RNA–Protein interactions for RNA: ENST00000491465.5

DCTN1-221, Transcript of dynactin subunit 1, humanhuman

TSL 1 (best)

Gene DCTN1, Length 2,444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN1-221ENST00000491465 NISCHQ9Y2I1 1504 aa30.12■■■□□ 2.41
DCTN1-221ENST00000491465 SHROOM4Q9ULL8 1493 aa25.97■■□□□ 1.75
DCTN1-221ENST00000491465 SUPT5HO00267 1087 aaKnown RBP25.65■■□□□ 1.7
DCTN1-221ENST00000491465 ZCCHC6Q5VYS8 1495 aaKnown RBP25.51■■□□□ 1.67
DCTN1-221ENST00000491465 CCDC180Q9P1Z9 1646 aa25.35■■□□□ 1.65
DCTN1-221ENST00000491465 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
DCTN1-221ENST00000491465 DCAF8L2P0C7V8 631 aa25.06■■□□□ 1.6
DCTN1-221ENST00000491465 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
DCTN1-221ENST00000491465 HRCP23327 699 aa24.77■■□□□ 1.56
DCTN1-221ENST00000491465 DCAF1Q9Y4B6 1507 aa24.67■■□□□ 1.54
DCTN1-221ENST00000491465 PCGF6Q9BYE7 350 aa24.6■■□□□ 1.53
DCTN1-221ENST00000491465 LOC105371045A0A1W2PR82 267 aa24.37■■□□□ 1.49
DCTN1-221ENST00000491465 PPARGC1BQ86YN6 1023 aaKnown RBP24.22■■□□□ 1.47
DCTN1-221ENST00000491465 ABCC9O60706 1549 aa24.08■■□□□ 1.44
DCTN1-221ENST00000491465 TRIM26Q12899 539 aaPredicted RBP24.04■■□□□ 1.44
DCTN1-221ENST00000491465 RSF1Q96T23 1441 aaPredicted RBP24■■□□□ 1.43
DCTN1-221ENST00000491465 SCRIBQ14160 1630 aa23.89■■□□□ 1.41
DCTN1-221ENST00000491465 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
DCTN1-221ENST00000491465 RB1CC1Q8TDY2 1594 aa23.7■■□□□ 1.39
DCTN1-221ENST00000491465 FAM9AQ8IZU1 332 aaPredicted RBP23.7■■□□□ 1.38
DCTN1-221ENST00000491465 ZEB1P37275 1124 aaPredicted RBP23.63■■□□□ 1.37
DCTN1-221ENST00000491465 CECR2Q9BXF3 1484 aa23.52■■□□□ 1.36
DCTN1-221ENST00000491465 EHMT2Q96KQ7 1210 aa23.5■■□□□ 1.35
DCTN1-221ENST00000491465 NACADO15069 1562 aa23.45■■□□□ 1.34
DCTN1-221ENST00000491465 MROH2BQ7Z745 1585 aa23.44■■□□□ 1.34
DCTN1-221ENST00000491465 WIZO95785 1651 aa23.29■■□□□ 1.32
DCTN1-221ENST00000491465 BAZ1AQ9NRL2 1556 aaPredicted RBP23.13■■□□□ 1.29
DCTN1-221ENST00000491465 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
DCTN1-221ENST00000491465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.04■■□□□ 1.28
DCTN1-221ENST00000491465 SCAF1Q9H7N4 1312 aaKnown RBP22.99■■□□□ 1.27
DCTN1-221ENST00000491465 CCER1Q8TC90 406 aaPredicted RBP22.99■■□□□ 1.27
DCTN1-221ENST00000491465 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
DCTN1-221ENST00000491465 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
DCTN1-221ENST00000491465 ABCC8Q09428 1581 aa22.9■■□□□ 1.26
DCTN1-221ENST00000491465 WRNQ14191 1432 aaPredicted RBP eCLIP22.86■■□□□ 1.25
DCTN1-221ENST00000491465 SMARCA4P51532 1647 aa22.83■■□□□ 1.25
DCTN1-221ENST00000491465 PELP1Q8IZL8 1130 aaKnown RBP22.82■■□□□ 1.24
DCTN1-221ENST00000491465 CEP162Q5TB80 1403 aa22.82■■□□□ 1.24
DCTN1-221ENST00000491465 SOGA1O94964 1423 aa22.81■■□□□ 1.24
DCTN1-221ENST00000491465 SMARCA2P51531 1590 aa22.81■■□□□ 1.24
DCTN1-221ENST00000491465 TTBK1Q5TCY1 1321 aaPredicted RBP22.8■■□□□ 1.24
DCTN1-221ENST00000491465 TNIKQ9UKE5 1360 aa22.78■■□□□ 1.24
DCTN1-221ENST00000491465 CSRNP3Q8WYN3 585 aa22.76■■□□□ 1.23
DCTN1-221ENST00000491465 UBTFP17480 764 aaKnown RBP22.7■■□□□ 1.22
DCTN1-221ENST00000491465 DIEXFQ68CQ4 756 aaKnown RBP22.7■■□□□ 1.22
DCTN1-221ENST00000491465 EEA1Q15075 1411 aa22.69■■□□□ 1.22
DCTN1-221ENST00000491465 ACIN1Q9UKV3 1341 aaKnown RBP22.69■■□□□ 1.22
DCTN1-221ENST00000491465 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
DCTN1-221ENST00000491465 NEUROD1Q13562 356 aa22.65■■□□□ 1.22
DCTN1-221ENST00000491465 UNC13AQ9UPW8 1703 aa22.59■■□□□ 1.21
DCTN1-221ENST00000491465 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
DCTN1-221ENST00000491465 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.24e-6■□□□□ 9.3
DCTN1-221ENST00000491465 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
DCTN1-221ENST00000491465 ZNF316A6NFI3 1004 aaPredicted RBP22.46■■□□□ 1.19
DCTN1-221ENST00000491465 GTF3C3Q9Y5Q9 886 aa22.45■■□□□ 1.18
DCTN1-221ENST00000491465 CEP164Q9UPV0 1460 aa22.4■■□□□ 1.18
DCTN1-221ENST00000491465 BICRAQ9NZM4 1560 aa22.39■■□□□ 1.17
DCTN1-221ENST00000491465 PEG3Q9GZU2 1588 aa22.38■■□□□ 1.17
DCTN1-221ENST00000491465 HNRNPUL2Q1KMD3 747 aaKnown RBP22.37■■□□□ 1.17
DCTN1-221ENST00000491465 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
DCTN1-221ENST00000491465 CLIP1P30622 1438 aa22.34■■□□□ 1.17
DCTN1-221ENST00000491465 KIF21BO75037 1637 aa22.31■■□□□ 1.16
DCTN1-221ENST00000491465 VPS8Q8N3P4 1428 aa22.27■■□□□ 1.15
DCTN1-221ENST00000491465 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
DCTN1-221ENST00000491465 APLP2Q06481 763 aa22.25■■□□□ 1.15
DCTN1-221ENST00000491465 RAPGEF2Q9Y4G8 1499 aa22.22■■□□□ 1.15
DCTN1-221ENST00000491465 BAZ1BQ9UIG0 1483 aaKnown RBP22.21■■□□□ 1.15
DCTN1-221ENST00000491465 RANGAP1P46060 587 aaPredicted RBP22.19■■□□□ 1.14
DCTN1-221ENST00000491465 MIER1Q8N108 512 aa22.19■■□□□ 1.14
DCTN1-221ENST00000491465 YTHDC1Q96MU7 727 aaKnown RBP22.18■■□□□ 1.14
DCTN1-221ENST00000491465 TOP2BQ02880 1626 aa22.03■■□□□ 1.12
DCTN1-221ENST00000491465 CLSPNQ9HAW4 1339 aa21.96■■□□□ 1.11
DCTN1-221ENST00000491465 PRXQ9BXM0 1461 aa21.96■■□□□ 1.11
DCTN1-221ENST00000491465 KANK4Q5T7N3 995 aaPredicted RBP21.94■■□□□ 1.1
DCTN1-221ENST00000491465 DHX57Q6P158 1386 aaKnown RBP21.92■■□□□ 1.1
DCTN1-221ENST00000491465 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
DCTN1-221ENST00000491465 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
DCTN1-221ENST00000491465 BIVM-ERCC5R4GMW8 1640 aa21.9■■□□□ 1.1
DCTN1-221ENST00000491465 KIF27Q86VH2 1401 aa21.8■■□□□ 1.08
DCTN1-221ENST00000491465 RRBP1Q9P2E9 1410 aaKnown RBP21.79■■□□□ 1.08
DCTN1-221ENST00000491465 CUX1P39880 1505 aa21.79■■□□□ 1.08
DCTN1-221ENST00000491465 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
DCTN1-221ENST00000491465 CCNB3Q8WWL7 1395 aa21.71■■□□□ 1.07
DCTN1-221ENST00000491465 MYT1Q01538 1121 aa21.71■■□□□ 1.07
DCTN1-221ENST00000491465 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
DCTN1-221ENST00000491465 ARHGAP35Q9NRY4 1499 aa21.69■■□□□ 1.06
DCTN1-221ENST00000491465 CUX2O14529 1486 aa21.69■■□□□ 1.06
DCTN1-221ENST00000491465 CFTRP13569 1480 aa21.67■■□□□ 1.06
DCTN1-221ENST00000491465 ITGAEP38570 1179 aa21.67■■□□□ 1.06
DCTN1-221ENST00000491465 IGF1RP08069 1367 aa21.59■■□□□ 1.05
DCTN1-221ENST00000491465 SUPT16HQ9Y5B9 1047 aaKnown RBP21.56■■□□□ 1.04
DCTN1-221ENST00000491465 RAB3GAP2Q9H2M9 1393 aa21.55■■□□□ 1.04
DCTN1-221ENST00000491465 CARMIL1Q5VZK9 1371 aa21.48■■□□□ 1.03
DCTN1-221ENST00000491465 MAP3K1Q13233 1512 aa21.48■■□□□ 1.03
DCTN1-221ENST00000491465 MAPKBP1O60336 1514 aa21.46■■□□□ 1.03
DCTN1-221ENST00000491465 TIAM1Q13009 1591 aa21.46■■□□□ 1.03
DCTN1-221ENST00000491465 SETD5Q9C0A6 1442 aa21.46■■□□□ 1.03
DCTN1-221ENST00000491465 LRRC9Q6ZRR7 1453 aa21.43■■□□□ 1.02
DCTN1-221ENST00000491465 PHLDB1Q86UU1 1377 aa21.43■■□□□ 1.02
DCTN1-221ENST00000491465 KCNH8Q96L42 1107 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms