Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 PLXNB2-208ENST00000463165 3038 ntTSL 219.93■□□□□ 0.782e-6■□□□□ 9.6
PABPN1Q86U42 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.772e-6■□□□□ 9.6
PABPN1Q86U42 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.722e-6■□□□□ 9.6
PABPN1Q86U42 MRPS5-203ENST00000461916 793 ntTSL 219.57■□□□□ 0.722e-6■□□□□ 9.6
PABPN1Q86U42 IPO4-221ENST00000625289 297 ntTSL 5 BASIC19.02■□□□□ 0.642e-6■□□□□ 9.6
PABPN1Q86U42 RBM19-202ENST00000392561 3574 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.592e-6■□□□□ 9.6
PABPN1Q86U42 ACAA1-214ENST00000469559 4720 ntTSL 218.49■□□□□ 0.551e-7■□□□□ 9.6
PABPN1Q86U42 CDK5RAP2-212ENST00000480112 5826 ntTSL 1 (best)17.04■□□□□ 0.322e-6■□□□□ 9.6
PABPN1Q86U42 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.312e-6■□□□□ 9.6
PABPN1Q86U42 CDK5RAP2-210ENST00000474262 549 ntTSL 216.79■□□□□ 0.282e-6■□□□□ 9.6
PABPN1Q86U42 PLXNB2-213ENST00000610984 3443 ntTSL 5 BASIC16.79■□□□□ 0.282e-6■□□□□ 9.6
PABPN1Q86U42 DMAP1-204ENST00000372290 396 ntTSL 516.16■□□□□ 0.182e-6■□□□□ 9.6
PABPN1Q86U42 HARS-209ENST00000506579 3482 ntTSL 215.96■□□□□ 0.142e-6■□□□□ 9.6
PABPN1Q86U42 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.132e-6■□□□□ 9.6
PABPN1Q86U42 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.122e-6■□□□□ 9.6
PABPN1Q86U42 MRPS5-208ENST00000482821 3680 ntTSL 215.77■□□□□ 0.112e-6■□□□□ 9.6
PABPN1Q86U42 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.062e-6■□□□□ 9.6
PABPN1Q86U42 CDK5RAP2-204ENST00000416449 3902 ntTSL 514.63□□□□□ -0.072e-6■□□□□ 9.6
PABPN1Q86U42 CDK5RAP2-205ENST00000425647 2747 ntTSL 214.62□□□□□ -0.072e-6■□□□□ 9.6
PABPN1Q86U42 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.132e-6■□□□□ 9.6
PABPN1Q86U42 RBM19-203ENST00000545145 4422 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.142e-6■□□□□ 9.6
PABPN1Q86U42 PRPF40A-207ENST00000471701 293 ntTSL 212.65□□□□□ -0.382e-6■□□□□ 9.6
PABPN1Q86U42 CDK5RAP2-209ENST00000473282 5956 ntTSL 1 (best)11.22□□□□□ -0.612e-6■□□□□ 9.6
PABPN1Q86U42 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC6.71□□□□□ -1.332e-6■□□□□ 9.6
PABPN1Q86U42 NKTR-202ENST00000429888 7325 ntTSL 56.16□□□□□ -1.422e-6■□□□□ 9.6
PABPN1Q86U42 ELP1-203ENST00000495759 2840 ntTSL 1 (best)13.02□□□□□ -0.331e-9■□□□□ 9.6
PABPN1Q86U42 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC28.61■■■□□ 2.172e-7■□□□□ 9.6
PABPN1Q86U42 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.082e-7■□□□□ 9.6
PABPN1Q86U42 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC23.55■■□□□ 1.362e-7■□□□□ 9.6
PABPN1Q86U42 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.428e-7■□□□□ 9.6
PABPN1Q86U42 HSDL1-208ENST00000619773 3059 nt12.34□□□□□ -0.438e-7■□□□□ 9.6
PABPN1Q86U42 GPI-212ENST00000589985 1516 ntTSL 337.02■■■■□ 3.521e-9■□□□□ 9.6
PABPN1Q86U42 TMEM94-204ENST00000577245 384 ntTSL 316.52■□□□□ 0.244e-7■□□□□ 9.6
PABPN1Q86U42 RPL13-208ENST00000487034 615 ntTSL 1 (best)46.03■■■■■ 4.962e-10■□□□□ 9.6
PABPN1Q86U42 SIN3B-205ENST00000595049 904 ntTSL 241.92■■■■■ 4.32e-6■□□□□ 9.6
PABPN1Q86U42 SIN3B-203ENST00000594235 923 ntTSL 1 (best)39.87■■■■□ 3.972e-6■□□□□ 9.6
PABPN1Q86U42 SIN3B-211ENST00000601141 1473 ntTSL 239.36■■■■□ 3.892e-6■□□□□ 9.6
PABPN1Q86U42 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.042e-6■□□□□ 9.6
PABPN1Q86U42 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.022e-6■□□□□ 9.6
PABPN1Q86U42 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC24.42■■□□□ 1.52e-6■□□□□ 9.6
PABPN1Q86U42 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.442e-6■□□□□ 9.6
PABPN1Q86U42 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.292e-6■□□□□ 9.6
PABPN1Q86U42 LINC00969-229ENST00000596584 863 ntTSL 5 BASIC22.05■■□□□ 1.122e-8■□□□□ 9.6
PABPN1Q86U42 F7-206ENST00000541084 2873 ntTSL 2 BASIC18.71■□□□□ 0.592e-6■□□□□ 9.6
PABPN1Q86U42 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.32e-6■□□□□ 9.6
PABPN1Q86U42 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.252e-6■□□□□ 9.6
PABPN1Q86U42 IARS-210ENST00000474340 1748 ntTSL 215.48■□□□□ 0.078e-9■□□□□ 9.6
PABPN1Q86U42 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.082e-6■□□□□ 9.6
PABPN1Q86U42 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.152e-6■□□□□ 9.6
PABPN1Q86U42 LUC7L3-203ENST00000503728 783 ntTSL 513.36□□□□□ -0.272e-6■□□□□ 9.6
PABPN1Q86U42 IARS-201ENST00000375627 697 ntTSL 3 BASIC12.16□□□□□ -0.468e-9■□□□□ 9.6
PABPN1Q86U42 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.542e-6■□□□□ 9.6
PABPN1Q86U42 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.672e-6■□□□□ 9.6
PABPN1Q86U42 IARS-209ENST00000473915 610 ntTSL 39.76□□□□□ -0.858e-9■□□□□ 9.6
PABPN1Q86U42 CSNK1G2-206ENST00000589861 756 ntTSL 549.14■■■■■ 5.463e-8■□□□□ 9.6
PABPN1Q86U42 CSNK1G2-211ENST00000615564 964 ntTSL 538.66■■■■□ 3.783e-8■□□□□ 9.6
PABPN1Q86U42 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.913e-8■□□□□ 9.6
PABPN1Q86U42 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC27.22■■□□□ 1.951e-8■□□□□ 9.6
PABPN1Q86U42 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC23.16■■□□□ 1.31e-8■□□□□ 9.6
PABPN1Q86U42 NFE2L1-212ENST00000581319 481 ntTSL 321.02■□□□□ 0.961e-8■□□□□ 9.6
PABPN1Q86U42 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC20.47■□□□□ 0.871e-8■□□□□ 9.6
PABPN1Q86U42 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.781e-8■□□□□ 9.6
PABPN1Q86U42 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC18.86■□□□□ 0.611e-8■□□□□ 9.6
PABPN1Q86U42 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC17.83■□□□□ 0.451e-8■□□□□ 9.6
PABPN1Q86U42 MYO19-224ENST00000620943 654 ntTSL 215.97■□□□□ 0.156e-7■□□□□ 9.6
PABPN1Q86U42 FAM209A-202ENST00000481560 666 ntTSL 515.35■□□□□ 0.051e-8■□□□□ 9.6
PABPN1Q86U42 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC32.01■■■□□ 2.713e-7■□□□□ 9.5
PABPN1Q86U42 CLK3-216ENST00000564468 929 ntTSL 326.74■■□□□ 1.873e-7■□□□□ 9.5
PABPN1Q86U42 CLK3-204ENST00000483723 1749 ntTSL 224.58■■□□□ 1.523e-7■□□□□ 9.5
PABPN1Q86U42 CLK3-203ENST00000454830 3787 ntTSL 522.92■■□□□ 1.263e-7■□□□□ 9.5
PABPN1Q86U42 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.133e-7■□□□□ 9.5
PABPN1Q86U42 CLK3-206ENST00000562078 2455 ntTSL 221.93■■□□□ 1.13e-7■□□□□ 9.5
PABPN1Q86U42 CLK3-205ENST00000561673 639 ntTSL 321.11■□□□□ 0.973e-7■□□□□ 9.5
PABPN1Q86U42 CLK3-226ENST00000569406 3591 ntTSL 216.51■□□□□ 0.233e-7■□□□□ 9.5
PABPN1Q86U42 CLK3-212ENST00000563418 10498 ntTSL 37.15□□□□□ -1.263e-7■□□□□ 9.5
PABPN1Q86U42 FDPS-215ENST00000490140 680 ntTSL 224.7■■□□□ 1.542e-8■□□□□ 9.5
PABPN1Q86U42 BCL6-208ENST00000479110 635 ntTSL 233.76■■■□□ 2.993e-10■□□□□ 9.5
PABPN1Q86U42 AP1G2-222ENST00000556152 673 ntTSL 320.26■□□□□ 0.833e-10■□□□□ 9.5
PABPN1Q86U42 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC30.67■■■□□ 2.52e-8■□□□□ 9.5
PABPN1Q86U42 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.482e-8■□□□□ 9.5
PABPN1Q86U42 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC30.05■■■□□ 2.42e-8■□□□□ 9.5
PABPN1Q86U42 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC29.46■■■□□ 2.312e-8■□□□□ 9.5
PABPN1Q86U42 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC25.56■■□□□ 1.682e-8■□□□□ 9.5
PABPN1Q86U42 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC25.19■■□□□ 1.622e-8■□□□□ 9.5
PABPN1Q86U42 FDPS-217ENST00000492244 673 ntTSL 324.7■■□□□ 1.542e-8■□□□□ 9.5
PABPN1Q86U42 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC31.25■■■□□ 2.592e-6■□□□□ 9.5
PABPN1Q86U42 DNM2-213ENST00000589106 565 ntTSL 220.43■□□□□ 0.862e-6■□□□□ 9.5
PABPN1Q86U42 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.112e-8■□□□□ 9.5
PABPN1Q86U42 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC48.52■■■■■ 5.367e-8■□□□□ 9.5
PABPN1Q86U42 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC48.52■■■■■ 5.367e-8■□□□□ 9.5
PABPN1Q86U42 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC44.84■■■■■ 4.777e-8■□□□□ 9.5
PABPN1Q86U42 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC44.64■■■■■ 4.747e-8■□□□□ 9.5
PABPN1Q86U42 GUSBP11-205ENST00000452737 1662 ntTSL 1 (best)40.89■■■■■ 4.147e-8■□□□□ 9.5
PABPN1Q86U42 GUSBP11-201ENST00000422506 2055 ntTSL 238.67■■■■□ 3.787e-8■□□□□ 9.5
PABPN1Q86U42 SSUH2-215ENST00000492435 538 ntTSL 437.45■■■■□ 3.597e-8■□□□□ 9.5
PABPN1Q86U42 CDC37-202ENST00000588498 690 ntTSL 335.79■■■■□ 3.327e-7■□□□□ 9.5
PABPN1Q86U42 HNRNPH1-210ENST00000504549 980 ntTSL 533.56■■■□□ 2.964e-13■□□□□ 9.5
PABPN1Q86U42 HNRNPH1-244ENST00000523136 143 ntTSL 433.56■■■□□ 2.964e-13■□□□□ 9.5
PABPN1Q86U42 OBSL1-215ENST00000604031 1774 ntTSL 232.2■■■□□ 2.754e-10■□□□□ 9.5
PABPN1Q86U42 PLXNB1-213ENST00000473996 1034 ntTSL 230.22■■■□□ 2.437e-8■□□□□ 9.5
Retrieved 100 of 8,254 protein–RNA pairs in 59.5 ms