RNA–Protein interactions for RNA: ENST00000531196.5

FGFR1-236, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-236ENST00000531196 NISCHQ9Y2I1 1504 aa26.98■■□□□ 1.91
FGFR1-236ENST00000531196 CCDC180Q9P1Z9 1646 aa24.16■■□□□ 1.46
FGFR1-236ENST00000531196 ABCC9O60706 1549 aa24.05■■□□□ 1.44
FGFR1-236ENST00000531196 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
FGFR1-236ENST00000531196 NACADO15069 1562 aa22.8■■□□□ 1.24
FGFR1-236ENST00000531196 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
FGFR1-236ENST00000531196 MYO15BQ96JP2 1530 aa22.51■■□□□ 1.19
FGFR1-236ENST00000531196 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
FGFR1-236ENST00000531196 PABPN1Q86U42 306 aaKnown RBP eCLIP22.4■■□□□ 1.184e-6■□□□□ 9.3
FGFR1-236ENST00000531196 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
FGFR1-236ENST00000531196 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
FGFR1-236ENST00000531196 DCAF1Q9Y4B6 1507 aa22.28■■□□□ 1.16
FGFR1-236ENST00000531196 BICRAQ9NZM4 1560 aa22.19■■□□□ 1.14
FGFR1-236ENST00000531196 SCRIBQ14160 1630 aa22.07■■□□□ 1.12
FGFR1-236ENST00000531196 SHROOM4Q9ULL8 1493 aa21.98■■□□□ 1.11
FGFR1-236ENST00000531196 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
FGFR1-236ENST00000531196 CC2D2AQ9P2K1 1620 aa21.69■■□□□ 1.06
FGFR1-236ENST00000531196 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.06
FGFR1-236ENST00000531196 SMARCA4P51532 1647 aa21.03■□□□□ 0.96
FGFR1-236ENST00000531196 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
FGFR1-236ENST00000531196 ATAD2BQ9ULI0 1458 aa21■□□□□ 0.95
FGFR1-236ENST00000531196 SMARCA2P51531 1590 aa20.98■□□□□ 0.95
FGFR1-236ENST00000531196 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
FGFR1-236ENST00000531196 HMGXB3Q12766 1538 aa20.91■□□□□ 0.94
FGFR1-236ENST00000531196 BAZ1BQ9UIG0 1483 aaKnown RBP20.86■□□□□ 0.93
FGFR1-236ENST00000531196 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
FGFR1-236ENST00000531196 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
FGFR1-236ENST00000531196 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
FGFR1-236ENST00000531196 NESP48681 1621 aa20.67■□□□□ 0.9
FGFR1-236ENST00000531196 CUX2O14529 1486 aa20.64■□□□□ 0.89
FGFR1-236ENST00000531196 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
FGFR1-236ENST00000531196 WIZO95785 1651 aa20.54■□□□□ 0.88
FGFR1-236ENST00000531196 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.86
FGFR1-236ENST00000531196 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
FGFR1-236ENST00000531196 CADPSQ9ULU8 1353 aa20.42■□□□□ 0.86
FGFR1-236ENST00000531196 DNAJC5Q9H3Z4 198 aa20.41■□□□□ 0.86
FGFR1-236ENST00000531196 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
FGFR1-236ENST00000531196 KIF21AQ7Z4S6 1674 aa20.4■□□□□ 0.86
FGFR1-236ENST00000531196 TOP2AP11388 1531 aaKnown RBP20.33■□□□□ 0.85
FGFR1-236ENST00000531196 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
FGFR1-236ENST00000531196 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
FGFR1-236ENST00000531196 FANCD2Q9BXW9 1451 aa20.21■□□□□ 0.83
FGFR1-236ENST00000531196 CFTRP13569 1480 aa20.2■□□□□ 0.82
FGFR1-236ENST00000531196 WDR62O43379 1518 aa20.19■□□□□ 0.82
FGFR1-236ENST00000531196 CCDC88BA6NC98 1476 aa20.07■□□□□ 0.8
FGFR1-236ENST00000531196 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
FGFR1-236ENST00000531196 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
FGFR1-236ENST00000531196 TOPBP1Q92547 1522 aa19.83■□□□□ 0.77
FGFR1-236ENST00000531196 IFT140Q96RY7 1462 aa19.82■□□□□ 0.76
FGFR1-236ENST00000531196 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
FGFR1-236ENST00000531196 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
FGFR1-236ENST00000531196 ZNF608Q9ULD9 1512 aaPredicted RBP19.74■□□□□ 0.75
FGFR1-236ENST00000531196 OSCARQ8IYS5 282 aa19.73■□□□□ 0.75
FGFR1-236ENST00000531196 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
FGFR1-236ENST00000531196 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
FGFR1-236ENST00000531196 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
FGFR1-236ENST00000531196 POLA1P09884 1462 aaPredicted RBP19.64■□□□□ 0.73
FGFR1-236ENST00000531196 TARBP1Q13395 1621 aaKnown RBP19.61■□□□□ 0.73
FGFR1-236ENST00000531196 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.72
FGFR1-236ENST00000531196 RAD54L2Q9Y4B4 1467 aa19.56■□□□□ 0.72
FGFR1-236ENST00000531196 SOGA1O94964 1423 aa19.56■□□□□ 0.72
FGFR1-236ENST00000531196 FGD5Q6ZNL6 1462 aa19.55■□□□□ 0.72
FGFR1-236ENST00000531196 CUX1P39880 1505 aa19.52■□□□□ 0.72
FGFR1-236ENST00000531196 TDRD9Q8NDG6 1382 aaKnown RBP19.51■□□□□ 0.71
FGFR1-236ENST00000531196 FBLN2P98095 1184 aa19.49■□□□□ 0.71
FGFR1-236ENST00000531196 CHD1O14646 1710 aa19.47■□□□□ 0.71
FGFR1-236ENST00000531196 WDR97A6NE52 1622 aa19.45■□□□□ 0.7
FGFR1-236ENST00000531196 RIMBP3CA6NJZ7 1639 aa19.44■□□□□ 0.7
FGFR1-236ENST00000531196 RIMBP3BA6NNM3 1639 aa19.44■□□□□ 0.7
FGFR1-236ENST00000531196 RIMBP3Q9UFD9 1639 aa19.44■□□□□ 0.7
FGFR1-236ENST00000531196 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
FGFR1-236ENST00000531196 ARHGEF11O15085 1522 aa19.41■□□□□ 0.7
FGFR1-236ENST00000531196 GRIN2BQ13224 1484 aa19.39■□□□□ 0.69
FGFR1-236ENST00000531196 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
FGFR1-236ENST00000531196 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
FGFR1-236ENST00000531196 GAPVD1Q14C86 1478 aa19.33■□□□□ 0.68
FGFR1-236ENST00000531196 ABCA10Q8WWZ4 1543 aa19.32■□□□□ 0.68
FGFR1-236ENST00000531196 WRNQ14191 1432 aaPredicted RBP eCLIP19.31■□□□□ 0.68
FGFR1-236ENST00000531196 SYNJ2O15056 1496 aa19.3■□□□□ 0.68
FGFR1-236ENST00000531196 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
FGFR1-236ENST00000531196 SYNJ1O43426 1573 aa19.29■□□□□ 0.68
FGFR1-236ENST00000531196 TOP2BQ02880 1626 aa19.27■□□□□ 0.68
FGFR1-236ENST00000531196 ABCA5Q8WWZ7 1642 aa19.27■□□□□ 0.68
FGFR1-236ENST00000531196 CYB5RLQ6IPT4 315 aa19.27■□□□□ 0.68
FGFR1-236ENST00000531196 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
FGFR1-236ENST00000531196 CLASP1Q7Z460 1538 aa19.24■□□□□ 0.67
FGFR1-236ENST00000531196 ARAP1Q96P48 1450 aa19.22■□□□□ 0.67
FGFR1-236ENST00000531196 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
FGFR1-236ENST00000531196 GRIN2AQ12879 1464 aa19.13■□□□□ 0.65
FGFR1-236ENST00000531196 FHAD1B1AJZ9 1412 aa19.09■□□□□ 0.65
FGFR1-236ENST00000531196 ERICH3Q5RHP9 1530 aa19.09■□□□□ 0.65
FGFR1-236ENST00000531196 TRHP20396 242 aaPredicted RBP19.06■□□□□ 0.64
FGFR1-236ENST00000531196 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
FGFR1-236ENST00000531196 NUP160Q12769 1436 aa19.03■□□□□ 0.64
FGFR1-236ENST00000531196 ERCC6L2Q5T890 1561 aa18.94■□□□□ 0.62
FGFR1-236ENST00000531196 KIF27Q86VH2 1401 aa18.94■□□□□ 0.62
FGFR1-236ENST00000531196 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
FGFR1-236ENST00000531196 RUSC2Q8N2Y8 1516 aa18.87■□□□□ 0.61
FGFR1-236ENST00000531196 PRG4Q92954 1404 aaPredicted RBP18.87■□□□□ 0.61
FGFR1-236ENST00000531196 CUL7Q14999 1698 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms