RNA–Protein interactions for RNA: ENST00000219439.8

HSDL1-201, Transcript of hydroxysteroid dehydrogenase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSDL1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSDL1-201ENST00000219439 NISCHQ9Y2I1 1504 aa30.41■■■□□ 2.46
HSDL1-201ENST00000219439 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
HSDL1-201ENST00000219439 CCDC180Q9P1Z9 1646 aa26.19■■□□□ 1.78
HSDL1-201ENST00000219439 SUPT5HO00267 1087 aaKnown RBP25.89■■□□□ 1.74
HSDL1-201ENST00000219439 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
HSDL1-201ENST00000219439 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
HSDL1-201ENST00000219439 ABCC9O60706 1549 aa25.18■■□□□ 1.62
HSDL1-201ENST00000219439 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
HSDL1-201ENST00000219439 MYO15BQ96JP2 1530 aa25■■□□□ 1.59
HSDL1-201ENST00000219439 DCAF1Q9Y4B6 1507 aa24.86■■□□□ 1.57
HSDL1-201ENST00000219439 PCGF6Q9BYE7 350 aa24.6■■□□□ 1.53
HSDL1-201ENST00000219439 HRCP23327 699 aa24.58■■□□□ 1.53
HSDL1-201ENST00000219439 NACADO15069 1562 aa24.49■■□□□ 1.51
HSDL1-201ENST00000219439 LOC105371045A0A1W2PR82 267 aa24.45■■□□□ 1.51
HSDL1-201ENST00000219439 SCRIBQ14160 1630 aa24.45■■□□□ 1.5
HSDL1-201ENST00000219439 RB1CC1Q8TDY2 1594 aa24.33■■□□□ 1.49
HSDL1-201ENST00000219439 RSF1Q96T23 1441 aaPredicted RBP24.17■■□□□ 1.46
HSDL1-201ENST00000219439 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
HSDL1-201ENST00000219439 TRIM41Q8WV44 630 aa24.04■■□□□ 1.44
HSDL1-201ENST00000219439 TRIM26Q12899 539 aaPredicted RBP23.99■■□□□ 1.43
HSDL1-201ENST00000219439 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
HSDL1-201ENST00000219439 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.428e-7■□□□□ 9.6
HSDL1-201ENST00000219439 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
HSDL1-201ENST00000219439 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
HSDL1-201ENST00000219439 UNC13AQ9UPW8 1703 aa23.79■■□□□ 1.4
HSDL1-201ENST00000219439 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
HSDL1-201ENST00000219439 WIZO95785 1651 aa23.58■■□□□ 1.36
HSDL1-201ENST00000219439 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
HSDL1-201ENST00000219439 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
HSDL1-201ENST00000219439 BAZ1AQ9NRL2 1556 aaPredicted RBP23.4■■□□□ 1.34
HSDL1-201ENST00000219439 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
HSDL1-201ENST00000219439 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
HSDL1-201ENST00000219439 ABCC8Q09428 1581 aa23.16■■□□□ 1.3
HSDL1-201ENST00000219439 TOP2AP11388 1531 aaKnown RBP23.16■■□□□ 1.3
HSDL1-201ENST00000219439 CCDC88BA6NC98 1476 aa23.12■■□□□ 1.29
HSDL1-201ENST00000219439 TTBK1Q5TCY1 1321 aaPredicted RBP23.12■■□□□ 1.29
HSDL1-201ENST00000219439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.1■■□□□ 1.29
HSDL1-201ENST00000219439 CCER1Q8TC90 406 aaPredicted RBP23.06■■□□□ 1.28
HSDL1-201ENST00000219439 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
HSDL1-201ENST00000219439 SOGA1O94964 1423 aa22.98■■□□□ 1.27
HSDL1-201ENST00000219439 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
HSDL1-201ENST00000219439 CEP162Q5TB80 1403 aa22.94■■□□□ 1.26
HSDL1-201ENST00000219439 UBTFP17480 764 aaKnown RBP22.94■■□□□ 1.26
HSDL1-201ENST00000219439 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.26
HSDL1-201ENST00000219439 BAZ1BQ9UIG0 1483 aaKnown RBP22.88■■□□□ 1.25
HSDL1-201ENST00000219439 RUSC2Q8N2Y8 1516 aa22.85■■□□□ 1.25
HSDL1-201ENST00000219439 WRNQ14191 1432 aaPredicted RBP eCLIP22.84■■□□□ 1.25
HSDL1-201ENST00000219439 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
HSDL1-201ENST00000219439 PEG3Q9GZU2 1588 aa22.83■■□□□ 1.25
HSDL1-201ENST00000219439 EEA1Q15075 1411 aa22.8■■□□□ 1.24
HSDL1-201ENST00000219439 SCAF1Q9H7N4 1312 aaKnown RBP22.77■■□□□ 1.24
HSDL1-201ENST00000219439 GOLGA3Q08378 1498 aa22.71■■□□□ 1.23
HSDL1-201ENST00000219439 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
HSDL1-201ENST00000219439 DIEXFQ68CQ4 756 aaKnown RBP22.64■■□□□ 1.21
HSDL1-201ENST00000219439 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
HSDL1-201ENST00000219439 SYNJ1O43426 1573 aa22.57■■□□□ 1.2
HSDL1-201ENST00000219439 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
HSDL1-201ENST00000219439 HMGXB3Q12766 1538 aa22.55■■□□□ 1.2
HSDL1-201ENST00000219439 CEP164Q9UPV0 1460 aa22.55■■□□□ 1.2
HSDL1-201ENST00000219439 HNRNPUL2Q1KMD3 747 aaKnown RBP22.53■■□□□ 1.2
HSDL1-201ENST00000219439 ACIN1Q9UKV3 1341 aaKnown RBP22.51■■□□□ 1.19
HSDL1-201ENST00000219439 CLIP1P30622 1438 aa22.5■■□□□ 1.19
HSDL1-201ENST00000219439 NEUROD1Q13562 356 aa22.49■■□□□ 1.19
HSDL1-201ENST00000219439 APLP2Q06481 763 aa22.47■■□□□ 1.19
HSDL1-201ENST00000219439 KIF21BO75037 1637 aa22.44■■□□□ 1.18
HSDL1-201ENST00000219439 CENPBP07199 599 aaPredicted RBP22.41■■□□□ 1.18
HSDL1-201ENST00000219439 PELP1Q8IZL8 1130 aaKnown RBP22.4■■□□□ 1.18
HSDL1-201ENST00000219439 RAPGEF2Q9Y4G8 1499 aa22.4■■□□□ 1.18
HSDL1-201ENST00000219439 ZNF316A6NFI3 1004 aaPredicted RBP22.4■■□□□ 1.18
HSDL1-201ENST00000219439 VPS8Q8N3P4 1428 aa22.38■■□□□ 1.17
HSDL1-201ENST00000219439 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
HSDL1-201ENST00000219439 GTF3C3Q9Y5Q9 886 aa22.31■■□□□ 1.16
HSDL1-201ENST00000219439 YTHDC1Q96MU7 727 aaKnown RBP22.24■■□□□ 1.15
HSDL1-201ENST00000219439 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
HSDL1-201ENST00000219439 CFTRP13569 1480 aa22.21■■□□□ 1.15
HSDL1-201ENST00000219439 CADPSQ9ULU8 1353 aa22.21■■□□□ 1.15
HSDL1-201ENST00000219439 MIER1Q8N108 512 aa22.13■■□□□ 1.13
HSDL1-201ENST00000219439 BIVM-ERCC5R4GMW8 1640 aa22.11■■□□□ 1.13
HSDL1-201ENST00000219439 NESP48681 1621 aa22.09■■□□□ 1.13
HSDL1-201ENST00000219439 PRXQ9BXM0 1461 aa22.08■■□□□ 1.13
HSDL1-201ENST00000219439 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
HSDL1-201ENST00000219439 KANK4Q5T7N3 995 aaPredicted RBP22.06■■□□□ 1.12
HSDL1-201ENST00000219439 ARAP1Q96P48 1450 aa22.05■■□□□ 1.12
HSDL1-201ENST00000219439 CUX1P39880 1505 aa22.03■■□□□ 1.12
HSDL1-201ENST00000219439 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
HSDL1-201ENST00000219439 FANCD2Q9BXW9 1451 aa21.98■■□□□ 1.11
HSDL1-201ENST00000219439 DHX57Q6P158 1386 aaKnown RBP21.95■■□□□ 1.1
HSDL1-201ENST00000219439 ITGAEP38570 1179 aa21.94■■□□□ 1.1
HSDL1-201ENST00000219439 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
HSDL1-201ENST00000219439 CLSPNQ9HAW4 1339 aa21.89■■□□□ 1.09
HSDL1-201ENST00000219439 ARHGAP35Q9NRY4 1499 aa21.85■■□□□ 1.09
HSDL1-201ENST00000219439 LAMC3Q9Y6N6 1575 aa21.85■■□□□ 1.09
HSDL1-201ENST00000219439 RRBP1Q9P2E9 1410 aaKnown RBP21.83■■□□□ 1.08
HSDL1-201ENST00000219439 PDS5BQ9NTI5 1447 aa21.82■■□□□ 1.08
HSDL1-201ENST00000219439 CCNB3Q8WWL7 1395 aa21.82■■□□□ 1.08
HSDL1-201ENST00000219439 CUX2O14529 1486 aa21.82■■□□□ 1.08
HSDL1-201ENST00000219439 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
HSDL1-201ENST00000219439 IGF1RP08069 1367 aa21.75■■□□□ 1.07
HSDL1-201ENST00000219439 CARMIL1Q5VZK9 1371 aa21.71■■□□□ 1.07
HSDL1-201ENST00000219439 ATP1B4Q9UN42 357 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms