RNA–Protein interactions for RNA: ENST00000492435.1

SSUH2-215, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 4

Gene SSUH2, Length 538 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-215ENST00000492435 NISCHQ9Y2I1 1504 aa45.91■■■■■ 4.94
SSUH2-215ENST00000492435 CCDC180Q9P1Z9 1646 aa40.87■■■■■ 4.13
SSUH2-215ENST00000492435 ABCC9O60706 1549 aa40.1■■■■■ 4.01
SSUH2-215ENST00000492435 RB1CC1Q8TDY2 1594 aa38.53■■■■□ 3.76
SSUH2-215ENST00000492435 NACADO15069 1562 aa38.48■■■■□ 3.75
SSUH2-215ENST00000492435 MYO15BQ96JP2 1530 aa38.29■■■■□ 3.72
SSUH2-215ENST00000492435 DCAF8L2P0C7V8 631 aa38.25■■■■□ 3.71
SSUH2-215ENST00000492435 ZCCHC6Q5VYS8 1495 aaKnown RBP38.19■■■■□ 3.7
SSUH2-215ENST00000492435 DCAF1Q9Y4B6 1507 aa38.03■■■■□ 3.68
SSUH2-215ENST00000492435 UNC13AQ9UPW8 1703 aa37.69■■■■□ 3.62
SSUH2-215ENST00000492435 BICRAQ9NZM4 1560 aa37.46■■■■□ 3.59
SSUH2-215ENST00000492435 PABPN1Q86U42 306 aaKnown RBP eCLIP37.45■■■■□ 3.597e-8■□□□□ 9.5
SSUH2-215ENST00000492435 SCRIBQ14160 1630 aa37.18■■■■□ 3.54
SSUH2-215ENST00000492435 DNAJC5BQ9UF47 199 aa37.12■■■■□ 3.53
SSUH2-215ENST00000492435 SHROOM4Q9ULL8 1493 aa37.04■■■■□ 3.52
SSUH2-215ENST00000492435 EIF4G1Q04637 1599 aaKnown RBP36.43■■■■□ 3.42
SSUH2-215ENST00000492435 CC2D2AQ9P2K1 1620 aa36.31■■■■□ 3.4
SSUH2-215ENST00000492435 CECR2Q9BXF3 1484 aa36.08■■■■□ 3.37
SSUH2-215ENST00000492435 SMARCA4P51532 1647 aa35.62■■■■□ 3.29
SSUH2-215ENST00000492435 NCAPD3P42695 1498 aa35.56■■■■□ 3.28
SSUH2-215ENST00000492435 BAZ1AQ9NRL2 1556 aaPredicted RBP35.55■■■■□ 3.28
SSUH2-215ENST00000492435 ATAD2BQ9ULI0 1458 aa35.51■■■■□ 3.28
SSUH2-215ENST00000492435 SMARCA2P51531 1590 aa35.42■■■■□ 3.26
SSUH2-215ENST00000492435 PEG3Q9GZU2 1588 aa35.37■■■■□ 3.25
SSUH2-215ENST00000492435 MROH2BQ7Z745 1585 aa35.36■■■■□ 3.25
SSUH2-215ENST00000492435 HMGXB3Q12766 1538 aa35.32■■■■□ 3.24
SSUH2-215ENST00000492435 BAZ1BQ9UIG0 1483 aaKnown RBP35.13■■■■□ 3.21
SSUH2-215ENST00000492435 WIZO95785 1651 aa34.94■■■■□ 3.18
SSUH2-215ENST00000492435 RSF1Q96T23 1441 aaPredicted RBP34.91■■■■□ 3.18
SSUH2-215ENST00000492435 NESP48681 1621 aa34.69■■■■□ 3.14
SSUH2-215ENST00000492435 LAMC3Q9Y6N6 1575 aa34.59■■■■□ 3.13
SSUH2-215ENST00000492435 TOP2AP11388 1531 aaKnown RBP34.56■■■■□ 3.12
SSUH2-215ENST00000492435 ERCC6Q03468 1493 aa34.52■■■■□ 3.12
SSUH2-215ENST00000492435 CADPSQ9ULU8 1353 aa34.48■■■■□ 3.11
SSUH2-215ENST00000492435 PDS5BQ9NTI5 1447 aa34.34■■■■□ 3.09
SSUH2-215ENST00000492435 CUX2O14529 1486 aa34.33■■■■□ 3.09
SSUH2-215ENST00000492435 CFTRP13569 1480 aa34.26■■■■□ 3.07
SSUH2-215ENST00000492435 KIF21AQ7Z4S6 1674 aa34.25■■■■□ 3.07
SSUH2-215ENST00000492435 THOC2Q8NI27 1593 aaKnown RBP34.22■■■■□ 3.07
SSUH2-215ENST00000492435 CCDC88BA6NC98 1476 aa34.19■■■■□ 3.06
SSUH2-215ENST00000492435 FANCD2Q9BXW9 1451 aa34.03■■■■□ 3.04
SSUH2-215ENST00000492435 MRC2Q9UBG0 1479 aa34■■■■□ 3.03
SSUH2-215ENST00000492435 CEP164Q9UPV0 1460 aa33.98■■■■□ 3.03
SSUH2-215ENST00000492435 WDR62O43379 1518 aa33.93■■■■□ 3.02
SSUH2-215ENST00000492435 PRDM2Q13029 1718 aa33.9■■■■□ 3.02
SSUH2-215ENST00000492435 URB2Q14146 1524 aaKnown RBP33.74■■■□□ 2.99
SSUH2-215ENST00000492435 SUPT5HO00267 1087 aaKnown RBP33.73■■■□□ 2.99
SSUH2-215ENST00000492435 DNAJC5Q9H3Z4 198 aa33.56■■■□□ 2.96
SSUH2-215ENST00000492435 TOPBP1Q92547 1522 aa33.48■■■□□ 2.95
SSUH2-215ENST00000492435 ABCC8Q09428 1581 aa33.48■■■□□ 2.95
SSUH2-215ENST00000492435 DNMBPQ6XZF7 1577 aa33.42■■■□□ 2.94
SSUH2-215ENST00000492435 IFT140Q96RY7 1462 aa33.31■■■□□ 2.92
SSUH2-215ENST00000492435 POLA1P09884 1462 aaPredicted RBP33.19■■■□□ 2.9
SSUH2-215ENST00000492435 ZNF608Q9ULD9 1512 aaPredicted RBP33.19■■■□□ 2.9
SSUH2-215ENST00000492435 CUX1P39880 1505 aa33.18■■■□□ 2.9
SSUH2-215ENST00000492435 TARBP1Q13395 1621 aaKnown RBP33.17■■■□□ 2.9
SSUH2-215ENST00000492435 FGD5Q6ZNL6 1462 aa33.05■■■□□ 2.88
SSUH2-215ENST00000492435 SOGA1O94964 1423 aa33.04■■■□□ 2.88
SSUH2-215ENST00000492435 RAD54L2Q9Y4B4 1467 aa33.04■■■□□ 2.88
SSUH2-215ENST00000492435 EIF4G3O43432 1585 aaKnown RBP33.01■■■□□ 2.88
SSUH2-215ENST00000492435 AQRO60306 1485 aaKnown RBP eCLIP32.97■■■□□ 2.874e-7■□□□□ 9.4
SSUH2-215ENST00000492435 WDR97A6NE52 1622 aa32.89■■■□□ 2.86
SSUH2-215ENST00000492435 OSCARQ8IYS5 282 aa32.88■■■□□ 2.85
SSUH2-215ENST00000492435 TDRD9Q8NDG6 1382 aaKnown RBP32.87■■■□□ 2.85
SSUH2-215ENST00000492435 WRNQ14191 1432 aaPredicted RBP eCLIP32.85■■■□□ 2.85
SSUH2-215ENST00000492435 BIVM-ERCC5R4GMW8 1640 aa32.84■■■□□ 2.85
SSUH2-215ENST00000492435 TOP2BQ02880 1626 aa32.84■■■□□ 2.85
SSUH2-215ENST00000492435 SYNJ1O43426 1573 aa32.79■■■□□ 2.84
SSUH2-215ENST00000492435 ABCA10Q8WWZ4 1543 aa32.77■■■□□ 2.84
SSUH2-215ENST00000492435 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
SSUH2-215ENST00000492435 GAPVD1Q14C86 1478 aa32.65■■■□□ 2.82
SSUH2-215ENST00000492435 ABCA5Q8WWZ7 1642 aa32.65■■■□□ 2.82
SSUH2-215ENST00000492435 SNAPC4Q5SXM2 1469 aa32.62■■■□□ 2.81
SSUH2-215ENST00000492435 CHD1O14646 1710 aa32.62■■■□□ 2.81
SSUH2-215ENST00000492435 MAGI1Q96QZ7 1491 aaPredicted RBP32.61■■■□□ 2.81
SSUH2-215ENST00000492435 PBRM1Q86U86 1689 aa32.56■■■□□ 2.8
SSUH2-215ENST00000492435 FBLN2P98095 1184 aa32.5■■■□□ 2.79
SSUH2-215ENST00000492435 SYNJ2O15056 1496 aa32.49■■■□□ 2.79
SSUH2-215ENST00000492435 CHMP7Q8WUX9 453 aaPredicted RBP32.45■■■□□ 2.79
SSUH2-215ENST00000492435 ERICH3Q5RHP9 1530 aa32.37■■■□□ 2.77
SSUH2-215ENST00000492435 RIMBP3CA6NJZ7 1639 aa32.35■■■□□ 2.77
SSUH2-215ENST00000492435 RIMBP3BA6NNM3 1639 aa32.35■■■□□ 2.77
SSUH2-215ENST00000492435 RIMBP3Q9UFD9 1639 aa32.35■■■□□ 2.77
SSUH2-215ENST00000492435 CLASP1Q7Z460 1538 aa32.34■■■□□ 2.77
SSUH2-215ENST00000492435 ARHGEF11O15085 1522 aa32.33■■■□□ 2.77
SSUH2-215ENST00000492435 ADAMTS12P58397 1594 aa32.32■■■□□ 2.76
SSUH2-215ENST00000492435 FHAD1B1AJZ9 1412 aa32.28■■■□□ 2.76
SSUH2-215ENST00000492435 GRIN2AQ12879 1464 aa32.25■■■□□ 2.75
SSUH2-215ENST00000492435 TRIM41Q8WV44 630 aa32.19■■■□□ 2.74
SSUH2-215ENST00000492435 KIF27Q86VH2 1401 aa32.17■■■□□ 2.74
SSUH2-215ENST00000492435 NUP160Q12769 1436 aa32.17■■■□□ 2.74
SSUH2-215ENST00000492435 IGF1RP08069 1367 aa32.16■■■□□ 2.74
SSUH2-215ENST00000492435 CEP170Q5SW79 1584 aa32.11■■■□□ 2.73
SSUH2-215ENST00000492435 ARAP1Q96P48 1450 aa32.07■■■□□ 2.72
SSUH2-215ENST00000492435 CYB5RLQ6IPT4 315 aa32.01■■■□□ 2.71
SSUH2-215ENST00000492435 CUL7Q14999 1698 aa31.99■■■□□ 2.71
SSUH2-215ENST00000492435 SHROOM2Q13796 1616 aa31.95■■■□□ 2.71
SSUH2-215ENST00000492435 CARMIL1Q5VZK9 1371 aa31.9■■■□□ 2.7
SSUH2-215ENST00000492435 RUSC2Q8N2Y8 1516 aa31.88■■■□□ 2.69
SSUH2-215ENST00000492435 ERCC6L2Q5T890 1561 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms