RNA–Protein interactions for RNA: ENST00000427971.6

ARAP1-206, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 5

Gene ARAP1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-206ENST00000427971 NISCHQ9Y2I1 1504 aa33.19■■■□□ 2.9
ARAP1-206ENST00000427971 ABCC9O60706 1549 aa30.19■■■□□ 2.42
ARAP1-206ENST00000427971 CCDC180Q9P1Z9 1646 aa29.89■■■□□ 2.38
ARAP1-206ENST00000427971 RB1CC1Q8TDY2 1594 aa28.62■■■□□ 2.17
ARAP1-206ENST00000427971 DNAJC5BQ9UF47 199 aa28.62■■■□□ 2.17
ARAP1-206ENST00000427971 NACADO15069 1562 aa28.37■■■□□ 2.13
ARAP1-206ENST00000427971 DCAF8L2P0C7V8 631 aa28.17■■■□□ 2.1
ARAP1-206ENST00000427971 PABPN1Q86U42 306 aaKnown RBP eCLIP28.08■■■□□ 2.093e-6■□□□□ 9.3
ARAP1-206ENST00000427971 UNC13AQ9UPW8 1703 aa27.91■■■□□ 2.06
ARAP1-206ENST00000427971 MYO15BQ96JP2 1530 aa27.9■■■□□ 2.06
ARAP1-206ENST00000427971 BICRAQ9NZM4 1560 aa27.78■■■□□ 2.04
ARAP1-206ENST00000427971 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
ARAP1-206ENST00000427971 ZCCHC6Q5VYS8 1495 aaKnown RBP27.42■■□□□ 1.98
ARAP1-206ENST00000427971 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
ARAP1-206ENST00000427971 CC2D2AQ9P2K1 1620 aa27.26■■□□□ 1.95
ARAP1-206ENST00000427971 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
ARAP1-206ENST00000427971 SCRIBQ14160 1630 aa27.19■■□□□ 1.94
ARAP1-206ENST00000427971 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.93
ARAP1-206ENST00000427971 DNAJC5Q9H3Z4 198 aa26.55■■□□□ 1.84
ARAP1-206ENST00000427971 NCAPD3P42695 1498 aa26.21■■□□□ 1.79
ARAP1-206ENST00000427971 CUX2O14529 1486 aa26.18■■□□□ 1.78
ARAP1-206ENST00000427971 ERCC6Q03468 1493 aa26.11■■□□□ 1.77
ARAP1-206ENST00000427971 ATAD2BQ9ULI0 1458 aa26.06■■□□□ 1.76
ARAP1-206ENST00000427971 SMARCA2P51531 1590 aa25.98■■□□□ 1.75
ARAP1-206ENST00000427971 HMGXB3Q12766 1538 aa25.96■■□□□ 1.75
ARAP1-206ENST00000427971 SMARCA4P51532 1647 aa25.93■■□□□ 1.74
ARAP1-206ENST00000427971 NESP48681 1621 aa25.84■■□□□ 1.73
ARAP1-206ENST00000427971 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
ARAP1-206ENST00000427971 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
ARAP1-206ENST00000427971 PEG3Q9GZU2 1588 aa25.71■■□□□ 1.71
ARAP1-206ENST00000427971 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
ARAP1-206ENST00000427971 THOC2Q8NI27 1593 aaKnown RBP25.64■■□□□ 1.69
ARAP1-206ENST00000427971 MROH2BQ7Z745 1585 aa25.55■■□□□ 1.68
ARAP1-206ENST00000427971 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
ARAP1-206ENST00000427971 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
ARAP1-206ENST00000427971 CADPSQ9ULU8 1353 aa25.4■■□□□ 1.66
ARAP1-206ENST00000427971 MRC2Q9UBG0 1479 aa25.29■■□□□ 1.64
ARAP1-206ENST00000427971 WDR62O43379 1518 aa25.24■■□□□ 1.63
ARAP1-206ENST00000427971 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
ARAP1-206ENST00000427971 WIZO95785 1651 aa25.21■■□□□ 1.63
ARAP1-206ENST00000427971 CEP164Q9UPV0 1460 aa25.14■■□□□ 1.61
ARAP1-206ENST00000427971 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.6
ARAP1-206ENST00000427971 CFTRP13569 1480 aa25.03■■□□□ 1.6
ARAP1-206ENST00000427971 OSCARQ8IYS5 282 aa24.98■■□□□ 1.59
ARAP1-206ENST00000427971 RSF1Q96T23 1441 aaPredicted RBP24.93■■□□□ 1.58
ARAP1-206ENST00000427971 TOP2AP11388 1531 aaKnown RBP24.88■■□□□ 1.57
ARAP1-206ENST00000427971 URB2Q14146 1524 aaKnown RBP24.88■■□□□ 1.57
ARAP1-206ENST00000427971 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
ARAP1-206ENST00000427971 IFT140Q96RY7 1462 aa24.65■■□□□ 1.54
ARAP1-206ENST00000427971 CCDC88BA6NC98 1476 aa24.63■■□□□ 1.53
ARAP1-206ENST00000427971 ZNF608Q9ULD9 1512 aaPredicted RBP24.62■■□□□ 1.53
ARAP1-206ENST00000427971 RIMBP3CA6NJZ7 1639 aa24.61■■□□□ 1.53
ARAP1-206ENST00000427971 RIMBP3BA6NNM3 1639 aa24.61■■□□□ 1.53
ARAP1-206ENST00000427971 RIMBP3Q9UFD9 1639 aa24.61■■□□□ 1.53
ARAP1-206ENST00000427971 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
ARAP1-206ENST00000427971 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
ARAP1-206ENST00000427971 ARHGEF11O15085 1522 aa24.51■■□□□ 1.51
ARAP1-206ENST00000427971 EIF4G3O43432 1585 aaKnown RBP24.46■■□□□ 1.51
ARAP1-206ENST00000427971 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.5
ARAP1-206ENST00000427971 CYB5RLQ6IPT4 315 aa24.39■■□□□ 1.49
ARAP1-206ENST00000427971 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.495e-8■■■■□ 26.6
ARAP1-206ENST00000427971 TARBP1Q13395 1621 aaKnown RBP24.36■■□□□ 1.49
ARAP1-206ENST00000427971 CHD1O14646 1710 aa24.31■■□□□ 1.48
ARAP1-206ENST00000427971 FBLN2P98095 1184 aa24.3■■□□□ 1.48
ARAP1-206ENST00000427971 POLA1P09884 1462 aaPredicted RBP24.3■■□□□ 1.48
ARAP1-206ENST00000427971 ARAP1Q96P48 1450 aa24.24■■□□□ 1.47
ARAP1-206ENST00000427971 TRHP20396 242 aaPredicted RBP24.22■■□□□ 1.47
ARAP1-206ENST00000427971 RAD54L2Q9Y4B4 1467 aa24.2■■□□□ 1.47
ARAP1-206ENST00000427971 SOGA1O94964 1423 aa24.2■■□□□ 1.46
ARAP1-206ENST00000427971 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
ARAP1-206ENST00000427971 WDR97A6NE52 1622 aa24.13■■□□□ 1.45
ARAP1-206ENST00000427971 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
ARAP1-206ENST00000427971 FGD5Q6ZNL6 1462 aa24.09■■□□□ 1.45
ARAP1-206ENST00000427971 CHMP7Q8WUX9 453 aaPredicted RBP24.09■■□□□ 1.45
ARAP1-206ENST00000427971 CLASP1Q7Z460 1538 aa24.06■■□□□ 1.44
ARAP1-206ENST00000427971 MAGI1Q96QZ7 1491 aaPredicted RBP24.06■■□□□ 1.44
ARAP1-206ENST00000427971 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
ARAP1-206ENST00000427971 GRIN2BQ13224 1484 aa24.02■■□□□ 1.44
ARAP1-206ENST00000427971 CUX1P39880 1505 aa24.02■■□□□ 1.44
ARAP1-206ENST00000427971 SYNJ2O15056 1496 aa23.98■■□□□ 1.43
ARAP1-206ENST00000427971 GAPVD1Q14C86 1478 aa23.9■■□□□ 1.42
ARAP1-206ENST00000427971 PBRM1Q86U86 1689 aa23.86■■□□□ 1.41
ARAP1-206ENST00000427971 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
ARAP1-206ENST00000427971 ABCA5Q8WWZ7 1642 aa23.78■■□□□ 1.4
ARAP1-206ENST00000427971 AEBP2Q6ZN18 517 aaPredicted RBP23.75■■□□□ 1.39
ARAP1-206ENST00000427971 GRIN2AQ12879 1464 aa23.7■■□□□ 1.38
ARAP1-206ENST00000427971 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
ARAP1-206ENST00000427971 NUP160Q12769 1436 aa23.64■■□□□ 1.37
ARAP1-206ENST00000427971 ERCC6L2Q5T890 1561 aa23.64■■□□□ 1.37
ARAP1-206ENST00000427971 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
ARAP1-206ENST00000427971 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
ARAP1-206ENST00000427971 SUPT5HO00267 1087 aaKnown RBP23.59■■□□□ 1.37
ARAP1-206ENST00000427971 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
ARAP1-206ENST00000427971 TOP2BQ02880 1626 aa23.56■■□□□ 1.36
ARAP1-206ENST00000427971 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
ARAP1-206ENST00000427971 BIVM-ERCC5R4GMW8 1640 aa23.55■■□□□ 1.36
ARAP1-206ENST00000427971 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
ARAP1-206ENST00000427971 PRG4Q92954 1404 aaPredicted RBP23.44■■□□□ 1.34
ARAP1-206ENST00000427971 JPH4Q96JJ6 628 aa23.44■■□□□ 1.34
ARAP1-206ENST00000427971 KIF13AQ9H1H9 1805 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms