RNA–Protein interactions for RNA: ENST00000487897.5

PRKCD-206, Transcript of protein kinase C delta, humanhuman

TSL 4

Gene PRKCD, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-206ENST00000487897 NISCHQ9Y2I1 1504 aa41.31■■■■■ 4.2
PRKCD-206ENST00000487897 CCDC180Q9P1Z9 1646 aa36.74■■■■□ 3.47
PRKCD-206ENST00000487897 ABCC9O60706 1549 aa36.19■■■■□ 3.38
PRKCD-206ENST00000487897 RB1CC1Q8TDY2 1594 aa34.72■■■■□ 3.15
PRKCD-206ENST00000487897 DCAF8L2P0C7V8 631 aa34.67■■■■□ 3.14
PRKCD-206ENST00000487897 NACADO15069 1562 aa34.65■■■■□ 3.14
PRKCD-206ENST00000487897 MYO15BQ96JP2 1530 aa34.4■■■■□ 3.1
PRKCD-206ENST00000487897 ZCCHC6Q5VYS8 1495 aaKnown RBP34.35■■■■□ 3.09
PRKCD-206ENST00000487897 DCAF1Q9Y4B6 1507 aa34.17■■■■□ 3.06
PRKCD-206ENST00000487897 PABPN1Q86U42 306 aaKnown RBP eCLIP33.84■■■■□ 3.01
PRKCD-206ENST00000487897 UNC13AQ9UPW8 1703 aa33.83■■■■□ 3.01
PRKCD-206ENST00000487897 BICRAQ9NZM4 1560 aa33.66■■■□□ 2.98
PRKCD-206ENST00000487897 SCRIBQ14160 1630 aa33.52■■■□□ 2.96
PRKCD-206ENST00000487897 DNAJC5BQ9UF47 199 aa33.43■■■□□ 2.94
PRKCD-206ENST00000487897 SHROOM4Q9ULL8 1493 aa33.31■■■□□ 2.92
PRKCD-206ENST00000487897 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
PRKCD-206ENST00000487897 CC2D2AQ9P2K1 1620 aa32.69■■■□□ 2.82
PRKCD-206ENST00000487897 CECR2Q9BXF3 1484 aa32.55■■■□□ 2.8
PRKCD-206ENST00000487897 SMARCA4P51532 1647 aa32.06■■■□□ 2.72
PRKCD-206ENST00000487897 BAZ1AQ9NRL2 1556 aaPredicted RBP32.02■■■□□ 2.72
PRKCD-206ENST00000487897 NCAPD3P42695 1498 aa32.01■■■□□ 2.71
PRKCD-206ENST00000487897 ATAD2BQ9ULI0 1458 aa31.98■■■□□ 2.71
PRKCD-206ENST00000487897 SMARCA2P51531 1590 aa31.91■■■□□ 2.7
PRKCD-206ENST00000487897 MROH2BQ7Z745 1585 aa31.82■■■□□ 2.68
PRKCD-206ENST00000487897 HMGXB3Q12766 1538 aa31.78■■■□□ 2.68
PRKCD-206ENST00000487897 PEG3Q9GZU2 1588 aa31.77■■■□□ 2.68
PRKCD-206ENST00000487897 BAZ1BQ9UIG0 1483 aaKnown RBP31.7■■■□□ 2.66
PRKCD-206ENST00000487897 WIZO95785 1651 aa31.44■■■□□ 2.62
PRKCD-206ENST00000487897 RSF1Q96T23 1441 aaPredicted RBP31.43■■■□□ 2.62
PRKCD-206ENST00000487897 NESP48681 1621 aa31.25■■■□□ 2.59
PRKCD-206ENST00000487897 ERCC6Q03468 1493 aa31.21■■■□□ 2.59
PRKCD-206ENST00000487897 LAMC3Q9Y6N6 1575 aa31.14■■■□□ 2.58
PRKCD-206ENST00000487897 TOP2AP11388 1531 aaKnown RBP31.12■■■□□ 2.57
PRKCD-206ENST00000487897 CADPSQ9ULU8 1353 aa31.07■■■□□ 2.56
PRKCD-206ENST00000487897 PDS5BQ9NTI5 1447 aa30.99■■■□□ 2.55
PRKCD-206ENST00000487897 CUX2O14529 1486 aa30.95■■■□□ 2.54
PRKCD-206ENST00000487897 CFTRP13569 1480 aa30.83■■■□□ 2.53
PRKCD-206ENST00000487897 KIF21AQ7Z4S6 1674 aa30.81■■■□□ 2.52
PRKCD-206ENST00000487897 CCDC88BA6NC98 1476 aa30.79■■■□□ 2.52
PRKCD-206ENST00000487897 THOC2Q8NI27 1593 aaKnown RBP30.77■■■□□ 2.52
PRKCD-206ENST00000487897 FANCD2Q9BXW9 1451 aa30.69■■■□□ 2.5
PRKCD-206ENST00000487897 MRC2Q9UBG0 1479 aa30.65■■■□□ 2.5
PRKCD-206ENST00000487897 CEP164Q9UPV0 1460 aa30.65■■■□□ 2.5
PRKCD-206ENST00000487897 WDR62O43379 1518 aa30.54■■■□□ 2.48
PRKCD-206ENST00000487897 SUPT5HO00267 1087 aaKnown RBP30.53■■■□□ 2.48
PRKCD-206ENST00000487897 PRDM2Q13029 1718 aa30.45■■■□□ 2.47
PRKCD-206ENST00000487897 URB2Q14146 1524 aaKnown RBP30.37■■■□□ 2.45
PRKCD-206ENST00000487897 DNAJC5Q9H3Z4 198 aa30.27■■■□□ 2.44
PRKCD-206ENST00000487897 ABCC8Q09428 1581 aa30.18■■■□□ 2.42
PRKCD-206ENST00000487897 TOPBP1Q92547 1522 aa30.17■■■□□ 2.42
PRKCD-206ENST00000487897 DNMBPQ6XZF7 1577 aa30.1■■■□□ 2.41
PRKCD-206ENST00000487897 IFT140Q96RY7 1462 aa30.03■■■□□ 2.4
PRKCD-206ENST00000487897 ZNF608Q9ULD9 1512 aaPredicted RBP29.91■■■□□ 2.38
PRKCD-206ENST00000487897 POLA1P09884 1462 aaPredicted RBP29.9■■■□□ 2.38
PRKCD-206ENST00000487897 CUX1P39880 1505 aa29.86■■■□□ 2.37
PRKCD-206ENST00000487897 TARBP1Q13395 1621 aaKnown RBP29.82■■■□□ 2.36
PRKCD-206ENST00000487897 SOGA1O94964 1423 aa29.81■■■□□ 2.36
PRKCD-206ENST00000487897 FGD5Q6ZNL6 1462 aa29.8■■■□□ 2.36
PRKCD-206ENST00000487897 RAD54L2Q9Y4B4 1467 aa29.78■■■□□ 2.36
PRKCD-206ENST00000487897 AQRO60306 1485 aaKnown RBP eCLIP29.74■■■□□ 2.351e-6■■■■□ 23.9
PRKCD-206ENST00000487897 EIF4G3O43432 1585 aaKnown RBP29.73■■■□□ 2.35
PRKCD-206ENST00000487897 OSCARQ8IYS5 282 aa29.7■■■□□ 2.35
PRKCD-206ENST00000487897 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
PRKCD-206ENST00000487897 WRNQ14191 1432 aaPredicted RBP eCLIP29.63■■■□□ 2.33
PRKCD-206ENST00000487897 WDR97A6NE52 1622 aa29.58■■■□□ 2.33
PRKCD-206ENST00000487897 TOP2BQ02880 1626 aa29.55■■■□□ 2.32
PRKCD-206ENST00000487897 SYNJ1O43426 1573 aa29.52■■■□□ 2.32
PRKCD-206ENST00000487897 BIVM-ERCC5R4GMW8 1640 aa29.52■■■□□ 2.32
PRKCD-206ENST00000487897 ABCA10Q8WWZ4 1543 aa29.51■■■□□ 2.32
PRKCD-206ENST00000487897 GRIN2BQ13224 1484 aa29.46■■■□□ 2.31
PRKCD-206ENST00000487897 FBLN2P98095 1184 aa29.45■■■□□ 2.31
PRKCD-206ENST00000487897 GAPVD1Q14C86 1478 aa29.44■■■□□ 2.3
PRKCD-206ENST00000487897 SNAPC4Q5SXM2 1469 aa29.42■■■□□ 2.3
PRKCD-206ENST00000487897 MAGI1Q96QZ7 1491 aaPredicted RBP29.39■■■□□ 2.3
PRKCD-206ENST00000487897 ABCA5Q8WWZ7 1642 aa29.36■■■□□ 2.29
PRKCD-206ENST00000487897 CHD1O14646 1710 aa29.36■■■□□ 2.29
PRKCD-206ENST00000487897 CHMP7Q8WUX9 453 aaPredicted RBP29.34■■■□□ 2.29
PRKCD-206ENST00000487897 PBRM1Q86U86 1689 aa29.29■■■□□ 2.28
PRKCD-206ENST00000487897 SYNJ2O15056 1496 aa29.29■■■□□ 2.28
PRKCD-206ENST00000487897 TRIM41Q8WV44 630 aa29.18■■■□□ 2.26
PRKCD-206ENST00000487897 ARHGEF11O15085 1522 aa29.15■■■□□ 2.26
PRKCD-206ENST00000487897 ERICH3Q5RHP9 1530 aa29.15■■■□□ 2.26
PRKCD-206ENST00000487897 RIMBP3CA6NJZ7 1639 aa29.13■■■□□ 2.25
PRKCD-206ENST00000487897 RIMBP3BA6NNM3 1639 aa29.13■■■□□ 2.25
PRKCD-206ENST00000487897 RIMBP3Q9UFD9 1639 aa29.13■■■□□ 2.25
PRKCD-206ENST00000487897 FHAD1B1AJZ9 1412 aa29.11■■■□□ 2.25
PRKCD-206ENST00000487897 ADAMTS12P58397 1594 aa29.09■■■□□ 2.25
PRKCD-206ENST00000487897 CLASP1Q7Z460 1538 aa29.09■■■□□ 2.25
PRKCD-206ENST00000487897 GRIN2AQ12879 1464 aa29.07■■■□□ 2.24
PRKCD-206ENST00000487897 KIF27Q86VH2 1401 aa29.04■■■□□ 2.24
PRKCD-206ENST00000487897 IGF1RP08069 1367 aa28.97■■■□□ 2.23
PRKCD-206ENST00000487897 NUP160Q12769 1436 aa28.96■■■□□ 2.23
PRKCD-206ENST00000487897 CYB5RLQ6IPT4 315 aa28.95■■■□□ 2.22
PRKCD-206ENST00000487897 CEP170Q5SW79 1584 aa28.9■■■□□ 2.22
PRKCD-206ENST00000487897 ARAP1Q96P48 1450 aa28.89■■■□□ 2.22
PRKCD-206ENST00000487897 CUL7Q14999 1698 aa28.8■■■□□ 2.2
PRKCD-206ENST00000487897 CARMIL1Q5VZK9 1371 aa28.78■■■□□ 2.2
PRKCD-206ENST00000487897 JPH4Q96JJ6 628 aa28.72■■■□□ 2.19
PRKCD-206ENST00000487897 SHROOM2Q13796 1616 aa28.72■■■□□ 2.19
PRKCD-206ENST00000487897 RUSC2Q8N2Y8 1516 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms