RNA–Protein interactions for RNA: ENST00000622405.4

PSMA6-215, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2 BASIC

Gene PSMA6, Length 978 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-215ENST00000622405 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.89
PSMA6-215ENST00000622405 CCDC180Q9P1Z9 1646 aa29.64■■■□□ 2.34
PSMA6-215ENST00000622405 ABCC9O60706 1549 aa29.06■■■□□ 2.24
PSMA6-215ENST00000622405 RB1CC1Q8TDY2 1594 aa27.96■■■□□ 2.07
PSMA6-215ENST00000622405 NACADO15069 1562 aa27.87■■■□□ 2.05
PSMA6-215ENST00000622405 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
PSMA6-215ENST00000622405 DCAF8L2P0C7V8 631 aa27.57■■■□□ 2
PSMA6-215ENST00000622405 ZCCHC6Q5VYS8 1495 aaKnown RBP27.51■■■□□ 2
PSMA6-215ENST00000622405 DCAF1Q9Y4B6 1507 aa27.43■■□□□ 1.98
PSMA6-215ENST00000622405 UNC13AQ9UPW8 1703 aa27.36■■□□□ 1.97
PSMA6-215ENST00000622405 BICRAQ9NZM4 1560 aa27.08■■□□□ 1.93
PSMA6-215ENST00000622405 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.924e-6■□□□□ 9.3
PSMA6-215ENST00000622405 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
PSMA6-215ENST00000622405 SCRIBQ14160 1630 aa26.89■■□□□ 1.9
PSMA6-215ENST00000622405 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
PSMA6-215ENST00000622405 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
PSMA6-215ENST00000622405 CHIC1Q5VXU3 224 aa26.46■■□□□ 1.83
PSMA6-215ENST00000622405 EIF4G1Q04637 1599 aaKnown RBP26.4■■□□□ 1.82
PSMA6-215ENST00000622405 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
PSMA6-215ENST00000622405 CECR2Q9BXF3 1484 aa26.17■■□□□ 1.78
PSMA6-215ENST00000622405 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
PSMA6-215ENST00000622405 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
PSMA6-215ENST00000622405 NCAPD3P42695 1498 aa25.67■■□□□ 1.7
PSMA6-215ENST00000622405 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
PSMA6-215ENST00000622405 ATAD2BQ9ULI0 1458 aa25.63■■□□□ 1.69
PSMA6-215ENST00000622405 HMGXB3Q12766 1538 aa25.58■■□□□ 1.69
PSMA6-215ENST00000622405 PEG3Q9GZU2 1588 aa25.54■■□□□ 1.68
PSMA6-215ENST00000622405 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
PSMA6-215ENST00000622405 BAZ1BQ9UIG0 1483 aaKnown RBP25.41■■□□□ 1.66
PSMA6-215ENST00000622405 WIZO95785 1651 aa25.18■■□□□ 1.62
PSMA6-215ENST00000622405 ERCC6Q03468 1493 aa25.11■■□□□ 1.61
PSMA6-215ENST00000622405 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
PSMA6-215ENST00000622405 NESP48681 1621 aa25.06■■□□□ 1.6
PSMA6-215ENST00000622405 RSF1Q96T23 1441 aaPredicted RBP25.05■■□□□ 1.6
PSMA6-215ENST00000622405 CUX2O14529 1486 aa25.01■■□□□ 1.59
PSMA6-215ENST00000622405 TOP2AP11388 1531 aaKnown RBP24.94■■□□□ 1.58
PSMA6-215ENST00000622405 PDS5BQ9NTI5 1447 aa24.88■■□□□ 1.57
PSMA6-215ENST00000622405 CADPSQ9ULU8 1353 aa24.88■■□□□ 1.57
PSMA6-215ENST00000622405 KIF21AQ7Z4S6 1674 aa24.87■■□□□ 1.57
PSMA6-215ENST00000622405 THOC2Q8NI27 1593 aaKnown RBP24.85■■□□□ 1.57
PSMA6-215ENST00000622405 CFTRP13569 1480 aa24.7■■□□□ 1.55
PSMA6-215ENST00000622405 PRDM2Q13029 1718 aa24.64■■□□□ 1.54
PSMA6-215ENST00000622405 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.53
PSMA6-215ENST00000622405 CEP164Q9UPV0 1460 aa24.63■■□□□ 1.53
PSMA6-215ENST00000622405 FANCD2Q9BXW9 1451 aa24.6■■□□□ 1.53
PSMA6-215ENST00000622405 WDR62O43379 1518 aa24.6■■□□□ 1.53
PSMA6-215ENST00000622405 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.52
PSMA6-215ENST00000622405 DNAJC5Q9H3Z4 198 aa24.43■■□□□ 1.5
PSMA6-215ENST00000622405 URB2Q14146 1524 aaKnown RBP24.36■■□□□ 1.49
PSMA6-215ENST00000622405 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
PSMA6-215ENST00000622405 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
PSMA6-215ENST00000622405 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
PSMA6-215ENST00000622405 DNMBPQ6XZF7 1577 aa24.18■■□□□ 1.46
PSMA6-215ENST00000622405 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
PSMA6-215ENST00000622405 TARBP1Q13395 1621 aaKnown RBP23.98■■□□□ 1.43
PSMA6-215ENST00000622405 POLA1P09884 1462 aaPredicted RBP23.97■■□□□ 1.43
PSMA6-215ENST00000622405 ZNF608Q9ULD9 1512 aaPredicted RBP23.96■■□□□ 1.43
PSMA6-215ENST00000622405 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.42
PSMA6-215ENST00000622405 CUX1P39880 1505 aa23.89■■□□□ 1.42
PSMA6-215ENST00000622405 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
PSMA6-215ENST00000622405 FGD5Q6ZNL6 1462 aa23.86■■□□□ 1.41
PSMA6-215ENST00000622405 SOGA1O94964 1423 aa23.83■■□□□ 1.4
PSMA6-215ENST00000622405 OSCARQ8IYS5 282 aa23.82■■□□□ 1.4
PSMA6-215ENST00000622405 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
PSMA6-215ENST00000622405 AQRO60306 1485 aaKnown RBP eCLIP23.78■■□□□ 1.44e-6■■■■□ 25.5
PSMA6-215ENST00000622405 CHD1O14646 1710 aa23.71■■□□□ 1.39
PSMA6-215ENST00000622405 BIVM-ERCC5R4GMW8 1640 aa23.71■■□□□ 1.39
PSMA6-215ENST00000622405 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
PSMA6-215ENST00000622405 TOP2BQ02880 1626 aa23.68■■□□□ 1.38
PSMA6-215ENST00000622405 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
PSMA6-215ENST00000622405 WRNQ14191 1432 aaPredicted RBP eCLIP23.65■■□□□ 1.38
PSMA6-215ENST00000622405 GRIN2BQ13224 1484 aa23.63■■□□□ 1.37
PSMA6-215ENST00000622405 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
PSMA6-215ENST00000622405 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
PSMA6-215ENST00000622405 ABCA5Q8WWZ7 1642 aa23.61■■□□□ 1.37
PSMA6-215ENST00000622405 SNAPC4Q5SXM2 1469 aa23.61■■□□□ 1.37
PSMA6-215ENST00000622405 SYNJ1O43426 1573 aa23.61■■□□□ 1.37
PSMA6-215ENST00000622405 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
PSMA6-215ENST00000622405 RIMBP3CA6NJZ7 1639 aa23.53■■□□□ 1.36
PSMA6-215ENST00000622405 RIMBP3BA6NNM3 1639 aa23.53■■□□□ 1.36
PSMA6-215ENST00000622405 RIMBP3Q9UFD9 1639 aa23.53■■□□□ 1.36
PSMA6-215ENST00000622405 SYNJ2O15056 1496 aa23.51■■□□□ 1.35
PSMA6-215ENST00000622405 FBLN2P98095 1184 aa23.51■■□□□ 1.35
PSMA6-215ENST00000622405 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
PSMA6-215ENST00000622405 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
PSMA6-215ENST00000622405 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
PSMA6-215ENST00000622405 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
PSMA6-215ENST00000622405 ERICH3Q5RHP9 1530 aa23.39■■□□□ 1.34
PSMA6-215ENST00000622405 ADAMTS12P58397 1594 aa23.39■■□□□ 1.33
PSMA6-215ENST00000622405 GRIN2AQ12879 1464 aa23.32■■□□□ 1.32
PSMA6-215ENST00000622405 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
PSMA6-215ENST00000622405 ARAP1Q96P48 1450 aa23.26■■□□□ 1.31
PSMA6-215ENST00000622405 NUP160Q12769 1436 aa23.24■■□□□ 1.31
PSMA6-215ENST00000622405 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
PSMA6-215ENST00000622405 CEP170Q5SW79 1584 aa23.21■■□□□ 1.31
PSMA6-215ENST00000622405 KIF27Q86VH2 1401 aa23.19■■□□□ 1.3
PSMA6-215ENST00000622405 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
PSMA6-215ENST00000622405 CUL7Q14999 1698 aa23.16■■□□□ 1.3
PSMA6-215ENST00000622405 SHROOM2Q13796 1616 aa23.13■■□□□ 1.29
PSMA6-215ENST00000622405 IGF1RP08069 1367 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms