RNA–Protein interactions for RNA: ENST00000553809.5

PSMA6-204, Transcript of proteasome subunit alpha 6, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene PSMA6, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-204ENST00000553809 AEBP2Q6ZN18 517 aaPredicted RBP19.38■□□□□ 0.69
PSMA6-204ENST00000553809 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
PSMA6-204ENST00000553809 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
PSMA6-204ENST00000553809 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
PSMA6-204ENST00000553809 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
PSMA6-204ENST00000553809 FOXD1Q16676 465 aa15.38■□□□□ 0.05
PSMA6-204ENST00000553809 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
PSMA6-204ENST00000553809 ADRA2BP18089 450 aa14.55□□□□□ -0.08
PSMA6-204ENST00000553809 PPP6R1Q9UPN7 881 aa14.55□□□□□ -0.08
PSMA6-204ENST00000553809 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
PSMA6-204ENST00000553809 MSH5O43196 834 aa14.4□□□□□ -0.1
PSMA6-204ENST00000553809 CCDC180Q9P1Z9 1646 aa14.4□□□□□ -0.1
PSMA6-204ENST00000553809 ABCC9O60706 1549 aa14.26□□□□□ -0.13
PSMA6-204ENST00000553809 POTEDQ86YR6 584 aa14.22□□□□□ -0.13
PSMA6-204ENST00000553809 DCAF8L2P0C7V8 631 aa13.72□□□□□ -0.21
PSMA6-204ENST00000553809 ZCCHC6Q5VYS8 1495 aaKnown RBP13.64□□□□□ -0.23
PSMA6-204ENST00000553809 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
PSMA6-204ENST00000553809 NACADO15069 1562 aa13.58□□□□□ -0.23
PSMA6-204ENST00000553809 DCAF1Q9Y4B6 1507 aa13.5□□□□□ -0.25
PSMA6-204ENST00000553809 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
PSMA6-204ENST00000553809 MYO15BQ96JP2 1530 aa13.44□□□□□ -0.26
PSMA6-204ENST00000553809 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.274e-6■□□□□ 9.3
PSMA6-204ENST00000553809 PPP4R3CPQ6ZMV5 832 aa13.3□□□□□ -0.28
PSMA6-204ENST00000553809 MAPK8IP2Q13387 824 aaPredicted RBP13.26□□□□□ -0.29
PSMA6-204ENST00000553809 SCRIBQ14160 1630 aa13.24□□□□□ -0.29
PSMA6-204ENST00000553809 UNC13AQ9UPW8 1703 aa13.23□□□□□ -0.29
PSMA6-204ENST00000553809 DMRT2Q9Y5R5 561 aa13.2□□□□□ -0.3
PSMA6-204ENST00000553809 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
PSMA6-204ENST00000553809 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
PSMA6-204ENST00000553809 SHROOM4Q9ULL8 1493 aa13.05□□□□□ -0.32
PSMA6-204ENST00000553809 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
PSMA6-204ENST00000553809 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
PSMA6-204ENST00000553809 EIF4G1Q04637 1599 aaKnown RBP12.87□□□□□ -0.35
PSMA6-204ENST00000553809 CC2D2AQ9P2K1 1620 aa12.84□□□□□ -0.35
PSMA6-204ENST00000553809 RNF216Q9NWF9 866 aaPredicted RBP12.82□□□□□ -0.36
PSMA6-204ENST00000553809 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
PSMA6-204ENST00000553809 CECR2Q9BXF3 1484 aa12.8□□□□□ -0.36
PSMA6-204ENST00000553809 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
PSMA6-204ENST00000553809 NPM3O75607 178 aaKnown RBP12.66□□□□□ -0.38
PSMA6-204ENST00000553809 KCNA4P22459 653 aa12.65□□□□□ -0.38
PSMA6-204ENST00000553809 SMARCA4P51532 1647 aa12.6□□□□□ -0.39
PSMA6-204ENST00000553809 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
PSMA6-204ENST00000553809 MROH2BQ7Z745 1585 aa12.57□□□□□ -0.4
PSMA6-204ENST00000553809 ATAD2BQ9ULI0 1458 aa12.57□□□□□ -0.4
PSMA6-204ENST00000553809 RSF1Q96T23 1441 aaPredicted RBP12.56□□□□□ -0.4
PSMA6-204ENST00000553809 NCAPD3P42695 1498 aa12.54□□□□□ -0.4
PSMA6-204ENST00000553809 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
PSMA6-204ENST00000553809 BAZ1BQ9UIG0 1483 aaKnown RBP12.48□□□□□ -0.41
PSMA6-204ENST00000553809 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
PSMA6-204ENST00000553809 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.41
PSMA6-204ENST00000553809 PEG3Q9GZU2 1588 aa12.45□□□□□ -0.42
PSMA6-204ENST00000553809 WIZO95785 1651 aa12.45□□□□□ -0.42
PSMA6-204ENST00000553809 DNAJC5Q9H3Z4 198 aa12.34□□□□□ -0.43
PSMA6-204ENST00000553809 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
PSMA6-204ENST00000553809 NESP48681 1621 aa12.31□□□□□ -0.44
PSMA6-204ENST00000553809 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
PSMA6-204ENST00000553809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.45
PSMA6-204ENST00000553809 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
PSMA6-204ENST00000553809 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
PSMA6-204ENST00000553809 CCDC88BA6NC98 1476 aa12.21□□□□□ -0.46
PSMA6-204ENST00000553809 CADPSQ9ULU8 1353 aa12.2□□□□□ -0.46
PSMA6-204ENST00000553809 PDS5BQ9NTI5 1447 aa12.17□□□□□ -0.46
PSMA6-204ENST00000553809 CACNB1Q02641 598 aaPredicted RBP12.16□□□□□ -0.46
PSMA6-204ENST00000553809 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
PSMA6-204ENST00000553809 CUX2O14529 1486 aa12.13□□□□□ -0.47
PSMA6-204ENST00000553809 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
PSMA6-204ENST00000553809 CFTRP13569 1480 aa12.1□□□□□ -0.47
PSMA6-204ENST00000553809 FANCD2Q9BXW9 1451 aa12.08□□□□□ -0.47
PSMA6-204ENST00000553809 THOC2Q8NI27 1593 aaKnown RBP12.08□□□□□ -0.48
PSMA6-204ENST00000553809 CEP164Q9UPV0 1460 aa12.07□□□□□ -0.48
PSMA6-204ENST00000553809 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
PSMA6-204ENST00000553809 MRC2Q9UBG0 1479 aa12.06□□□□□ -0.48
PSMA6-204ENST00000553809 WDR62O43379 1518 aa11.99□□□□□ -0.49
PSMA6-204ENST00000553809 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
PSMA6-204ENST00000553809 U3KPZ7 1027 aaPredicted RBP11.96□□□□□ -0.49
PSMA6-204ENST00000553809 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.5
PSMA6-204ENST00000553809 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
PSMA6-204ENST00000553809 TOPBP1Q92547 1522 aa11.87□□□□□ -0.51
PSMA6-204ENST00000553809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.87□□□□□ -0.51
PSMA6-204ENST00000553809 HNRNPUL2Q1KMD3 747 aaKnown RBP11.87□□□□□ -0.51
PSMA6-204ENST00000553809 APLP2Q06481 763 aa11.84□□□□□ -0.51
PSMA6-204ENST00000553809 DNMBPQ6XZF7 1577 aa11.84□□□□□ -0.51
PSMA6-204ENST00000553809 ABCC8Q09428 1581 aa11.83□□□□□ -0.52
PSMA6-204ENST00000553809 IFT140Q96RY7 1462 aa11.81□□□□□ -0.52
PSMA6-204ENST00000553809 WRNQ14191 1432 aaPredicted RBP eCLIP11.79□□□□□ -0.52
PSMA6-204ENST00000553809 ZNF608Q9ULD9 1512 aaPredicted RBP11.78□□□□□ -0.52
PSMA6-204ENST00000553809 SAMD1Q6SPF0 538 aaPredicted RBP11.78□□□□□ -0.52
PSMA6-204ENST00000553809 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
PSMA6-204ENST00000553809 POLA1P09884 1462 aaPredicted RBP11.77□□□□□ -0.52
PSMA6-204ENST00000553809 MYCNP04198 464 aaPredicted RBP11.77□□□□□ -0.53
PSMA6-204ENST00000553809 CUX1P39880 1505 aa11.76□□□□□ -0.53
PSMA6-204ENST00000553809 SYNJ1O43426 1573 aa11.76□□□□□ -0.53
PSMA6-204ENST00000553809 FGD5Q6ZNL6 1462 aa11.75□□□□□ -0.53
PSMA6-204ENST00000553809 RAD54L2Q9Y4B4 1467 aa11.75□□□□□ -0.53
PSMA6-204ENST00000553809 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
PSMA6-204ENST00000553809 SOGA1O94964 1423 aa11.74□□□□□ -0.53
PSMA6-204ENST00000553809 TOP2BQ02880 1626 aa11.74□□□□□ -0.53
PSMA6-204ENST00000553809 CAPN15O75808 1086 aa11.73□□□□□ -0.53
PSMA6-204ENST00000553809 BIVM-ERCC5R4GMW8 1640 aa11.73□□□□□ -0.53
PSMA6-204ENST00000553809 AQRO60306 1485 aaKnown RBP eCLIP11.71□□□□□ -0.534e-6■■■■□ 25.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms