RNA–Protein interactions for RNA: ENST00000587026.1

RDH13-206, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-206ENST00000587026 NISCHQ9Y2I1 1504 aa40.96■■■■■ 4.15
RDH13-206ENST00000587026 CCDC180Q9P1Z9 1646 aa36.63■■■■□ 3.45
RDH13-206ENST00000587026 ABCC9O60706 1549 aa36.05■■■■□ 3.36
RDH13-206ENST00000587026 RB1CC1Q8TDY2 1594 aa34.61■■■■□ 3.13
RDH13-206ENST00000587026 NACADO15069 1562 aa34.48■■■■□ 3.11
RDH13-206ENST00000587026 DCAF8L2P0C7V8 631 aa34.34■■■■□ 3.09
RDH13-206ENST00000587026 MYO15BQ96JP2 1530 aa34.15■■■■□ 3.06
RDH13-206ENST00000587026 ZCCHC6Q5VYS8 1495 aaKnown RBP34.05■■■■□ 3.04
RDH13-206ENST00000587026 UNC13AQ9UPW8 1703 aa33.9■■■■□ 3.02
RDH13-206ENST00000587026 DCAF1Q9Y4B6 1507 aa33.89■■■■□ 3.02
RDH13-206ENST00000587026 PABPN1Q86U42 306 aaKnown RBP eCLIP33.61■■■□□ 2.97
RDH13-206ENST00000587026 BICRAQ9NZM4 1560 aa33.53■■■□□ 2.96
RDH13-206ENST00000587026 SCRIBQ14160 1630 aa33.35■■■□□ 2.93
RDH13-206ENST00000587026 DNAJC5BQ9UF47 199 aa33.32■■■□□ 2.92
RDH13-206ENST00000587026 SHROOM4Q9ULL8 1493 aa33.17■■■□□ 2.9
RDH13-206ENST00000587026 EIF4G1Q04637 1599 aaKnown RBP32.69■■■□□ 2.82
RDH13-206ENST00000587026 CC2D2AQ9P2K1 1620 aa32.65■■■□□ 2.82
RDH13-206ENST00000587026 CECR2Q9BXF3 1484 aa32.43■■■□□ 2.78
RDH13-206ENST00000587026 SMARCA4P51532 1647 aa31.89■■■□□ 2.7
RDH13-206ENST00000587026 BAZ1AQ9NRL2 1556 aaPredicted RBP31.8■■■□□ 2.68
RDH13-206ENST00000587026 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
RDH13-206ENST00000587026 ATAD2BQ9ULI0 1458 aa31.74■■■□□ 2.67
RDH13-206ENST00000587026 SMARCA2P51531 1590 aa31.73■■■□□ 2.67
RDH13-206ENST00000587026 HMGXB3Q12766 1538 aa31.62■■■□□ 2.65
RDH13-206ENST00000587026 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
RDH13-206ENST00000587026 MROH2BQ7Z745 1585 aa31.56■■■□□ 2.64
RDH13-206ENST00000587026 BAZ1BQ9UIG0 1483 aaKnown RBP31.49■■■□□ 2.63
RDH13-206ENST00000587026 WIZO95785 1651 aa31.25■■■□□ 2.59
RDH13-206ENST00000587026 ERCC6Q03468 1493 aa31.13■■■□□ 2.57
RDH13-206ENST00000587026 NESP48681 1621 aa31.11■■■□□ 2.57
RDH13-206ENST00000587026 RSF1Q96T23 1441 aaPredicted RBP31.06■■■□□ 2.56
RDH13-206ENST00000587026 LAMC3Q9Y6N6 1575 aa31.05■■■□□ 2.56
RDH13-206ENST00000587026 CUX2O14529 1486 aa30.91■■■□□ 2.54
RDH13-206ENST00000587026 TOP2AP11388 1531 aaKnown RBP30.87■■■□□ 2.53
RDH13-206ENST00000587026 CADPSQ9ULU8 1353 aa30.83■■■□□ 2.53
RDH13-206ENST00000587026 KIF21AQ7Z4S6 1674 aa30.82■■■□□ 2.52
RDH13-206ENST00000587026 PDS5BQ9NTI5 1447 aa30.81■■■□□ 2.52
RDH13-206ENST00000587026 THOC2Q8NI27 1593 aaKnown RBP30.75■■■□□ 2.51
RDH13-206ENST00000587026 CFTRP13569 1480 aa30.58■■■□□ 2.49
RDH13-206ENST00000587026 MRC2Q9UBG0 1479 aa30.5■■■□□ 2.47
RDH13-206ENST00000587026 CEP164Q9UPV0 1460 aa30.5■■■□□ 2.47
RDH13-206ENST00000587026 PRDM2Q13029 1718 aa30.49■■■□□ 2.47
RDH13-206ENST00000587026 CCDC88BA6NC98 1476 aa30.49■■■□□ 2.47
RDH13-206ENST00000587026 FANCD2Q9BXW9 1451 aa30.49■■■□□ 2.47
RDH13-206ENST00000587026 WDR62O43379 1518 aa30.43■■■□□ 2.46
RDH13-206ENST00000587026 DNAJC5Q9H3Z4 198 aa30.29■■■□□ 2.44
RDH13-206ENST00000587026 URB2Q14146 1524 aaKnown RBP30.2■■■□□ 2.42
RDH13-206ENST00000587026 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
RDH13-206ENST00000587026 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
RDH13-206ENST00000587026 TOPBP1Q92547 1522 aa29.97■■■□□ 2.39
RDH13-206ENST00000587026 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
RDH13-206ENST00000587026 IFT140Q96RY7 1462 aa29.86■■■□□ 2.37
RDH13-206ENST00000587026 ZNF608Q9ULD9 1512 aaPredicted RBP29.73■■■□□ 2.35
RDH13-206ENST00000587026 POLA1P09884 1462 aaPredicted RBP29.69■■■□□ 2.34
RDH13-206ENST00000587026 TARBP1Q13395 1621 aaKnown RBP29.69■■■□□ 2.34
RDH13-206ENST00000587026 EIF4G3O43432 1585 aaKnown RBP29.65■■■□□ 2.34
RDH13-206ENST00000587026 CUX1P39880 1505 aa29.62■■■□□ 2.33
RDH13-206ENST00000587026 FGD5Q6ZNL6 1462 aa29.58■■■□□ 2.33
RDH13-206ENST00000587026 SOGA1O94964 1423 aa29.56■■■□□ 2.32
RDH13-206ENST00000587026 OSCARQ8IYS5 282 aa29.56■■■□□ 2.32
RDH13-206ENST00000587026 RAD54L2Q9Y4B4 1467 aa29.55■■■□□ 2.32
RDH13-206ENST00000587026 AQRO60306 1485 aaKnown RBP eCLIP29.53■■■□□ 2.32
RDH13-206ENST00000587026 WDR97A6NE52 1622 aa29.47■■■□□ 2.31
RDH13-206ENST00000587026 TDRD9Q8NDG6 1382 aaKnown RBP29.41■■■□□ 2.3
RDH13-206ENST00000587026 CHD1O14646 1710 aa29.4■■■□□ 2.3
RDH13-206ENST00000587026 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
RDH13-206ENST00000587026 TOP2BQ02880 1626 aa29.32■■■□□ 2.28
RDH13-206ENST00000587026 WRNQ14191 1432 aaPredicted RBP eCLIP29.32■■■□□ 2.28
RDH13-206ENST00000587026 SYNJ1O43426 1573 aa29.28■■■□□ 2.28
RDH13-206ENST00000587026 ABCA10Q8WWZ4 1543 aa29.28■■■□□ 2.28
RDH13-206ENST00000587026 PBRM1Q86U86 1689 aa29.28■■■□□ 2.28
RDH13-206ENST00000587026 GRIN2BQ13224 1484 aa29.26■■■□□ 2.27
RDH13-206ENST00000587026 SNAPC4Q5SXM2 1469 aa29.26■■■□□ 2.27
RDH13-206ENST00000587026 FBLN2P98095 1184 aa29.25■■■□□ 2.27
RDH13-206ENST00000587026 GAPVD1Q14C86 1478 aa29.23■■■□□ 2.27
RDH13-206ENST00000587026 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
RDH13-206ENST00000587026 ABCA5Q8WWZ7 1642 aa29.22■■■□□ 2.27
RDH13-206ENST00000587026 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
RDH13-206ENST00000587026 RIMBP3CA6NJZ7 1639 aa29.16■■■□□ 2.26
RDH13-206ENST00000587026 RIMBP3BA6NNM3 1639 aa29.16■■■□□ 2.26
RDH13-206ENST00000587026 RIMBP3Q9UFD9 1639 aa29.16■■■□□ 2.26
RDH13-206ENST00000587026 CHMP7Q8WUX9 453 aaPredicted RBP29.12■■■□□ 2.25
RDH13-206ENST00000587026 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
RDH13-206ENST00000587026 ARHGEF11O15085 1522 aa29.1■■■□□ 2.25
RDH13-206ENST00000587026 CLASP1Q7Z460 1538 aa28.99■■■□□ 2.23
RDH13-206ENST00000587026 ADAMTS12P58397 1594 aa28.96■■■□□ 2.23
RDH13-206ENST00000587026 ERICH3Q5RHP9 1530 aa28.94■■■□□ 2.22
RDH13-206ENST00000587026 GRIN2AQ12879 1464 aa28.89■■■□□ 2.22
RDH13-206ENST00000587026 FHAD1B1AJZ9 1412 aa28.87■■■□□ 2.21
RDH13-206ENST00000587026 ARAP1Q96P48 1450 aa28.82■■■□□ 2.2
RDH13-206ENST00000587026 CYB5RLQ6IPT4 315 aa28.81■■■□□ 2.2
RDH13-206ENST00000587026 CEP170Q5SW79 1584 aa28.76■■■□□ 2.19
RDH13-206ENST00000587026 NUP160Q12769 1436 aa28.76■■■□□ 2.19
RDH13-206ENST00000587026 KIF27Q86VH2 1401 aa28.74■■■□□ 2.19
RDH13-206ENST00000587026 CUL7Q14999 1698 aa28.66■■■□□ 2.18
RDH13-206ENST00000587026 IGF1RP08069 1367 aa28.62■■■□□ 2.17
RDH13-206ENST00000587026 SHROOM2Q13796 1616 aa28.62■■■□□ 2.17
RDH13-206ENST00000587026 ERCC6L2Q5T890 1561 aa28.55■■■□□ 2.16
RDH13-206ENST00000587026 RUSC2Q8N2Y8 1516 aa28.53■■■□□ 2.16
RDH13-206ENST00000587026 CARMIL1Q5VZK9 1371 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms