RNA–Protein interactions for RNA: ENST00000520420.5

CREBRF-203, Transcript of CREB3 regulatory factor, humanhuman

TSL 1 (best) BASIC

Gene CREBRF, Length 1,660 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-203ENST00000520420 NISCHQ9Y2I1 1504 aa30.91■■■□□ 2.54
CREBRF-203ENST00000520420 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
CREBRF-203ENST00000520420 ABCC9O60706 1549 aa26.81■■□□□ 1.88
CREBRF-203ENST00000520420 RB1CC1Q8TDY2 1594 aa25.79■■□□□ 1.72
CREBRF-203ENST00000520420 NACADO15069 1562 aa25.78■■□□□ 1.72
CREBRF-203ENST00000520420 ZCCHC6Q5VYS8 1495 aaKnown RBP25.77■■□□□ 1.72
CREBRF-203ENST00000520420 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
CREBRF-203ENST00000520420 MYO15BQ96JP2 1530 aa25.64■■□□□ 1.7
CREBRF-203ENST00000520420 DCAF1Q9Y4B6 1507 aa25.56■■□□□ 1.68
CREBRF-203ENST00000520420 UNC13AQ9UPW8 1703 aa25.29■■□□□ 1.64
CREBRF-203ENST00000520420 SCRIBQ14160 1630 aa25.08■■□□□ 1.61
CREBRF-203ENST00000520420 BICRAQ9NZM4 1560 aa25.06■■□□□ 1.6
CREBRF-203ENST00000520420 PABPN1Q86U42 306 aaKnown RBP eCLIP25.04■■□□□ 1.6
CREBRF-203ENST00000520420 SHROOM4Q9ULL8 1493 aa24.73■■□□□ 1.55
CREBRF-203ENST00000520420 DNAJC5BQ9UF47 199 aa24.55■■□□□ 1.52
CREBRF-203ENST00000520420 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
CREBRF-203ENST00000520420 CC2D2AQ9P2K1 1620 aa24.26■■□□□ 1.47
CREBRF-203ENST00000520420 CECR2Q9BXF3 1484 aa24.1■■□□□ 1.45
CREBRF-203ENST00000520420 SMARCA4P51532 1647 aa23.99■■□□□ 1.43
CREBRF-203ENST00000520420 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
CREBRF-203ENST00000520420 MROH2BQ7Z745 1585 aa23.85■■□□□ 1.41
CREBRF-203ENST00000520420 ATAD2BQ9ULI0 1458 aa23.83■■□□□ 1.4
CREBRF-203ENST00000520420 NCAPD3P42695 1498 aa23.79■■□□□ 1.4
CREBRF-203ENST00000520420 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
CREBRF-203ENST00000520420 PEG3Q9GZU2 1588 aa23.75■■□□□ 1.39
CREBRF-203ENST00000520420 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
CREBRF-203ENST00000520420 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
CREBRF-203ENST00000520420 WIZO95785 1651 aa23.61■■□□□ 1.37
CREBRF-203ENST00000520420 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.37
CREBRF-203ENST00000520420 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
CREBRF-203ENST00000520420 NESP48681 1621 aa23.24■■□□□ 1.31
CREBRF-203ENST00000520420 LAMC3Q9Y6N6 1575 aa23.15■■□□□ 1.3
CREBRF-203ENST00000520420 CADPSQ9ULU8 1353 aa23.09■■□□□ 1.29
CREBRF-203ENST00000520420 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
CREBRF-203ENST00000520420 CCDC88BA6NC98 1476 aa23.06■■□□□ 1.28
CREBRF-203ENST00000520420 SUPT5HO00267 1087 aaKnown RBP23.01■■□□□ 1.27
CREBRF-203ENST00000520420 CFTRP13569 1480 aa22.99■■□□□ 1.27
CREBRF-203ENST00000520420 KIF21AQ7Z4S6 1674 aa22.98■■□□□ 1.27
CREBRF-203ENST00000520420 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
CREBRF-203ENST00000520420 THOC2Q8NI27 1593 aaKnown RBP22.87■■□□□ 1.25
CREBRF-203ENST00000520420 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
CREBRF-203ENST00000520420 FANCD2Q9BXW9 1451 aa22.84■■□□□ 1.25
CREBRF-203ENST00000520420 CUX2O14529 1486 aa22.8■■□□□ 1.24
CREBRF-203ENST00000520420 CEP164Q9UPV0 1460 aa22.8■■□□□ 1.24
CREBRF-203ENST00000520420 MRC2Q9UBG0 1479 aa22.75■■□□□ 1.23
CREBRF-203ENST00000520420 WDR62O43379 1518 aa22.69■■□□□ 1.22
CREBRF-203ENST00000520420 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
CREBRF-203ENST00000520420 TOPBP1Q92547 1522 aa22.5■■□□□ 1.19
CREBRF-203ENST00000520420 DNMBPQ6XZF7 1577 aa22.47■■□□□ 1.19
CREBRF-203ENST00000520420 ABCC8Q09428 1581 aa22.44■■□□□ 1.18
CREBRF-203ENST00000520420 CUX1P39880 1505 aa22.37■■□□□ 1.17
CREBRF-203ENST00000520420 POLA1P09884 1462 aaPredicted RBP22.31■■□□□ 1.16
CREBRF-203ENST00000520420 IFT140Q96RY7 1462 aa22.31■■□□□ 1.16
CREBRF-203ENST00000520420 FGD5Q6ZNL6 1462 aa22.27■■□□□ 1.15
CREBRF-203ENST00000520420 TARBP1Q13395 1621 aaKnown RBP22.27■■□□□ 1.15
CREBRF-203ENST00000520420 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
CREBRF-203ENST00000520420 WRNQ14191 1432 aaPredicted RBP eCLIP22.22■■□□□ 1.15
CREBRF-203ENST00000520420 RAD54L2Q9Y4B4 1467 aa22.21■■□□□ 1.15
CREBRF-203ENST00000520420 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
CREBRF-203ENST00000520420 SOGA1O94964 1423 aa22.19■■□□□ 1.14
CREBRF-203ENST00000520420 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
CREBRF-203ENST00000520420 BIVM-ERCC5R4GMW8 1640 aa22.18■■□□□ 1.14
CREBRF-203ENST00000520420 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
CREBRF-203ENST00000520420 WDR97A6NE52 1622 aa22.11■■□□□ 1.13
CREBRF-203ENST00000520420 AQRO60306 1485 aaKnown RBP eCLIP22.11■■□□□ 1.13
CREBRF-203ENST00000520420 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.12
CREBRF-203ENST00000520420 ABCA10Q8WWZ4 1543 aa22.05■■□□□ 1.12
CREBRF-203ENST00000520420 DNAJC5Q9H3Z4 198 aa22.01■■□□□ 1.11
CREBRF-203ENST00000520420 ABCA5Q8WWZ7 1642 aa21.97■■□□□ 1.11
CREBRF-203ENST00000520420 GAPVD1Q14C86 1478 aa21.95■■□□□ 1.1
CREBRF-203ENST00000520420 PBRM1Q86U86 1689 aa21.94■■□□□ 1.1
CREBRF-203ENST00000520420 GRIN2BQ13224 1484 aa21.92■■□□□ 1.1
CREBRF-203ENST00000520420 SNAPC4Q5SXM2 1469 aa21.91■■□□□ 1.1
CREBRF-203ENST00000520420 CHD1O14646 1710 aa21.89■■□□□ 1.09
CREBRF-203ENST00000520420 MAGI1Q96QZ7 1491 aaPredicted RBP21.86■■□□□ 1.09
CREBRF-203ENST00000520420 OSCARQ8IYS5 282 aa21.85■■□□□ 1.09
CREBRF-203ENST00000520420 FBLN2P98095 1184 aa21.79■■□□□ 1.08
CREBRF-203ENST00000520420 SYNJ2O15056 1496 aa21.79■■□□□ 1.08
CREBRF-203ENST00000520420 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
CREBRF-203ENST00000520420 ADAMTS12P58397 1594 aa21.75■■□□□ 1.07
CREBRF-203ENST00000520420 CHMP7Q8WUX9 453 aaPredicted RBP21.73■■□□□ 1.07
CREBRF-203ENST00000520420 KIF27Q86VH2 1401 aa21.73■■□□□ 1.07
CREBRF-203ENST00000520420 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
CREBRF-203ENST00000520420 FHAD1B1AJZ9 1412 aa21.68■■□□□ 1.06
CREBRF-203ENST00000520420 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
CREBRF-203ENST00000520420 IGF1RP08069 1367 aa21.65■■□□□ 1.06
CREBRF-203ENST00000520420 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
CREBRF-203ENST00000520420 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
CREBRF-203ENST00000520420 CUL7Q14999 1698 aa21.59■■□□□ 1.05
CREBRF-203ENST00000520420 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
CREBRF-203ENST00000520420 NUP160Q12769 1436 aa21.56■■□□□ 1.04
CREBRF-203ENST00000520420 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
CREBRF-203ENST00000520420 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
CREBRF-203ENST00000520420 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
CREBRF-203ENST00000520420 ARHGEF11O15085 1522 aa21.54■■□□□ 1.04
CREBRF-203ENST00000520420 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
CREBRF-203ENST00000520420 CARMIL1Q5VZK9 1371 aa21.51■■□□□ 1.03
CREBRF-203ENST00000520420 SHROOM2Q13796 1616 aa21.41■■□□□ 1.02
CREBRF-203ENST00000520420 RAPGEF2Q9Y4G8 1499 aa21.4■■□□□ 1.02
CREBRF-203ENST00000520420 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms