RNA–Protein interactions for RNA: ENST00000398545.4

CFAP53-201, Transcript of cilia and flagella associated protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFAP53, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53-201ENST00000398545 NISCHQ9Y2I1 1504 aa31.4■■■□□ 2.62
CFAP53-201ENST00000398545 CCDC180Q9P1Z9 1646 aa26.91■■□□□ 1.9
CFAP53-201ENST00000398545 ZCCHC6Q5VYS8 1495 aaKnown RBP26.65■■□□□ 1.86
CFAP53-201ENST00000398545 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
CFAP53-201ENST00000398545 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
CFAP53-201ENST00000398545 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
CFAP53-201ENST00000398545 CHIC1Q5VXU3 224 aa25.56■■□□□ 1.68
CFAP53-201ENST00000398545 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
CFAP53-201ENST00000398545 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
CFAP53-201ENST00000398545 ABCC9O60706 1549 aa25.24■■□□□ 1.63
CFAP53-201ENST00000398545 HRCP23327 699 aa25.15■■□□□ 1.62
CFAP53-201ENST00000398545 SCRIBQ14160 1630 aa24.88■■□□□ 1.57
CFAP53-201ENST00000398545 PCGF6Q9BYE7 350 aa24.82■■□□□ 1.56
CFAP53-201ENST00000398545 RSF1Q96T23 1441 aaPredicted RBP24.8■■□□□ 1.56
CFAP53-201ENST00000398545 RB1CC1Q8TDY2 1594 aa24.74■■□□□ 1.55
CFAP53-201ENST00000398545 NACADO15069 1562 aa24.69■■□□□ 1.54
CFAP53-201ENST00000398545 LOC105371045A0A1W2PR82 267 aa24.61■■□□□ 1.53
CFAP53-201ENST00000398545 TRIM26Q12899 539 aaPredicted RBP24.52■■□□□ 1.52
CFAP53-201ENST00000398545 TRIM41Q8WV44 630 aa24.36■■□□□ 1.49
CFAP53-201ENST00000398545 MROH2BQ7Z745 1585 aa24.31■■□□□ 1.48
CFAP53-201ENST00000398545 PPARGC1BQ86YN6 1023 aaKnown RBP24.3■■□□□ 1.48
CFAP53-201ENST00000398545 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
CFAP53-201ENST00000398545 CECR2Q9BXF3 1484 aa24.28■■□□□ 1.48
CFAP53-201ENST00000398545 WIZO95785 1651 aa24.24■■□□□ 1.47
CFAP53-201ENST00000398545 ZEB1P37275 1124 aaPredicted RBP24.21■■□□□ 1.47
CFAP53-201ENST00000398545 EIF4G1Q04637 1599 aaKnown RBP24.18■■□□□ 1.46
CFAP53-201ENST00000398545 TOP2AP11388 1531 aaKnown RBP23.99■■□□□ 1.43
CFAP53-201ENST00000398545 FAM9AQ8IZU1 332 aaPredicted RBP23.95■■□□□ 1.42
CFAP53-201ENST00000398545 SMARCA4P51532 1647 aa23.94■■□□□ 1.42
CFAP53-201ENST00000398545 UNC13AQ9UPW8 1703 aa23.94■■□□□ 1.42
CFAP53-201ENST00000398545 SMARCA2P51531 1590 aa23.81■■□□□ 1.4
CFAP53-201ENST00000398545 CCDC88BA6NC98 1476 aa23.72■■□□□ 1.39
CFAP53-201ENST00000398545 WRNQ14191 1432 aaPredicted RBP eCLIP23.69■■□□□ 1.38
CFAP53-201ENST00000398545 ABCC8Q09428 1581 aa23.68■■□□□ 1.38
CFAP53-201ENST00000398545 EEA1Q15075 1411 aa23.66■■□□□ 1.38
CFAP53-201ENST00000398545 PEG3Q9GZU2 1588 aa23.58■■□□□ 1.37
CFAP53-201ENST00000398545 EHMT2Q96KQ7 1210 aa23.56■■□□□ 1.36
CFAP53-201ENST00000398545 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
CFAP53-201ENST00000398545 CEP162Q5TB80 1403 aa23.5■■□□□ 1.35
CFAP53-201ENST00000398545 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
CFAP53-201ENST00000398545 SOGA1O94964 1423 aa23.41■■□□□ 1.34
CFAP53-201ENST00000398545 GOLGA3Q08378 1498 aa23.39■■□□□ 1.33
CFAP53-201ENST00000398545 KIF21BO75037 1637 aa23.35■■□□□ 1.33
CFAP53-201ENST00000398545 CCER1Q8TC90 406 aaPredicted RBP23.33■■□□□ 1.33
CFAP53-201ENST00000398545 CSRNP3Q8WYN3 585 aa23.32■■□□□ 1.32
CFAP53-201ENST00000398545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.29■■□□□ 1.32
CFAP53-201ENST00000398545 RUSC2Q8N2Y8 1516 aa23.26■■□□□ 1.31
CFAP53-201ENST00000398545 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
CFAP53-201ENST00000398545 PELP1Q8IZL8 1130 aaKnown RBP23.24■■□□□ 1.31
CFAP53-201ENST00000398545 SYNJ1O43426 1573 aa23.24■■□□□ 1.31
CFAP53-201ENST00000398545 BAZ1BQ9UIG0 1483 aaKnown RBP23.18■■□□□ 1.3
CFAP53-201ENST00000398545 ATAD2BQ9ULI0 1458 aa23.16■■□□□ 1.3
CFAP53-201ENST00000398545 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
CFAP53-201ENST00000398545 UBTFP17480 764 aaKnown RBP23.13■■□□□ 1.29
CFAP53-201ENST00000398545 TOP2BQ02880 1626 aa23.06■■□□□ 1.28
CFAP53-201ENST00000398545 BIVM-ERCC5R4GMW8 1640 aa23.05■■□□□ 1.28
CFAP53-201ENST00000398545 PABPN1Q86U42 306 aaKnown RBP eCLIP23.03■■□□□ 1.28
CFAP53-201ENST00000398545 CLIP1P30622 1438 aa23.03■■□□□ 1.28
CFAP53-201ENST00000398545 VPS8Q8N3P4 1428 aa23.03■■□□□ 1.28
CFAP53-201ENST00000398545 DIEXFQ68CQ4 756 aaKnown RBP23.02■■□□□ 1.28
CFAP53-201ENST00000398545 ACIN1Q9UKV3 1341 aaKnown RBP22.99■■□□□ 1.27
CFAP53-201ENST00000398545 ERICH3Q5RHP9 1530 aa22.95■■□□□ 1.26
CFAP53-201ENST00000398545 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
CFAP53-201ENST00000398545 TTBK1Q5TCY1 1321 aaPredicted RBP22.92■■□□□ 1.26
CFAP53-201ENST00000398545 RAPGEF2Q9Y4G8 1499 aa22.91■■□□□ 1.26
CFAP53-201ENST00000398545 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
CFAP53-201ENST00000398545 ZNF316A6NFI3 1004 aaPredicted RBP22.85■■□□□ 1.25
CFAP53-201ENST00000398545 NEUROD1Q13562 356 aa22.83■■□□□ 1.24
CFAP53-201ENST00000398545 PRXQ9BXM0 1461 aa22.78■■□□□ 1.24
CFAP53-201ENST00000398545 PRDM2Q13029 1718 aa22.77■■□□□ 1.24
CFAP53-201ENST00000398545 APLP2Q06481 763 aa22.77■■□□□ 1.24
CFAP53-201ENST00000398545 NCAPD3P42695 1498 aa22.74■■□□□ 1.23
CFAP53-201ENST00000398545 CLSPNQ9HAW4 1339 aa22.69■■□□□ 1.22
CFAP53-201ENST00000398545 ARAP1Q96P48 1450 aa22.68■■□□□ 1.22
CFAP53-201ENST00000398545 CUX1P39880 1505 aa22.66■■□□□ 1.22
CFAP53-201ENST00000398545 HNRNPUL2Q1KMD3 747 aaKnown RBP22.66■■□□□ 1.22
CFAP53-201ENST00000398545 GTF3C3Q9Y5Q9 886 aa22.62■■□□□ 1.21
CFAP53-201ENST00000398545 KIF27Q86VH2 1401 aa22.61■■□□□ 1.21
CFAP53-201ENST00000398545 CFTRP13569 1480 aa22.59■■□□□ 1.21
CFAP53-201ENST00000398545 RRBP1Q9P2E9 1410 aaKnown RBP22.55■■□□□ 1.2
CFAP53-201ENST00000398545 CUX2O14529 1486 aa22.53■■□□□ 1.2
CFAP53-201ENST00000398545 DHX57Q6P158 1386 aaKnown RBP22.49■■□□□ 1.19
CFAP53-201ENST00000398545 MAP3K1Q13233 1512 aa22.45■■□□□ 1.18
CFAP53-201ENST00000398545 ARHGAP35Q9NRY4 1499 aa22.44■■□□□ 1.18
CFAP53-201ENST00000398545 MIER1Q8N108 512 aa22.43■■□□□ 1.18
CFAP53-201ENST00000398545 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
CFAP53-201ENST00000398545 KANK4Q5T7N3 995 aaPredicted RBP22.34■■□□□ 1.17
CFAP53-201ENST00000398545 TIAM1Q13009 1591 aa22.34■■□□□ 1.17
CFAP53-201ENST00000398545 CCNB3Q8WWL7 1395 aa22.34■■□□□ 1.17
CFAP53-201ENST00000398545 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
CFAP53-201ENST00000398545 YTHDC1Q96MU7 727 aaKnown RBP22.28■■□□□ 1.16
CFAP53-201ENST00000398545 IGF1RP08069 1367 aa22.24■■□□□ 1.15
CFAP53-201ENST00000398545 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
CFAP53-201ENST00000398545 FGD5Q6ZNL6 1462 aa22.21■■□□□ 1.15
CFAP53-201ENST00000398545 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
CFAP53-201ENST00000398545 MYT1Q01538 1121 aa22.19■■□□□ 1.14
CFAP53-201ENST00000398545 LRRC9Q6ZRR7 1453 aa22.18■■□□□ 1.14
CFAP53-201ENST00000398545 CARMIL1Q5VZK9 1371 aa22.17■■□□□ 1.14
CFAP53-201ENST00000398545 MAPKBP1O60336 1514 aa22.15■■□□□ 1.14
CFAP53-201ENST00000398545 CC2D2AQ9P2K1 1620 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 292.1 ms