RNA–Protein interactions for RNA: ENST00000461386.5

CEP250-209, Transcript of centrosomal protein 250, humanhuman

TSL 2

Gene CEP250, Length 2,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP250-209ENST00000461386 NISCHQ9Y2I1 1504 aa27.1■■□□□ 1.93
CEP250-209ENST00000461386 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
CEP250-209ENST00000461386 SUPT5HO00267 1087 aaKnown RBP23.19■■□□□ 1.3
CEP250-209ENST00000461386 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
CEP250-209ENST00000461386 CCDC180Q9P1Z9 1646 aa22.81■■□□□ 1.24
CEP250-209ENST00000461386 CHIC1Q5VXU3 224 aa22.71■■□□□ 1.23
CEP250-209ENST00000461386 MYO15BQ96JP2 1530 aa22.7■■□□□ 1.22
CEP250-209ENST00000461386 HRCP23327 699 aa22.67■■□□□ 1.22
CEP250-209ENST00000461386 DCAF8L2P0C7V8 631 aa22.46■■□□□ 1.19
CEP250-209ENST00000461386 PCGF6Q9BYE7 350 aa22.42■■□□□ 1.18
CEP250-209ENST00000461386 DCAF1Q9Y4B6 1507 aa22.2■■□□□ 1.14
CEP250-209ENST00000461386 PPARGC1BQ86YN6 1023 aaKnown RBP22.14■■□□□ 1.14
CEP250-209ENST00000461386 LOC105371045A0A1W2PR82 267 aa22.07■■□□□ 1.12
CEP250-209ENST00000461386 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
CEP250-209ENST00000461386 ABCC9O60706 1549 aa21.76■■□□□ 1.07
CEP250-209ENST00000461386 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
CEP250-209ENST00000461386 ZEB1P37275 1124 aaPredicted RBP21.59■■□□□ 1.05
CEP250-209ENST00000461386 TRIM41Q8WV44 630 aa21.56■■□□□ 1.04
CEP250-209ENST00000461386 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
CEP250-209ENST00000461386 FAM9AQ8IZU1 332 aaPredicted RBP21.43■■□□□ 1.02
CEP250-209ENST00000461386 RB1CC1Q8TDY2 1594 aa21.42■■□□□ 1.02
CEP250-209ENST00000461386 EHMT2Q96KQ7 1210 aa21.25■□□□□ 0.99
CEP250-209ENST00000461386 PELP1Q8IZL8 1130 aaKnown RBP21.17■□□□□ 0.98
CEP250-209ENST00000461386 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.97
CEP250-209ENST00000461386 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
CEP250-209ENST00000461386 MROH2BQ7Z745 1585 aa21.09■□□□□ 0.97
CEP250-209ENST00000461386 NACADO15069 1562 aa21.03■□□□□ 0.96
CEP250-209ENST00000461386 WIZO95785 1651 aa21■□□□□ 0.95
CEP250-209ENST00000461386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.95■□□□□ 0.94
CEP250-209ENST00000461386 CCER1Q8TC90 406 aaPredicted RBP20.93■□□□□ 0.94
CEP250-209ENST00000461386 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.93
CEP250-209ENST00000461386 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
CEP250-209ENST00000461386 ACIN1Q9UKV3 1341 aaKnown RBP20.82■□□□□ 0.92
CEP250-209ENST00000461386 NEUROD1Q13562 356 aa20.74■□□□□ 0.91
CEP250-209ENST00000461386 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
CEP250-209ENST00000461386 DIEXFQ68CQ4 756 aaKnown RBP20.73■□□□□ 0.91
CEP250-209ENST00000461386 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
CEP250-209ENST00000461386 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
CEP250-209ENST00000461386 TTBK1Q5TCY1 1321 aaPredicted RBP20.67■□□□□ 0.9
CEP250-209ENST00000461386 CEP162Q5TB80 1403 aa20.66■□□□□ 0.9
CEP250-209ENST00000461386 TOP2AP11388 1531 aaKnown RBP20.66■□□□□ 0.9
CEP250-209ENST00000461386 CENPBP07199 599 aaPredicted RBP20.65■□□□□ 0.9
CEP250-209ENST00000461386 TNIKQ9UKE5 1360 aa20.61■□□□□ 0.89
CEP250-209ENST00000461386 GTF3C3Q9Y5Q9 886 aa20.58■□□□□ 0.89
CEP250-209ENST00000461386 SOGA1O94964 1423 aa20.58■□□□□ 0.88
CEP250-209ENST00000461386 SMARCA2P51531 1590 aa20.57■□□□□ 0.88
CEP250-209ENST00000461386 SMARCA4P51532 1647 aa20.55■□□□□ 0.88
CEP250-209ENST00000461386 EEA1Q15075 1411 aa20.52■□□□□ 0.88
CEP250-209ENST00000461386 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
CEP250-209ENST00000461386 UBTFP17480 764 aaKnown RBP20.5■□□□□ 0.87
CEP250-209ENST00000461386 ZNF316A6NFI3 1004 aaPredicted RBP20.48■□□□□ 0.87
CEP250-209ENST00000461386 RUSC2Q8N2Y8 1516 aa20.45■□□□□ 0.86
CEP250-209ENST00000461386 GOLGA3Q08378 1498 aa20.41■□□□□ 0.86
CEP250-209ENST00000461386 UNC13AQ9UPW8 1703 aa20.29■□□□□ 0.84
CEP250-209ENST00000461386 MYT1Q01538 1121 aa20.28■□□□□ 0.84
CEP250-209ENST00000461386 HNRNPUL2Q1KMD3 747 aaKnown RBP20.28■□□□□ 0.84
CEP250-209ENST00000461386 YTHDC1Q96MU7 727 aaKnown RBP20.28■□□□□ 0.84
CEP250-209ENST00000461386 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
CEP250-209ENST00000461386 MIER1Q8N108 512 aa20.23■□□□□ 0.83
CEP250-209ENST00000461386 CLIP1P30622 1438 aa20.21■□□□□ 0.83
CEP250-209ENST00000461386 KIF21BO75037 1637 aa20.21■□□□□ 0.83
CEP250-209ENST00000461386 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
CEP250-209ENST00000461386 VPS8Q8N3P4 1428 aa20.16■□□□□ 0.82
CEP250-209ENST00000461386 APLP2Q06481 763 aa20.14■□□□□ 0.81
CEP250-209ENST00000461386 PEG3Q9GZU2 1588 aa20.11■□□□□ 0.81
CEP250-209ENST00000461386 PABPN1Q86U42 306 aaKnown RBP eCLIP20.1■□□□□ 0.814e-6■□□□□ 9.3
CEP250-209ENST00000461386 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
CEP250-209ENST00000461386 RAPGEF2Q9Y4G8 1499 aa20.05■□□□□ 0.8
CEP250-209ENST00000461386 BICRAQ9NZM4 1560 aa20.04■□□□□ 0.8
CEP250-209ENST00000461386 RANGAP1P46060 587 aaPredicted RBP20.01■□□□□ 0.79
CEP250-209ENST00000461386 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
CEP250-209ENST00000461386 CLSPNQ9HAW4 1339 aa19.94■□□□□ 0.78
CEP250-209ENST00000461386 DHX57Q6P158 1386 aaKnown RBP19.9■□□□□ 0.78
CEP250-209ENST00000461386 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
CEP250-209ENST00000461386 ERICH3Q5RHP9 1530 aa19.82■□□□□ 0.76
CEP250-209ENST00000461386 ARAP1Q96P48 1450 aa19.82■□□□□ 0.76
CEP250-209ENST00000461386 KANK4Q5T7N3 995 aaPredicted RBP19.8■□□□□ 0.76
CEP250-209ENST00000461386 PRXQ9BXM0 1461 aa19.8■□□□□ 0.76
CEP250-209ENST00000461386 BIVM-ERCC5R4GMW8 1640 aa19.78■□□□□ 0.76
CEP250-209ENST00000461386 RRBP1Q9P2E9 1410 aaKnown RBP19.74■□□□□ 0.75
CEP250-209ENST00000461386 SUPT16HQ9Y5B9 1047 aaKnown RBP19.73■□□□□ 0.75
CEP250-209ENST00000461386 CUX2O14529 1486 aa19.68■□□□□ 0.74
CEP250-209ENST00000461386 CCNB3Q8WWL7 1395 aa19.65■□□□□ 0.74
CEP250-209ENST00000461386 KIF27Q86VH2 1401 aa19.64■□□□□ 0.73
CEP250-209ENST00000461386 CUX1P39880 1505 aa19.61■□□□□ 0.73
CEP250-209ENST00000461386 ITGAEP38570 1179 aa19.6■□□□□ 0.73
CEP250-209ENST00000461386 ARHGAP35Q9NRY4 1499 aa19.59■□□□□ 0.73
CEP250-209ENST00000461386 RAB3GAP2Q9H2M9 1393 aa19.53■□□□□ 0.72
CEP250-209ENST00000461386 TSHZ2Q9NRE2 1034 aa19.51■□□□□ 0.71
CEP250-209ENST00000461386 MAPKBP1O60336 1514 aa19.49■□□□□ 0.71
CEP250-209ENST00000461386 KCNH8Q96L42 1107 aa19.49■□□□□ 0.71
CEP250-209ENST00000461386 HMGXB3Q12766 1538 aa19.49■□□□□ 0.71
CEP250-209ENST00000461386 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
CEP250-209ENST00000461386 SETD5Q9C0A6 1442 aa19.44■□□□□ 0.7
CEP250-209ENST00000461386 CFTRP13569 1480 aa19.44■□□□□ 0.7
CEP250-209ENST00000461386 TIAM1Q13009 1591 aa19.44■□□□□ 0.7
CEP250-209ENST00000461386 MAP3K1Q13233 1512 aa19.43■□□□□ 0.7
CEP250-209ENST00000461386 IGF1RP08069 1367 aa19.39■□□□□ 0.69
CEP250-209ENST00000461386 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
CEP250-209ENST00000461386 LRRC9Q6ZRR7 1453 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms