RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 NISCHQ9Y2I1 1504 aa32.76■■■□□ 2.83
SIN3B-206ENST00000595541 SHROOM4Q9ULL8 1493 aa28.6■■■□□ 2.17
SIN3B-206ENST00000595541 SUPT5HO00267 1087 aaKnown RBP28.26■■■□□ 2.11
SIN3B-206ENST00000595541 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
SIN3B-206ENST00000595541 MYO15BQ96JP2 1530 aa27.76■■■□□ 2.03
SIN3B-206ENST00000595541 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
SIN3B-206ENST00000595541 HRCP23327 699 aa27.63■■■□□ 2.01
SIN3B-206ENST00000595541 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
SIN3B-206ENST00000595541 PCGF6Q9BYE7 350 aa27.38■■□□□ 1.97
SIN3B-206ENST00000595541 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
SIN3B-206ENST00000595541 PPARGC1BQ86YN6 1023 aaKnown RBP27.21■■□□□ 1.95
SIN3B-206ENST00000595541 LOC105371045A0A1W2PR82 267 aa27.01■■□□□ 1.91
SIN3B-206ENST00000595541 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
SIN3B-206ENST00000595541 TRIM26Q12899 539 aaPredicted RBP26.58■■□□□ 1.85
SIN3B-206ENST00000595541 ABCC9O60706 1549 aa26.29■■□□□ 1.8
SIN3B-206ENST00000595541 RSF1Q96T23 1441 aaPredicted RBP26.21■■□□□ 1.79
SIN3B-206ENST00000595541 TRIM41Q8WV44 630 aa26.15■■□□□ 1.78
SIN3B-206ENST00000595541 FAM9AQ8IZU1 332 aaPredicted RBP26.14■■□□□ 1.78
SIN3B-206ENST00000595541 ZEB1P37275 1124 aaPredicted RBP26.07■■□□□ 1.76
SIN3B-206ENST00000595541 SCRIBQ14160 1630 aa26.05■■□□□ 1.76
SIN3B-206ENST00000595541 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
SIN3B-206ENST00000595541 EHMT2Q96KQ7 1210 aa26.03■■□□□ 1.76
SIN3B-206ENST00000595541 SCAF1Q9H7N4 1312 aaKnown RBP25.89■■□□□ 1.74
SIN3B-206ENST00000595541 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.7
SIN3B-206ENST00000595541 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
SIN3B-206ENST00000595541 PELP1Q8IZL8 1130 aaKnown RBP25.59■■□□□ 1.69
SIN3B-206ENST00000595541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.59■■□□□ 1.69
SIN3B-206ENST00000595541 WIZO95785 1651 aa25.49■■□□□ 1.67
SIN3B-206ENST00000595541 CCER1Q8TC90 406 aaPredicted RBP25.42■■□□□ 1.66
SIN3B-206ENST00000595541 NEUROD1Q13562 356 aa25.39■■□□□ 1.65
SIN3B-206ENST00000595541 ACIN1Q9UKV3 1341 aaKnown RBP25.36■■□□□ 1.65
SIN3B-206ENST00000595541 EIF4G1Q04637 1599 aaKnown RBP25.29■■□□□ 1.64
SIN3B-206ENST00000595541 TTBK1Q5TCY1 1321 aaPredicted RBP25.29■■□□□ 1.64
SIN3B-206ENST00000595541 NACADO15069 1562 aa25.28■■□□□ 1.64
SIN3B-206ENST00000595541 BAZ1AQ9NRL2 1556 aaPredicted RBP25.22■■□□□ 1.63
SIN3B-206ENST00000595541 DIEXFQ68CQ4 756 aaKnown RBP25.22■■□□□ 1.63
SIN3B-206ENST00000595541 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
SIN3B-206ENST00000595541 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
SIN3B-206ENST00000595541 GTF3C3Q9Y5Q9 886 aa25.14■■□□□ 1.62
SIN3B-206ENST00000595541 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
SIN3B-206ENST00000595541 CEP162Q5TB80 1403 aa25.07■■□□□ 1.6
SIN3B-206ENST00000595541 SOGA1O94964 1423 aa25.04■■□□□ 1.6
SIN3B-206ENST00000595541 CENPBP07199 599 aaPredicted RBP24.98■■□□□ 1.59
SIN3B-206ENST00000595541 RUSC2Q8N2Y8 1516 aa24.95■■□□□ 1.59
SIN3B-206ENST00000595541 TOP2AP11388 1531 aaKnown RBP24.94■■□□□ 1.58
SIN3B-206ENST00000595541 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
SIN3B-206ENST00000595541 SMARCA2P51531 1590 aa24.91■■□□□ 1.58
SIN3B-206ENST00000595541 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
SIN3B-206ENST00000595541 ZNF316A6NFI3 1004 aaPredicted RBP24.86■■□□□ 1.57
SIN3B-206ENST00000595541 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
SIN3B-206ENST00000595541 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
SIN3B-206ENST00000595541 YTHDC1Q96MU7 727 aaKnown RBP24.77■■□□□ 1.56
SIN3B-206ENST00000595541 MIER1Q8N108 512 aa24.71■■□□□ 1.55
SIN3B-206ENST00000595541 EEA1Q15075 1411 aa24.7■■□□□ 1.54
SIN3B-206ENST00000595541 HNRNPUL2Q1KMD3 747 aaKnown RBP24.69■■□□□ 1.54
SIN3B-206ENST00000595541 GOLGA3Q08378 1498 aa24.66■■□□□ 1.54
SIN3B-206ENST00000595541 MYT1Q01538 1121 aa24.61■■□□□ 1.53
SIN3B-206ENST00000595541 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
SIN3B-206ENST00000595541 CLIP1P30622 1438 aa24.47■■□□□ 1.51
SIN3B-206ENST00000595541 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
SIN3B-206ENST00000595541 CEP164Q9UPV0 1460 aa24.46■■□□□ 1.51
SIN3B-206ENST00000595541 PABPN1Q86U42 306 aaKnown RBP eCLIP24.42■■□□□ 1.52e-6■□□□□ 9.6
SIN3B-206ENST00000595541 RANGAP1P46060 587 aaPredicted RBP24.41■■□□□ 1.5
SIN3B-206ENST00000595541 KIF21BO75037 1637 aa24.41■■□□□ 1.5
SIN3B-206ENST00000595541 VPS8Q8N3P4 1428 aa24.4■■□□□ 1.5
SIN3B-206ENST00000595541 RAPGEF2Q9Y4G8 1499 aa24.36■■□□□ 1.49
SIN3B-206ENST00000595541 APLP2Q06481 763 aa24.28■■□□□ 1.48
SIN3B-206ENST00000595541 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
SIN3B-206ENST00000595541 PEG3Q9GZU2 1588 aa24.24■■□□□ 1.47
SIN3B-206ENST00000595541 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
SIN3B-206ENST00000595541 DHX57Q6P158 1386 aaKnown RBP24.2■■□□□ 1.46
SIN3B-206ENST00000595541 KANK4Q5T7N3 995 aaPredicted RBP24.14■■□□□ 1.45
SIN3B-206ENST00000595541 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
SIN3B-206ENST00000595541 SUPT16HQ9Y5B9 1047 aaKnown RBP24.07■■□□□ 1.44
SIN3B-206ENST00000595541 CLSPNQ9HAW4 1339 aa24.06■■□□□ 1.44
SIN3B-206ENST00000595541 ARAP1Q96P48 1450 aa24.05■■□□□ 1.44
SIN3B-206ENST00000595541 TOP2BQ02880 1626 aa24.01■■□□□ 1.43
SIN3B-206ENST00000595541 PRXQ9BXM0 1461 aa23.97■■□□□ 1.43
SIN3B-206ENST00000595541 KCNH8Q96L42 1107 aa23.92■■□□□ 1.42
SIN3B-206ENST00000595541 RRBP1Q9P2E9 1410 aaKnown RBP23.91■■□□□ 1.42
SIN3B-206ENST00000595541 ERICH3Q5RHP9 1530 aa23.9■■□□□ 1.42
SIN3B-206ENST00000595541 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
SIN3B-206ENST00000595541 ITGAEP38570 1179 aa23.86■■□□□ 1.41
SIN3B-206ENST00000595541 TSHZ2Q9NRE2 1034 aa23.83■■□□□ 1.41
SIN3B-206ENST00000595541 CUX2O14529 1486 aa23.82■■□□□ 1.4
SIN3B-206ENST00000595541 CCNB3Q8WWL7 1395 aa23.81■■□□□ 1.4
SIN3B-206ENST00000595541 CUX1P39880 1505 aa23.76■■□□□ 1.39
SIN3B-206ENST00000595541 ARHGAP35Q9NRY4 1499 aa23.76■■□□□ 1.39
SIN3B-206ENST00000595541 RAB3GAP2Q9H2M9 1393 aa23.72■■□□□ 1.39
SIN3B-206ENST00000595541 MAPKBP1O60336 1514 aa23.72■■□□□ 1.39
SIN3B-206ENST00000595541 KIF27Q86VH2 1401 aa23.7■■□□□ 1.38
SIN3B-206ENST00000595541 BCANQ96GW7 911 aa23.64■■□□□ 1.38
SIN3B-206ENST00000595541 SIN3AQ96ST3 1273 aa23.63■■□□□ 1.37
SIN3B-206ENST00000595541 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
SIN3B-206ENST00000595541 WDR97A6NE52 1622 aa23.58■■□□□ 1.37
SIN3B-206ENST00000595541 HIRIP3Q9BW71 556 aaPredicted RBP23.54■■□□□ 1.36
SIN3B-206ENST00000595541 SETD5Q9C0A6 1442 aa23.54■■□□□ 1.36
SIN3B-206ENST00000595541 FKBP8Q14318 412 aa23.54■■□□□ 1.36
SIN3B-206ENST00000595541 PHLDB1Q86UU1 1377 aa23.53■■□□□ 1.36
SIN3B-206ENST00000595541 ANP32EQ9BTT0 268 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms