RNA–Protein interactions for RNA: ENST00000262577.5

ZC3H3-201, Transcript of zinc finger CCCH-type containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZC3H3, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3-201ENST00000262577 NISCHQ9Y2I1 1504 aa24.73■■□□□ 1.55
ZC3H3-201ENST00000262577 CCDC180Q9P1Z9 1646 aa21.57■■□□□ 1.04
ZC3H3-201ENST00000262577 ZCCHC6Q5VYS8 1495 aaKnown RBP20.87■□□□□ 0.93
ZC3H3-201ENST00000262577 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
ZC3H3-201ENST00000262577 DCAF1Q9Y4B6 1507 aa20.58■□□□□ 0.89
ZC3H3-201ENST00000262577 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
ZC3H3-201ENST00000262577 MYO15BQ96JP2 1530 aa20.26■□□□□ 0.83
ZC3H3-201ENST00000262577 SUPT5HO00267 1087 aaKnown RBP20.23■□□□□ 0.83
ZC3H3-201ENST00000262577 NACADO15069 1562 aa19.95■□□□□ 0.78
ZC3H3-201ENST00000262577 HRCP23327 699 aa19.86■□□□□ 0.77
ZC3H3-201ENST00000262577 ABCC9O60706 1549 aa19.85■□□□□ 0.77
ZC3H3-201ENST00000262577 PELP1Q8IZL8 1130 aaKnown RBP19.7■□□□□ 0.74
ZC3H3-201ENST00000262577 SCRIBQ14160 1630 aa19.67■□□□□ 0.74
ZC3H3-201ENST00000262577 RB1CC1Q8TDY2 1594 aa19.67■□□□□ 0.74
ZC3H3-201ENST00000262577 PPARGC1BQ86YN6 1023 aaKnown RBP19.66■□□□□ 0.74
ZC3H3-201ENST00000262577 PCGF6Q9BYE7 350 aa19.51■□□□□ 0.71
ZC3H3-201ENST00000262577 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
ZC3H3-201ENST00000262577 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
ZC3H3-201ENST00000262577 EHMT2Q96KQ7 1210 aa19.24■□□□□ 0.67
ZC3H3-201ENST00000262577 BICRAQ9NZM4 1560 aa19.13■□□□□ 0.65
ZC3H3-201ENST00000262577 CECR2Q9BXF3 1484 aa19.11■□□□□ 0.65
ZC3H3-201ENST00000262577 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
ZC3H3-201ENST00000262577 MROH2BQ7Z745 1585 aa19.08■□□□□ 0.64
ZC3H3-201ENST00000262577 BAZ1AQ9NRL2 1556 aaPredicted RBP19.07■□□□□ 0.64
ZC3H3-201ENST00000262577 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
ZC3H3-201ENST00000262577 LOC105371045A0A1W2PR82 267 aa19.05■□□□□ 0.64
ZC3H3-201ENST00000262577 MYT1Q01538 1121 aa19.01■□□□□ 0.63
ZC3H3-201ENST00000262577 SMARCA4P51532 1647 aa18.98■□□□□ 0.63
ZC3H3-201ENST00000262577 WIZO95785 1651 aa18.96■□□□□ 0.63
ZC3H3-201ENST00000262577 FAM9AQ8IZU1 332 aaPredicted RBP18.91■□□□□ 0.62
ZC3H3-201ENST00000262577 PEG3Q9GZU2 1588 aa18.84■□□□□ 0.61
ZC3H3-201ENST00000262577 TOP2AP11388 1531 aaKnown RBP18.81■□□□□ 0.6
ZC3H3-201ENST00000262577 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
ZC3H3-201ENST00000262577 PABPN1Q86U42 306 aaKnown RBP eCLIP18.69■□□□□ 0.58
ZC3H3-201ENST00000262577 SMARCA2P51531 1590 aa18.64■□□□□ 0.57
ZC3H3-201ENST00000262577 TTBK1Q5TCY1 1321 aaPredicted RBP18.56■□□□□ 0.56
ZC3H3-201ENST00000262577 TRIM26Q12899 539 aaPredicted RBP18.56■□□□□ 0.56
ZC3H3-201ENST00000262577 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
ZC3H3-201ENST00000262577 ATAD2BQ9ULI0 1458 aa18.54■□□□□ 0.56
ZC3H3-201ENST00000262577 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
ZC3H3-201ENST00000262577 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
ZC3H3-201ENST00000262577 ACIN1Q9UKV3 1341 aaKnown RBP18.47■□□□□ 0.55
ZC3H3-201ENST00000262577 NEUROD1Q13562 356 aa18.46■□□□□ 0.55
ZC3H3-201ENST00000262577 GTF3C3Q9Y5Q9 886 aa18.46■□□□□ 0.55
ZC3H3-201ENST00000262577 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
ZC3H3-201ENST00000262577 BAZ1BQ9UIG0 1483 aaKnown RBP18.4■□□□□ 0.54
ZC3H3-201ENST00000262577 NCAPD3P42695 1498 aa18.38■□□□□ 0.53
ZC3H3-201ENST00000262577 CENPBP07199 599 aaPredicted RBP18.28■□□□□ 0.52
ZC3H3-201ENST00000262577 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
ZC3H3-201ENST00000262577 PRDM2Q13029 1718 aa18.13■□□□□ 0.49
ZC3H3-201ENST00000262577 CC2D2AQ9P2K1 1620 aa18.11■□□□□ 0.49
ZC3H3-201ENST00000262577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
ZC3H3-201ENST00000262577 RANGAP1P46060 587 aaPredicted RBP18.07■□□□□ 0.48
ZC3H3-201ENST00000262577 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
ZC3H3-201ENST00000262577 SYNJ1O43426 1573 aa18.05■□□□□ 0.48
ZC3H3-201ENST00000262577 YTHDC1Q96MU7 727 aaKnown RBP18.04■□□□□ 0.48
ZC3H3-201ENST00000262577 CFTRP13569 1480 aa18.03■□□□□ 0.48
ZC3H3-201ENST00000262577 DIEXFQ68CQ4 756 aaKnown RBP18.03■□□□□ 0.48
ZC3H3-201ENST00000262577 BIVM-ERCC5R4GMW8 1640 aa18.03■□□□□ 0.48
ZC3H3-201ENST00000262577 EEA1Q15075 1411 aa18.02■□□□□ 0.48
ZC3H3-201ENST00000262577 TOP2BQ02880 1626 aa18.01■□□□□ 0.47
ZC3H3-201ENST00000262577 CCER1Q8TC90 406 aaPredicted RBP17.99■□□□□ 0.47
ZC3H3-201ENST00000262577 BCL11AQ9H165 835 aa17.92■□□□□ 0.46
ZC3H3-201ENST00000262577 SOGA1O94964 1423 aa17.9■□□□□ 0.46
ZC3H3-201ENST00000262577 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
ZC3H3-201ENST00000262577 CUX1P39880 1505 aa17.84■□□□□ 0.45
ZC3H3-201ENST00000262577 KIF21BO75037 1637 aa17.83■□□□□ 0.45
ZC3H3-201ENST00000262577 RUSC2Q8N2Y8 1516 aa17.83■□□□□ 0.44
ZC3H3-201ENST00000262577 UBTFP17480 764 aaKnown RBP17.79■□□□□ 0.44
ZC3H3-201ENST00000262577 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
ZC3H3-201ENST00000262577 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
ZC3H3-201ENST00000262577 GOLGA3Q08378 1498 aa17.73■□□□□ 0.43
ZC3H3-201ENST00000262577 LAMC3Q9Y6N6 1575 aa17.72■□□□□ 0.43
ZC3H3-201ENST00000262577 CEP164Q9UPV0 1460 aa17.71■□□□□ 0.43
ZC3H3-201ENST00000262577 ERICH3Q5RHP9 1530 aa17.65■□□□□ 0.42
ZC3H3-201ENST00000262577 FANCD2Q9BXW9 1451 aa17.65■□□□□ 0.42
ZC3H3-201ENST00000262577 HNRNPUL2Q1KMD3 747 aaKnown RBP17.64■□□□□ 0.41
ZC3H3-201ENST00000262577 ANP32EQ9BTT0 268 aa17.62■□□□□ 0.41
ZC3H3-201ENST00000262577 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
ZC3H3-201ENST00000262577 CEP162Q5TB80 1403 aa17.62■□□□□ 0.41
ZC3H3-201ENST00000262577 PRXQ9BXM0 1461 aa17.61■□□□□ 0.41
ZC3H3-201ENST00000262577 KIF27Q86VH2 1401 aa17.57■□□□□ 0.4
ZC3H3-201ENST00000262577 NESP48681 1621 aa17.56■□□□□ 0.4
ZC3H3-201ENST00000262577 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
ZC3H3-201ENST00000262577 RAPGEF2Q9Y4G8 1499 aa17.55■□□□□ 0.4
ZC3H3-201ENST00000262577 MIER1Q8N108 512 aa17.53■□□□□ 0.4
ZC3H3-201ENST00000262577 TOPBP1Q92547 1522 aa17.52■□□□□ 0.4
ZC3H3-201ENST00000262577 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.4
ZC3H3-201ENST00000262577 WDR97A6NE52 1622 aa17.51■□□□□ 0.39
ZC3H3-201ENST00000262577 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
ZC3H3-201ENST00000262577 ABCA10Q8WWZ4 1543 aa17.48■□□□□ 0.39
ZC3H3-201ENST00000262577 PDS5BQ9NTI5 1447 aa17.47■□□□□ 0.39
ZC3H3-201ENST00000262577 URB2Q14146 1524 aaKnown RBP17.45■□□□□ 0.38
ZC3H3-201ENST00000262577 POLA1P09884 1462 aaPredicted RBP17.45■□□□□ 0.38
ZC3H3-201ENST00000262577 CUX2O14529 1486 aa17.44■□□□□ 0.38
ZC3H3-201ENST00000262577 PRKCSHP14314 528 aaPredicted RBP17.41■□□□□ 0.38
ZC3H3-201ENST00000262577 IGF1RP08069 1367 aa17.41■□□□□ 0.38
ZC3H3-201ENST00000262577 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
ZC3H3-201ENST00000262577 CLIP1P30622 1438 aa17.4■□□□□ 0.38
ZC3H3-201ENST00000262577 TSHZ2Q9NRE2 1034 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms