RNA–Protein interactions for RNA: ENST00000520464.1

CREBRF-204, Transcript of CREB3 regulatory factor, humanhuman

TSL 2

Gene CREBRF, Length 5,163 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-204ENST00000520464 NISCHQ9Y2I1 1504 aa15.95■□□□□ 0.14
CREBRF-204ENST00000520464 DCAF8L2P0C7V8 631 aa14.8□□□□□ -0.04
CREBRF-204ENST00000520464 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
CREBRF-204ENST00000520464 SHROOM4Q9ULL8 1493 aa13.98□□□□□ -0.17
CREBRF-204ENST00000520464 MYT1Q01538 1121 aa13.8□□□□□ -0.2
CREBRF-204ENST00000520464 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
CREBRF-204ENST00000520464 CCDC180Q9P1Z9 1646 aa13.63□□□□□ -0.23
CREBRF-204ENST00000520464 FAM9AQ8IZU1 332 aaPredicted RBP13.48□□□□□ -0.25
CREBRF-204ENST00000520464 APLP2Q06481 763 aa13.4□□□□□ -0.27
CREBRF-204ENST00000520464 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
CREBRF-204ENST00000520464 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
CREBRF-204ENST00000520464 ABCC9O60706 1549 aa13.29□□□□□ -0.28
CREBRF-204ENST00000520464 DCAF1Q9Y4B6 1507 aa13.06□□□□□ -0.32
CREBRF-204ENST00000520464 ZEB1P37275 1124 aaPredicted RBP13.06□□□□□ -0.32
CREBRF-204ENST00000520464 NACADO15069 1562 aa13.03□□□□□ -0.32
CREBRF-204ENST00000520464 RB1CC1Q8TDY2 1594 aa13.03□□□□□ -0.32
CREBRF-204ENST00000520464 UBTFP17480 764 aaKnown RBP12.98□□□□□ -0.33
CREBRF-204ENST00000520464 EHMT2Q96KQ7 1210 aa12.95□□□□□ -0.34
CREBRF-204ENST00000520464 CHIC1Q5VXU3 224 aa12.91□□□□□ -0.34
CREBRF-204ENST00000520464 SCRIBQ14160 1630 aa12.87□□□□□ -0.35
CREBRF-204ENST00000520464 CENPBP07199 599 aaPredicted RBP12.86□□□□□ -0.35
CREBRF-204ENST00000520464 MYO15BQ96JP2 1530 aa12.83□□□□□ -0.36
CREBRF-204ENST00000520464 PABPN1Q86U42 306 aaKnown RBP eCLIP12.83□□□□□ -0.36
CREBRF-204ENST00000520464 PCGF6Q9BYE7 350 aa12.76□□□□□ -0.37
CREBRF-204ENST00000520464 TTBK1Q5TCY1 1321 aaPredicted RBP12.75□□□□□ -0.37
CREBRF-204ENST00000520464 TRIM26Q12899 539 aaPredicted RBP12.74□□□□□ -0.37
CREBRF-204ENST00000520464 ATP1B4Q9UN42 357 aaPredicted RBP12.7□□□□□ -0.38
CREBRF-204ENST00000520464 CCER1Q8TC90 406 aaPredicted RBP12.68□□□□□ -0.38
CREBRF-204ENST00000520464 RANGAP1P46060 587 aaPredicted RBP12.65□□□□□ -0.38
CREBRF-204ENST00000520464 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
CREBRF-204ENST00000520464 HRCP23327 699 aa12.54□□□□□ -0.4
CREBRF-204ENST00000520464 ERICH6Q7L0X2 663 aa12.53□□□□□ -0.4
CREBRF-204ENST00000520464 EEA1Q15075 1411 aa12.52□□□□□ -0.41
CREBRF-204ENST00000520464 RSF1Q96T23 1441 aaPredicted RBP12.52□□□□□ -0.41
CREBRF-204ENST00000520464 CSRNP3Q8WYN3 585 aa12.49□□□□□ -0.41
CREBRF-204ENST00000520464 BAZ1BQ9UIG0 1483 aaKnown RBP12.45□□□□□ -0.42
CREBRF-204ENST00000520464 LOC105371045A0A1W2PR82 267 aa12.45□□□□□ -0.42
CREBRF-204ENST00000520464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.44□□□□□ -0.42
CREBRF-204ENST00000520464 HNRNPUL2Q1KMD3 747 aaKnown RBP12.44□□□□□ -0.42
CREBRF-204ENST00000520464 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
CREBRF-204ENST00000520464 CDK11AQ9UQ88 783 aaPredicted RBP12.32□□□□□ -0.44
CREBRF-204ENST00000520464 YTHDC1Q96MU7 727 aaKnown RBP12.28□□□□□ -0.44
CREBRF-204ENST00000520464 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
CREBRF-204ENST00000520464 WRNQ14191 1432 aaPredicted RBP eCLIP12.27□□□□□ -0.44
CREBRF-204ENST00000520464 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
CREBRF-204ENST00000520464 GOLGA3Q08378 1498 aa12.24□□□□□ -0.45
CREBRF-204ENST00000520464 NEFLP07196 543 aa12.23□□□□□ -0.45
CREBRF-204ENST00000520464 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
CREBRF-204ENST00000520464 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
CREBRF-204ENST00000520464 KIF27Q86VH2 1401 aa12.22□□□□□ -0.45
CREBRF-204ENST00000520464 ITGAEP38570 1179 aa12.21□□□□□ -0.45
CREBRF-204ENST00000520464 FAM50AQ14320 339 aaKnown RBP12.21□□□□□ -0.46
CREBRF-204ENST00000520464 CECR2Q9BXF3 1484 aa12.2□□□□□ -0.46
CREBRF-204ENST00000520464 CEP164Q9UPV0 1460 aa12.19□□□□□ -0.46
CREBRF-204ENST00000520464 MROH2BQ7Z745 1585 aa12.16□□□□□ -0.46
CREBRF-204ENST00000520464 FBLN2P98095 1184 aa12.16□□□□□ -0.46
CREBRF-204ENST00000520464 TNIKQ9UKE5 1360 aa12.13□□□□□ -0.47
CREBRF-204ENST00000520464 SMARCA4P51532 1647 aa12.12□□□□□ -0.47
CREBRF-204ENST00000520464 CLIP1P30622 1438 aa12.12□□□□□ -0.47
CREBRF-204ENST00000520464 CLSPNQ9HAW4 1339 aa12.1□□□□□ -0.47
CREBRF-204ENST00000520464 PDS5BQ9NTI5 1447 aa12.1□□□□□ -0.47
CREBRF-204ENST00000520464 CCDC88BA6NC98 1476 aa12.09□□□□□ -0.47
CREBRF-204ENST00000520464 TRIM52Q96A61 297 aa12.08□□□□□ -0.47
CREBRF-204ENST00000520464 ATAD2BQ9ULI0 1458 aa12.05□□□□□ -0.48
CREBRF-204ENST00000520464 CHMP7Q8WUX9 453 aaPredicted RBP12.04□□□□□ -0.48
CREBRF-204ENST00000520464 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
CREBRF-204ENST00000520464 ABCC8Q09428 1581 aa12.03□□□□□ -0.48
CREBRF-204ENST00000520464 ERCC6Q03468 1493 aa12.02□□□□□ -0.48
CREBRF-204ENST00000520464 CEP162Q5TB80 1403 aa12.02□□□□□ -0.49
CREBRF-204ENST00000520464 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
CREBRF-204ENST00000520464 MTUS2Q5JR59 1369 aa11.99□□□□□ -0.49
CREBRF-204ENST00000520464 P3H3Q8IVL6 736 aa11.98□□□□□ -0.49
CREBRF-204ENST00000520464 WIZO95785 1651 aa11.98□□□□□ -0.49
CREBRF-204ENST00000520464 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
CREBRF-204ENST00000520464 DIEXFQ68CQ4 756 aaKnown RBP11.93□□□□□ -0.5
CREBRF-204ENST00000520464 CUX2O14529 1486 aa11.93□□□□□ -0.5
CREBRF-204ENST00000520464 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
CREBRF-204ENST00000520464 CARMIL1Q5VZK9 1371 aa11.92□□□□□ -0.5
CREBRF-204ENST00000520464 ZNF316A6NFI3 1004 aaPredicted RBP11.9□□□□□ -0.5
CREBRF-204ENST00000520464 TSPY4P0CV99 314 aa11.88□□□□□ -0.51
CREBRF-204ENST00000520464 TSPY10P0CW01 314 aa11.88□□□□□ -0.51
CREBRF-204ENST00000520464 POLR3GLQ9BT43 218 aa11.87□□□□□ -0.51
CREBRF-204ENST00000520464 ANP32CO43423 234 aa11.87□□□□□ -0.51
CREBRF-204ENST00000520464 TONSLQ96HA7 1378 aa11.87□□□□□ -0.51
CREBRF-204ENST00000520464 NEUROD1Q13562 356 aa11.87□□□□□ -0.51
CREBRF-204ENST00000520464 PLEKHD1A6NEE1 506 aa11.86□□□□□ -0.51
CREBRF-204ENST00000520464 RTL5Q5HYW3 569 aaPredicted RBP11.86□□□□□ -0.51
CREBRF-204ENST00000520464 SOGA1O94964 1423 aa11.85□□□□□ -0.51
CREBRF-204ENST00000520464 ZNF777Q9ULD5 760 aaPredicted RBP11.85□□□□□ -0.51
CREBRF-204ENST00000520464 HMGXB3Q12766 1538 aa11.84□□□□□ -0.51
CREBRF-204ENST00000520464 CARMIL2Q6F5E8 1435 aa11.83□□□□□ -0.52
CREBRF-204ENST00000520464 FMN1Q68DA7 1419 aa11.82□□□□□ -0.52
CREBRF-204ENST00000520464 VPS8Q8N3P4 1428 aa11.82□□□□□ -0.52
CREBRF-204ENST00000520464 EIF4G1Q04637 1599 aaKnown RBP11.82□□□□□ -0.52
CREBRF-204ENST00000520464 ESF1Q9H501 851 aaKnown RBP11.81□□□□□ -0.52
CREBRF-204ENST00000520464 GTF3C3Q9Y5Q9 886 aa11.8□□□□□ -0.52
CREBRF-204ENST00000520464 RAPGEF2Q9Y4G8 1499 aa11.8□□□□□ -0.52
CREBRF-204ENST00000520464 FANCD2Q9BXW9 1451 aa11.78□□□□□ -0.52
CREBRF-204ENST00000520464 DAXXQ9UER7 740 aaPredicted RBP11.77□□□□□ -0.52
CREBRF-204ENST00000520464 ARID3CA6NKF2 412 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms