201ENST00000216962 BCL11AQ9H165 835 aa14.02□□□□□ -0.17
PYGB-201ENST00000216962 RUSC2Q8N2Y8 1516 aa14.01□□□□□ -0.17
PYGB-201ENST00000216962 DDX10Q13206 875 aaKnown RBP14□□□□□ -0.17
PYGB-201ENST00000216962 SMARCA2P51531 1590 aa13.99□□□□□ -0.17
PYGB-201ENST00000216962 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
PYGB-201ENST00000216962 CDK11AQ9UQ88 783 aaPredicted RBP13.96□□□□□ -0.17
PYGB-201ENST00000216962 ANP32EQ9BTT0 268 aa13.94□□□□□ -0.18
PYGB-201ENST00000216962 CCNB3Q8WWL7 1395 aa13.93□□□□□ -0.18
PYGB-201ENST00000216962 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
PYGB-201ENST00000216962 TONSLQ96HA7 1378 aa13.91□□□□□ -0.18
PYGB-201ENST00000216962 DHX57Q6P158 1386 aaKnown RBP13.89□□□□□ -0.19
PYGB-201ENST00000216962 RAPGEF2Q9Y4G8 1499 aa13.89□□□□□ -0.19
PYGB-201ENST00000216962 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
PYGB-201ENST00000216962 KIF21BO75037 1637 aa13.86□□□□□ -0.19
PYGB-201ENST00000216962 TIMELESSQ9UNS1 1208 aa13.83□□□□□ -0.19
PYGB-201ENST00000216962 HNRNPUQ00839 825 aaKnown RBP eCLIP13.83□□□□□ -0.2
PYGB-201ENST00000216962 TSHZ2Q9NRE2 1034 aa13.83□□□□□ -0.2
PYGB-201ENST00000216962 ZNF777Q9ULD5 760 aaPredicted RBP13.79□□□□□ -0.2
PYGB-201ENST00000216962 SLC24A1O60721 1099 aa13.78□□□□□ -0.2
PYGB-201ENST00000216962 SETD5Q9C0A6 1442 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms