RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 NISCHQ9Y2I1 1504 aa53.16■■■■■ 6.1
SNUPN-201ENST00000308588 CCDC180Q9P1Z9 1646 aa47.04■■■■■ 5.12
SNUPN-201ENST00000308588 ABCC9O60706 1549 aa45.77■■■■■ 4.92
SNUPN-201ENST00000308588 ZCCHC6Q5VYS8 1495 aaKnown RBP44.34■■■■■ 4.69
SNUPN-201ENST00000308588 DCAF8L2P0C7V8 631 aa44.3■■■■■ 4.68
SNUPN-201ENST00000308588 NACADO15069 1562 aa44.18■■■■■ 4.66
SNUPN-201ENST00000308588 RB1CC1Q8TDY2 1594 aa44.14■■■■■ 4.66
SNUPN-201ENST00000308588 MYO15BQ96JP2 1530 aa44.04■■■■■ 4.64
SNUPN-201ENST00000308588 DCAF1Q9Y4B6 1507 aa43.98■■■■■ 4.63
SNUPN-201ENST00000308588 UNC13AQ9UPW8 1703 aa43.15■■■■■ 4.5
SNUPN-201ENST00000308588 SCRIBQ14160 1630 aa42.99■■■■■ 4.47
SNUPN-201ENST00000308588 PABPN1Q86U42 306 aaKnown RBP eCLIP42.87■■■■■ 4.45
SNUPN-201ENST00000308588 BICRAQ9NZM4 1560 aa42.84■■■■■ 4.45
SNUPN-201ENST00000308588 SHROOM4Q9ULL8 1493 aa42.35■■■■■ 4.37
SNUPN-201ENST00000308588 DNAJC5BQ9UF47 199 aa41.79■■■■■ 4.28
SNUPN-201ENST00000308588 EIF4G1Q04637 1599 aaKnown RBP41.66■■■■■ 4.26
SNUPN-201ENST00000308588 CECR2Q9BXF3 1484 aa41.41■■■■■ 4.22
SNUPN-201ENST00000308588 CC2D2AQ9P2K1 1620 aa41.41■■■■■ 4.22
SNUPN-201ENST00000308588 SMARCA4P51532 1647 aa41.16■■■■■ 4.18
SNUPN-201ENST00000308588 BAZ1AQ9NRL2 1556 aaPredicted RBP41.15■■■■■ 4.18
SNUPN-201ENST00000308588 MROH2BQ7Z745 1585 aa40.99■■■■■ 4.15
SNUPN-201ENST00000308588 ATAD2BQ9ULI0 1458 aa40.88■■■■■ 4.13
SNUPN-201ENST00000308588 NCAPD3P42695 1498 aa40.8■■■■■ 4.12
SNUPN-201ENST00000308588 SMARCA2P51531 1590 aa40.8■■■■■ 4.12
SNUPN-201ENST00000308588 PEG3Q9GZU2 1588 aa40.75■■■■■ 4.11
SNUPN-201ENST00000308588 RSF1Q96T23 1441 aaPredicted RBP40.66■■■■■ 4.1
SNUPN-201ENST00000308588 HMGXB3Q12766 1538 aa40.59■■■■■ 4.09
SNUPN-201ENST00000308588 WIZO95785 1651 aa40.55■■■■■ 4.08
SNUPN-201ENST00000308588 BAZ1BQ9UIG0 1483 aaKnown RBP40.53■■■■■ 4.08
SNUPN-201ENST00000308588 TOP2AP11388 1531 aaKnown RBP40.12■■■■■ 4.01
SNUPN-201ENST00000308588 SUPT5HO00267 1087 aaKnown RBP39.89■■■■□ 3.98
SNUPN-201ENST00000308588 NESP48681 1621 aa39.73■■■■□ 3.95
SNUPN-201ENST00000308588 CCDC88BA6NC98 1476 aa39.68■■■■□ 3.94
SNUPN-201ENST00000308588 CADPSQ9ULU8 1353 aa39.64■■■■□ 3.94
SNUPN-201ENST00000308588 LAMC3Q9Y6N6 1575 aa39.63■■■■□ 3.93
SNUPN-201ENST00000308588 CFTRP13569 1480 aa39.47■■■■□ 3.91
SNUPN-201ENST00000308588 ERCC6Q03468 1493 aa39.39■■■■□ 3.9
SNUPN-201ENST00000308588 PDS5BQ9NTI5 1447 aa39.37■■■■□ 3.89
SNUPN-201ENST00000308588 KIF21AQ7Z4S6 1674 aa39.22■■■■□ 3.87
SNUPN-201ENST00000308588 FANCD2Q9BXW9 1451 aa39.16■■■■□ 3.86
SNUPN-201ENST00000308588 PRDM2Q13029 1718 aa39.11■■■■□ 3.85
SNUPN-201ENST00000308588 CEP164Q9UPV0 1460 aa39.06■■■■□ 3.84
SNUPN-201ENST00000308588 THOC2Q8NI27 1593 aaKnown RBP39.01■■■■□ 3.84
SNUPN-201ENST00000308588 MRC2Q9UBG0 1479 aa38.94■■■■□ 3.82
SNUPN-201ENST00000308588 CUX2O14529 1486 aa38.85■■■■□ 3.81
SNUPN-201ENST00000308588 WDR62O43379 1518 aa38.8■■■■□ 3.8
SNUPN-201ENST00000308588 URB2Q14146 1524 aaKnown RBP38.77■■■■□ 3.8
SNUPN-201ENST00000308588 TOPBP1Q92547 1522 aa38.58■■■■□ 3.77
SNUPN-201ENST00000308588 ABCC8Q09428 1581 aa38.56■■■■□ 3.76
SNUPN-201ENST00000308588 DNMBPQ6XZF7 1577 aa38.54■■■■□ 3.76
SNUPN-201ENST00000308588 CUX1P39880 1505 aa38.42■■■■□ 3.74
SNUPN-201ENST00000308588 WRNQ14191 1432 aaPredicted RBP eCLIP38.3■■■■□ 3.72
SNUPN-201ENST00000308588 POLA1P09884 1462 aaPredicted RBP38.28■■■■□ 3.72
SNUPN-201ENST00000308588 FGD5Q6ZNL6 1462 aa38.23■■■■□ 3.71
SNUPN-201ENST00000308588 IFT140Q96RY7 1462 aa38.23■■■■□ 3.71
SNUPN-201ENST00000308588 SYNJ1O43426 1573 aa38.19■■■■□ 3.7
SNUPN-201ENST00000308588 TOP2BQ02880 1626 aa38.16■■■■□ 3.7
SNUPN-201ENST00000308588 BIVM-ERCC5R4GMW8 1640 aa38.14■■■■□ 3.7
SNUPN-201ENST00000308588 SOGA1O94964 1423 aa38.14■■■■□ 3.7
SNUPN-201ENST00000308588 RAD54L2Q9Y4B4 1467 aa38.13■■■■□ 3.69
SNUPN-201ENST00000308588 TARBP1Q13395 1621 aaKnown RBP38.13■■■■□ 3.69
SNUPN-201ENST00000308588 ZNF608Q9ULD9 1512 aaPredicted RBP38.07■■■■□ 3.69
SNUPN-201ENST00000308588 AQRO60306 1485 aaKnown RBP eCLIP37.91■■■■□ 3.66
SNUPN-201ENST00000308588 TDRD9Q8NDG6 1382 aaKnown RBP37.89■■■■□ 3.66
SNUPN-201ENST00000308588 EIF4G3O43432 1585 aaKnown RBP37.89■■■■□ 3.66
SNUPN-201ENST00000308588 ABCA10Q8WWZ4 1543 aa37.88■■■■□ 3.65
SNUPN-201ENST00000308588 WDR97A6NE52 1622 aa37.87■■■■□ 3.65
SNUPN-201ENST00000308588 GAPVD1Q14C86 1478 aa37.69■■■■□ 3.62
SNUPN-201ENST00000308588 ABCA5Q8WWZ7 1642 aa37.68■■■■□ 3.62
SNUPN-201ENST00000308588 TRIM41Q8WV44 630 aa37.64■■■■□ 3.62
SNUPN-201ENST00000308588 GRIN2BQ13224 1484 aa37.62■■■■□ 3.61
SNUPN-201ENST00000308588 PBRM1Q86U86 1689 aa37.54■■■■□ 3.6
SNUPN-201ENST00000308588 SNAPC4Q5SXM2 1469 aa37.54■■■■□ 3.6
SNUPN-201ENST00000308588 MAGI1Q96QZ7 1491 aaPredicted RBP37.48■■■■□ 3.59
SNUPN-201ENST00000308588 KIF27Q86VH2 1401 aa37.46■■■■□ 3.59
SNUPN-201ENST00000308588 CHIC1Q5VXU3 224 aa37.45■■■■□ 3.59
SNUPN-201ENST00000308588 ERICH3Q5RHP9 1530 aa37.41■■■■□ 3.58
SNUPN-201ENST00000308588 FBLN2P98095 1184 aa37.37■■■■□ 3.57
SNUPN-201ENST00000308588 OSCARQ8IYS5 282 aa37.36■■■■□ 3.57
SNUPN-201ENST00000308588 SYNJ2O15056 1496 aa37.34■■■■□ 3.57
SNUPN-201ENST00000308588 CHD1O14646 1710 aa37.34■■■■□ 3.57
SNUPN-201ENST00000308588 CHMP7Q8WUX9 453 aaPredicted RBP37.32■■■■□ 3.57
SNUPN-201ENST00000308588 DNAJC5Q9H3Z4 198 aa37.32■■■■□ 3.57
SNUPN-201ENST00000308588 IGF1RP08069 1367 aa37.32■■■■□ 3.57
SNUPN-201ENST00000308588 ADAMTS12P58397 1594 aa37.29■■■■□ 3.56
SNUPN-201ENST00000308588 RUSC2Q8N2Y8 1516 aa37.29■■■■□ 3.56
SNUPN-201ENST00000308588 FHAD1B1AJZ9 1412 aa37.26■■■■□ 3.56
SNUPN-201ENST00000308588 GRIN2AQ12879 1464 aa37.15■■■■□ 3.54
SNUPN-201ENST00000308588 CUL7Q14999 1698 aa37.11■■■■□ 3.53
SNUPN-201ENST00000308588 CARMIL1Q5VZK9 1371 aa37.08■■■■□ 3.53
SNUPN-201ENST00000308588 NUP160Q12769 1436 aa36.98■■■■□ 3.51
SNUPN-201ENST00000308588 CLASP1Q7Z460 1538 aa36.97■■■■□ 3.51
SNUPN-201ENST00000308588 EEA1Q15075 1411 aa36.95■■■■□ 3.51
SNUPN-201ENST00000308588 CEP170Q5SW79 1584 aa36.95■■■■□ 3.51
SNUPN-201ENST00000308588 CSRNP3Q8WYN3 585 aa36.91■■■■□ 3.5
SNUPN-201ENST00000308588 RAPGEF2Q9Y4G8 1499 aa36.88■■■■□ 3.49
SNUPN-201ENST00000308588 FAM9AQ8IZU1 332 aaPredicted RBP36.87■■■■□ 3.49
SNUPN-201ENST00000308588 PRXQ9BXM0 1461 aa36.86■■■■□ 3.49
SNUPN-201ENST00000308588 ARHGEF11O15085 1522 aa36.73■■■■□ 3.47
SNUPN-201ENST00000308588 KIAA0586Q9BVV6 1533 aa36.71■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms