RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-222ENST00000487647 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
FGFR1-222ENST00000487647 CCDC180Q9P1Z9 1646 aa29.06■■■□□ 2.24
FGFR1-222ENST00000487647 ZCCHC6Q5VYS8 1495 aaKnown RBP27.99■■■□□ 2.07
FGFR1-222ENST00000487647 DCAF1Q9Y4B6 1507 aa27.65■■■□□ 2.02
FGFR1-222ENST00000487647 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
FGFR1-222ENST00000487647 ABCC9O60706 1549 aa27.43■■□□□ 1.98
FGFR1-222ENST00000487647 MYO15BQ96JP2 1530 aa27.37■■□□□ 1.97
FGFR1-222ENST00000487647 NACADO15069 1562 aa27.13■■□□□ 1.93
FGFR1-222ENST00000487647 SHROOM4Q9ULL8 1493 aa27.03■■□□□ 1.92
FGFR1-222ENST00000487647 RB1CC1Q8TDY2 1594 aa26.86■■□□□ 1.89
FGFR1-222ENST00000487647 SCRIBQ14160 1630 aa26.62■■□□□ 1.85
FGFR1-222ENST00000487647 UNC13AQ9UPW8 1703 aa26.13■■□□□ 1.77
FGFR1-222ENST00000487647 SUPT5HO00267 1087 aaKnown RBP26.07■■□□□ 1.76
FGFR1-222ENST00000487647 BICRAQ9NZM4 1560 aa25.97■■□□□ 1.75
FGFR1-222ENST00000487647 PABPN1Q86U42 306 aaKnown RBP eCLIP25.87■■□□□ 1.734e-6■□□□□ 9.3
FGFR1-222ENST00000487647 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
FGFR1-222ENST00000487647 CECR2Q9BXF3 1484 aa25.83■■□□□ 1.73
FGFR1-222ENST00000487647 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
FGFR1-222ENST00000487647 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
FGFR1-222ENST00000487647 SMARCA4P51532 1647 aa25.57■■□□□ 1.68
FGFR1-222ENST00000487647 WIZO95785 1651 aa25.42■■□□□ 1.66
FGFR1-222ENST00000487647 PEG3Q9GZU2 1588 aa25.35■■□□□ 1.65
FGFR1-222ENST00000487647 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
FGFR1-222ENST00000487647 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
FGFR1-222ENST00000487647 EIF4G1Q04637 1599 aaKnown RBP25.23■■□□□ 1.63
FGFR1-222ENST00000487647 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
FGFR1-222ENST00000487647 BAZ1BQ9UIG0 1483 aaKnown RBP25.07■■□□□ 1.6
FGFR1-222ENST00000487647 NCAPD3P42695 1498 aa25.05■■□□□ 1.6
FGFR1-222ENST00000487647 CHIC1Q5VXU3 224 aa25.01■■□□□ 1.59
FGFR1-222ENST00000487647 CCDC88BA6NC98 1476 aa25■■□□□ 1.59
FGFR1-222ENST00000487647 HMGXB3Q12766 1538 aa24.99■■□□□ 1.59
FGFR1-222ENST00000487647 CC2D2AQ9P2K1 1620 aa24.83■■□□□ 1.57
FGFR1-222ENST00000487647 TRIM41Q8WV44 630 aa24.61■■□□□ 1.53
FGFR1-222ENST00000487647 CFTRP13569 1480 aa24.47■■□□□ 1.51
FGFR1-222ENST00000487647 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
FGFR1-222ENST00000487647 ABCC8Q09428 1581 aa24.36■■□□□ 1.49
FGFR1-222ENST00000487647 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
FGFR1-222ENST00000487647 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
FGFR1-222ENST00000487647 DNAJC5BQ9UF47 199 aa24.19■■□□□ 1.46
FGFR1-222ENST00000487647 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
FGFR1-222ENST00000487647 SYNJ1O43426 1573 aa24.15■■□□□ 1.46
FGFR1-222ENST00000487647 TOP2BQ02880 1626 aa24.11■■□□□ 1.45
FGFR1-222ENST00000487647 EEA1Q15075 1411 aa24.08■■□□□ 1.45
FGFR1-222ENST00000487647 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.44
FGFR1-222ENST00000487647 BIVM-ERCC5R4GMW8 1640 aa24.06■■□□□ 1.44
FGFR1-222ENST00000487647 NESP48681 1621 aa24.04■■□□□ 1.44
FGFR1-222ENST00000487647 PDS5BQ9NTI5 1447 aa24.03■■□□□ 1.44
FGFR1-222ENST00000487647 FAM9AQ8IZU1 332 aaPredicted RBP24.02■■□□□ 1.44
FGFR1-222ENST00000487647 CUX1P39880 1505 aa24.02■■□□□ 1.44
FGFR1-222ENST00000487647 LOC105371045A0A1W2PR82 267 aa23.97■■□□□ 1.43
FGFR1-222ENST00000487647 SOGA1O94964 1423 aa23.97■■□□□ 1.43
FGFR1-222ENST00000487647 CEP164Q9UPV0 1460 aa23.93■■□□□ 1.42
FGFR1-222ENST00000487647 CSRNP3Q8WYN3 585 aa23.9■■□□□ 1.42
FGFR1-222ENST00000487647 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
FGFR1-222ENST00000487647 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
FGFR1-222ENST00000487647 TOPBP1Q92547 1522 aa23.81■■□□□ 1.4
FGFR1-222ENST00000487647 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
FGFR1-222ENST00000487647 KIF27Q86VH2 1401 aa23.76■■□□□ 1.39
FGFR1-222ENST00000487647 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
FGFR1-222ENST00000487647 KIF21AQ7Z4S6 1674 aa23.72■■□□□ 1.39
FGFR1-222ENST00000487647 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
FGFR1-222ENST00000487647 MRC2Q9UBG0 1479 aa23.67■■□□□ 1.38
FGFR1-222ENST00000487647 GOLGA3Q08378 1498 aa23.66■■□□□ 1.38
FGFR1-222ENST00000487647 KIF21BO75037 1637 aa23.65■■□□□ 1.38
FGFR1-222ENST00000487647 CUX2O14529 1486 aa23.64■■□□□ 1.38
FGFR1-222ENST00000487647 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
FGFR1-222ENST00000487647 TNIKQ9UKE5 1360 aa23.62■■□□□ 1.37
FGFR1-222ENST00000487647 EHMT2Q96KQ7 1210 aa23.59■■□□□ 1.37
FGFR1-222ENST00000487647 PRXQ9BXM0 1461 aa23.58■■□□□ 1.37
FGFR1-222ENST00000487647 ERCC6Q03468 1493 aa23.58■■□□□ 1.36
FGFR1-222ENST00000487647 RAD54L2Q9Y4B4 1467 aa23.57■■□□□ 1.36
FGFR1-222ENST00000487647 IGF1RP08069 1367 aa23.54■■□□□ 1.36
FGFR1-222ENST00000487647 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
FGFR1-222ENST00000487647 UBTFP17480 764 aaKnown RBP23.54■■□□□ 1.36
FGFR1-222ENST00000487647 WDR62O43379 1518 aa23.53■■□□□ 1.36
FGFR1-222ENST00000487647 RAPGEF2Q9Y4G8 1499 aa23.49■■□□□ 1.35
FGFR1-222ENST00000487647 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
FGFR1-222ENST00000487647 CARMIL1Q5VZK9 1371 aa23.42■■□□□ 1.34
FGFR1-222ENST00000487647 CEP162Q5TB80 1403 aa23.42■■□□□ 1.34
FGFR1-222ENST00000487647 TARBP1Q13395 1621 aaKnown RBP23.42■■□□□ 1.34
FGFR1-222ENST00000487647 IFT140Q96RY7 1462 aa23.41■■□□□ 1.34
FGFR1-222ENST00000487647 THOC2Q8NI27 1593 aaKnown RBP23.39■■□□□ 1.34
FGFR1-222ENST00000487647 GAPVD1Q14C86 1478 aa23.37■■□□□ 1.33
FGFR1-222ENST00000487647 TDRD9Q8NDG6 1382 aaKnown RBP23.37■■□□□ 1.33
FGFR1-222ENST00000487647 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
FGFR1-222ENST00000487647 CUL7Q14999 1698 aa23.32■■□□□ 1.32
FGFR1-222ENST00000487647 CLIP1P30622 1438 aa23.27■■□□□ 1.31
FGFR1-222ENST00000487647 GRIN2BQ13224 1484 aa23.22■■□□□ 1.31
FGFR1-222ENST00000487647 AQRO60306 1485 aaKnown RBP eCLIP23.22■■□□□ 1.31
FGFR1-222ENST00000487647 ZNF608Q9ULD9 1512 aaPredicted RBP23.17■■□□□ 1.3
FGFR1-222ENST00000487647 FHAD1B1AJZ9 1412 aa23.16■■□□□ 1.3
FGFR1-222ENST00000487647 PBRM1Q86U86 1689 aa23.13■■□□□ 1.29
FGFR1-222ENST00000487647 EIF4G3O43432 1585 aaKnown RBP23.08■■□□□ 1.29
FGFR1-222ENST00000487647 ADAMTS12P58397 1594 aa23.07■■□□□ 1.28
FGFR1-222ENST00000487647 VPS8Q8N3P4 1428 aa23.07■■□□□ 1.28
FGFR1-222ENST00000487647 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
FGFR1-222ENST00000487647 RANGAP1P46060 587 aaPredicted RBP23.04■■□□□ 1.28
FGFR1-222ENST00000487647 ARHGAP35Q9NRY4 1499 aa23.01■■□□□ 1.27
FGFR1-222ENST00000487647 SNAPC4Q5SXM2 1469 aa23■■□□□ 1.27
FGFR1-222ENST00000487647 ARAP1Q96P48 1450 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms