Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.58■□□□□ 0.41e-6■■■■□ 20.1
CSTF2TQ9H0L4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.341e-6■■■■□ 20.1
CSTF2TQ9H0L4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.23■□□□□ 0.191e-6■■■■□ 20.1
CSTF2TQ9H0L4 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.771e-6■■■■□ 20.1
CSTF2TQ9H0L4 PRKAR1B-202ENST00000400758 888 ntTSL 323.68■■□□□ 1.388e-7■■■■□ 20.1
CSTF2TQ9H0L4 SMOX-208ENST00000484515 900 ntTSL 322.98■■□□□ 1.279e-7■■■■□ 20.1
CSTF2TQ9H0L4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.999e-7■■■■□ 20.1
CSTF2TQ9H0L4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.05■□□□□ 0.969e-7■■■■□ 20.1
CSTF2TQ9H0L4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.48■□□□□ 0.879e-7■■■■□ 20.1
CSTF2TQ9H0L4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.12■□□□□ 0.659e-7■■■■□ 20.1
CSTF2TQ9H0L4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.41■□□□□ 0.229e-7■■■■□ 20.1
CSTF2TQ9H0L4 SMOX-210ENST00000493223 280 ntTSL 39.87□□□□□ -0.839e-7■■■■□ 20.1
CSTF2TQ9H0L4 FLOT1-208ENST00000470643 852 ntTSL 320.37■□□□□ 0.852e-8■■■■□ 20.1
CSTF2TQ9H0L4 FLOT1-210ENST00000484168 1101 ntTSL 520.37■□□□□ 0.852e-8■■■■□ 20.1
CSTF2TQ9H0L4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.822e-8■■■■□ 20.1
CSTF2TQ9H0L4 FLOT1-211ENST00000484693 1001 ntTSL 218.18■□□□□ 0.52e-8■■■■□ 20.1
CSTF2TQ9H0L4 PKD1P6-201ENST00000343738 4769 ntBASIC19.88■□□□□ 0.772e-7■■■■□ 20.1
CSTF2TQ9H0L4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.3■□□□□ 0.522e-10■■■■□ 20.1
CSTF2TQ9H0L4 KLHL23-203ENST00000437875 895 ntTSL 37.28□□□□□ -1.242e-16■■■■□ 20.1
CSTF2TQ9H0L4 NEU4-211ENST00000435855 2281 ntTSL 220.14■□□□□ 0.812e-9■■■■□ 20.1
CSTF2TQ9H0L4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.72e-9■■■■□ 20.1
CSTF2TQ9H0L4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.612e-9■■■■□ 20.1
CSTF2TQ9H0L4 NEU4-217ENST00000618597 3013 ntTSL 217.35■□□□□ 0.372e-9■■■■□ 20.1
CSTF2TQ9H0L4 NEU4-206ENST00000415936 860 ntTSL 316.99■□□□□ 0.312e-9■■■■□ 20.1
CSTF2TQ9H0L4 NEU4-208ENST00000423583 753 ntTSL 516.47■□□□□ 0.232e-9■■■■□ 20.1
CSTF2TQ9H0L4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.551e-6■■■■□ 20.1
CSTF2TQ9H0L4 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC11.81□□□□□ -0.522e-8■■■■□ 20.1
CSTF2TQ9H0L4 CREBRF-205ENST00000522692 2466 ntTSL 1 (best) BASIC8.74□□□□□ -1.012e-8■■■■□ 20.1
CSTF2TQ9H0L4 CREBRF-204ENST00000520464 5163 ntTSL 27.99□□□□□ -1.132e-8■■■■□ 20.1
CSTF2TQ9H0L4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.922e-8■■■■□ 20.1
CSTF2TQ9H0L4 EHBP1-217ENST00000472809 1374 ntTSL 510.2□□□□□ -0.785e-11■■■■□ 20.1
CSTF2TQ9H0L4 EHBP1-208ENST00000427809 581 ntTSL 45.1□□□□□ -1.595e-11■■■■□ 20.1
CSTF2TQ9H0L4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.837e-7■■■■□ 20.1
CSTF2TQ9H0L4 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)18■□□□□ 0.477e-7■■■■□ 20.1
CSTF2TQ9H0L4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.693e-8■■■■□ 20.1
CSTF2TQ9H0L4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.693e-8■■■■□ 20.1
CSTF2TQ9H0L4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.63e-8■■■■□ 20.1
CSTF2TQ9H0L4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.71■□□□□ 0.113e-8■■■■□ 20.1
CSTF2TQ9H0L4 NSMF-210ENST00000484316 933 ntTSL 315.63■□□□□ 0.093e-8■■■■□ 20.1
CSTF2TQ9H0L4 NSMF-207ENST00000371482 2888 ntTSL 1 (best)14.89□□□□□ -0.033e-8■■■■□ 20.1
CSTF2TQ9H0L4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.053e-8■■■■□ 20.1
CSTF2TQ9H0L4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.053e-8■■■■□ 20.1
CSTF2TQ9H0L4 NSMF-209ENST00000482448 551 ntTSL 310.21□□□□□ -0.773e-8■■■■□ 20.1
CSTF2TQ9H0L4 AC068580.4-202ENST00000636579 350 ntTSL 314.37□□□□□ -0.111e-6■■■■□ 20.1
CSTF2TQ9H0L4 FTH1-206ENST00000530019 550 ntTSL 414.68□□□□□ -0.065e-10■■■■□ 20.1
CSTF2TQ9H0L4 FTH1-205ENST00000529631 507 ntTSL 4 BASIC11.87□□□□□ -0.515e-10■■■■□ 20.1
CSTF2TQ9H0L4 FTH1-203ENST00000529191 530 ntTSL 2 BASIC10.54□□□□□ -0.725e-10■■■■□ 20.1
CSTF2TQ9H0L4 BCL9L-205ENST00000532899 611 ntTSL 515.23■□□□□ 0.031e-6■■■■□ 20.1
CSTF2TQ9H0L4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.68□□□□□ -0.061e-6■■■■□ 20.1
CSTF2TQ9H0L4 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.578e-7■■■■□ 20.1
CSTF2TQ9H0L4 LINC-PINT-205ENST00000433079 1262 ntTSL 1 (best)17.01■□□□□ 0.316e-9■■■■□ 20.1
CSTF2TQ9H0L4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.046e-7■■■■□ 20.1
CSTF2TQ9H0L4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.638e-6■■■■□ 20.1
CSTF2TQ9H0L4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.38■■□□□ 1.491e-10■■■■□ 20.1
CSTF2TQ9H0L4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.43■■□□□ 1.023e-6■■■■□ 20.1
CSTF2TQ9H0L4 MKNK2-203ENST00000585667 870 ntTSL 521.08■□□□□ 0.978e-6■■■■□ 20.1
CSTF2TQ9H0L4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.918e-6■■■■□ 20.1
CSTF2TQ9H0L4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.918e-6■■■■□ 20.1
CSTF2TQ9H0L4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.868e-6■■■■□ 20.1
CSTF2TQ9H0L4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.26■□□□□ 0.838e-6■■■■□ 20.1
CSTF2TQ9H0L4 HDAC4-209ENST00000487617 819 ntTSL 319.19■□□□□ 0.667e-7■■■■□ 20.1
CSTF2TQ9H0L4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.618e-6■■■■□ 20.1
CSTF2TQ9H0L4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.578e-6■■■■□ 20.1
CSTF2TQ9H0L4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.571e-6■■■■□ 20.1
CSTF2TQ9H0L4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.61■□□□□ 0.571e-6■■■■□ 20.1
CSTF2TQ9H0L4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.491e-6■■■■□ 20.1
CSTF2TQ9H0L4 AC131212.4-201ENST00000623606 975 ntBASIC17.99■□□□□ 0.478e-6■■■■□ 20.1
CSTF2TQ9H0L4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.458e-6■■■■□ 20.1
CSTF2TQ9H0L4 PRKCD-204ENST00000477794 404 ntTSL 317.78■□□□□ 0.441e-6■■■■□ 20.1
CSTF2TQ9H0L4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.328e-6■■■■□ 20.1
CSTF2TQ9H0L4 ZGPAT-211ENST00000484569 749 ntTSL 216.97■□□□□ 0.318e-6■■■■□ 20.1
CSTF2TQ9H0L4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.291e-6■■■■□ 20.1
CSTF2TQ9H0L4 XRCC3-217ENST00000556980 801 ntTSL 516.86■□□□□ 0.298e-6■■■■□ 20.1
CSTF2TQ9H0L4 MAFF-203ENST00000417948 697 ntTSL 416.79■□□□□ 0.281e-6■■■■□ 20.1
CSTF2TQ9H0L4 XRCC3-215ENST00000555964 562 ntTSL 416.15■□□□□ 0.188e-6■■■■□ 20.1
CSTF2TQ9H0L4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.178e-6■■■■□ 20.1
CSTF2TQ9H0L4 XRCC3-218ENST00000557439 2599 ntTSL 516.14■□□□□ 0.178e-6■■■■□ 20.1
CSTF2TQ9H0L4 RGL2-245ENST00000491168 2316 ntTSL 216.03■□□□□ 0.168e-6■■■■□ 20.1
CSTF2TQ9H0L4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.148e-6■■■■□ 20.1
CSTF2TQ9H0L4 PRKCD-206ENST00000487897 562 ntTSL 415.83■□□□□ 0.121e-6■■■■□ 20.1
CSTF2TQ9H0L4 XRCC3-204ENST00000553361 746 ntTSL 515.68■□□□□ 0.18e-6■■■■□ 20.1
CSTF2TQ9H0L4 RDH13-206ENST00000587026 610 ntTSL 515.65■□□□□ 0.18e-6■■■■□ 20.1
CSTF2TQ9H0L4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.068e-6■■■■□ 20.1
CSTF2TQ9H0L4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.36■□□□□ 0.054e-7■■■■□ 20.1
CSTF2TQ9H0L4 LINC00969-277ENST00000626852 511 ntTSL 515.33■□□□□ 0.044e-7■■■■□ 20.1
CSTF2TQ9H0L4 TMEM143-211ENST00000600816 810 ntTSL 215.18■□□□□ 0.024e-7■■■■□ 20.1
CSTF2TQ9H0L4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.02□□□□□ -0.018e-6■■■■□ 20.1
CSTF2TQ9H0L4 SNUPN-211ENST00000569817 1023 ntTSL 314.62□□□□□ -0.078e-6■■■■□ 20.1
CSTF2TQ9H0L4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.4□□□□□ -0.14e-7■■■■□ 20.1
CSTF2TQ9H0L4 SNUPN-210ENST00000568162 759 ntTSL 314.38□□□□□ -0.118e-6■■■■□ 20.1
CSTF2TQ9H0L4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.3□□□□□ -0.128e-6■■■■□ 20.1
CSTF2TQ9H0L4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.138e-6■■■■□ 20.1
CSTF2TQ9H0L4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.158e-6■■■■□ 20.1
CSTF2TQ9H0L4 CCDC144NL-202ENST00000539177 443 ntTSL 314.01□□□□□ -0.178e-6■■■■□ 20.1
CSTF2TQ9H0L4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.193e-6■■■■□ 20.1
CSTF2TQ9H0L4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.228e-6■■■■□ 20.1
CSTF2TQ9H0L4 RDH13-216ENST00000591023 553 ntTSL 413.7□□□□□ -0.228e-6■■■■□ 20.1
CSTF2TQ9H0L4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.221e-10■■■■□ 20.1
CSTF2TQ9H0L4 XRCC3-203ENST00000553332 560 ntTSL 313.44□□□□□ -0.268e-6■■■■□ 20.1
CSTF2TQ9H0L4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.284e-7■■■■□ 20.1
Retrieved 100 of 19,151 protein–RNA pairs in 113.4 ms