RNA–Protein interactions for RNA: ENST00000568162.5

SNUPN-210, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-210ENST00000568162 NISCHQ9Y2I1 1504 aa36.38■■■■□ 3.41
SNUPN-210ENST00000568162 CCDC180Q9P1Z9 1646 aa31.8■■■□□ 2.68
SNUPN-210ENST00000568162 ZCCHC6Q5VYS8 1495 aaKnown RBP30.66■■■□□ 2.5
SNUPN-210ENST00000568162 DCAF1Q9Y4B6 1507 aa30.21■■■□□ 2.43
SNUPN-210ENST00000568162 MYO15BQ96JP2 1530 aa29.8■■■□□ 2.36
SNUPN-210ENST00000568162 DCAF8L2P0C7V8 631 aa29.6■■■□□ 2.33
SNUPN-210ENST00000568162 ABCC9O60706 1549 aa29.59■■■□□ 2.33
SNUPN-210ENST00000568162 SHROOM4Q9ULL8 1493 aa29.56■■■□□ 2.32
SNUPN-210ENST00000568162 NACADO15069 1562 aa29.48■■■□□ 2.31
SNUPN-210ENST00000568162 RB1CC1Q8TDY2 1594 aa29.17■■■□□ 2.26
SNUPN-210ENST00000568162 SCRIBQ14160 1630 aa29.08■■■□□ 2.25
SNUPN-210ENST00000568162 UNC13AQ9UPW8 1703 aa28.58■■■□□ 2.17
SNUPN-210ENST00000568162 SUPT5HO00267 1087 aaKnown RBP28.49■■■□□ 2.15
SNUPN-210ENST00000568162 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
SNUPN-210ENST00000568162 RSF1Q96T23 1441 aaPredicted RBP28.23■■■□□ 2.11
SNUPN-210ENST00000568162 CECR2Q9BXF3 1484 aa28.14■■■□□ 2.09
SNUPN-210ENST00000568162 BAZ1AQ9NRL2 1556 aaPredicted RBP28.12■■■□□ 2.09
SNUPN-210ENST00000568162 MROH2BQ7Z745 1585 aa28.06■■■□□ 2.08
SNUPN-210ENST00000568162 SMARCA4P51532 1647 aa27.96■■■□□ 2.07
SNUPN-210ENST00000568162 WIZO95785 1651 aa27.85■■■□□ 2.05
SNUPN-210ENST00000568162 PABPN1Q86U42 306 aaKnown RBP eCLIP27.81■■■□□ 2.04
SNUPN-210ENST00000568162 TOP2AP11388 1531 aaKnown RBP27.67■■■□□ 2.02
SNUPN-210ENST00000568162 PEG3Q9GZU2 1588 aa27.67■■■□□ 2.02
SNUPN-210ENST00000568162 CHIC1Q5VXU3 224 aa27.49■■□□□ 1.99
SNUPN-210ENST00000568162 SMARCA2P51531 1590 aa27.46■■□□□ 1.99
SNUPN-210ENST00000568162 ATAD2BQ9ULI0 1458 aa27.39■■□□□ 1.98
SNUPN-210ENST00000568162 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
SNUPN-210ENST00000568162 CCDC88BA6NC98 1476 aa27.26■■□□□ 1.95
SNUPN-210ENST00000568162 BAZ1BQ9UIG0 1483 aaKnown RBP27.25■■□□□ 1.95
SNUPN-210ENST00000568162 HMGXB3Q12766 1538 aa27.22■■□□□ 1.95
SNUPN-210ENST00000568162 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
SNUPN-210ENST00000568162 CC2D2AQ9P2K1 1620 aa26.88■■□□□ 1.89
SNUPN-210ENST00000568162 TRIM41Q8WV44 630 aa26.86■■□□□ 1.89
SNUPN-210ENST00000568162 ABCC8Q09428 1581 aa26.74■■□□□ 1.87
SNUPN-210ENST00000568162 PRDM2Q13029 1718 aa26.65■■□□□ 1.86
SNUPN-210ENST00000568162 WRNQ14191 1432 aaPredicted RBP eCLIP26.59■■□□□ 1.85
SNUPN-210ENST00000568162 CFTRP13569 1480 aa26.59■■□□□ 1.85
SNUPN-210ENST00000568162 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
SNUPN-210ENST00000568162 BIVM-ERCC5R4GMW8 1640 aa26.46■■□□□ 1.83
SNUPN-210ENST00000568162 TOP2BQ02880 1626 aa26.43■■□□□ 1.82
SNUPN-210ENST00000568162 EEA1Q15075 1411 aa26.43■■□□□ 1.82
SNUPN-210ENST00000568162 CADPSQ9ULU8 1353 aa26.4■■□□□ 1.82
SNUPN-210ENST00000568162 LOC105371045A0A1W2PR82 267 aa26.3■■□□□ 1.8
SNUPN-210ENST00000568162 LAMC3Q9Y6N6 1575 aa26.25■■□□□ 1.79
SNUPN-210ENST00000568162 CUX1P39880 1505 aa26.25■■□□□ 1.79
SNUPN-210ENST00000568162 FAM9AQ8IZU1 332 aaPredicted RBP26.25■■□□□ 1.79
SNUPN-210ENST00000568162 SOGA1O94964 1423 aa26.23■■□□□ 1.79
SNUPN-210ENST00000568162 FANCD2Q9BXW9 1451 aa26.14■■□□□ 1.78
SNUPN-210ENST00000568162 RUSC2Q8N2Y8 1516 aa26.1■■□□□ 1.77
SNUPN-210ENST00000568162 KIF21BO75037 1637 aa26.09■■□□□ 1.77
SNUPN-210ENST00000568162 NESP48681 1621 aa26.04■■□□□ 1.76
SNUPN-210ENST00000568162 CSRNP3Q8WYN3 585 aa26.04■■□□□ 1.76
SNUPN-210ENST00000568162 DNMBPQ6XZF7 1577 aa26.03■■□□□ 1.76
SNUPN-210ENST00000568162 GOLGA3Q08378 1498 aa26.01■■□□□ 1.75
SNUPN-210ENST00000568162 CEP164Q9UPV0 1460 aa26■■□□□ 1.75
SNUPN-210ENST00000568162 PDS5BQ9NTI5 1447 aa25.95■■□□□ 1.74
SNUPN-210ENST00000568162 TNIKQ9UKE5 1360 aa25.93■■□□□ 1.74
SNUPN-210ENST00000568162 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
SNUPN-210ENST00000568162 KIF27Q86VH2 1401 aa25.91■■□□□ 1.74
SNUPN-210ENST00000568162 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
SNUPN-210ENST00000568162 ERICH3Q5RHP9 1530 aa25.88■■□□□ 1.73
SNUPN-210ENST00000568162 KIF21AQ7Z4S6 1674 aa25.86■■□□□ 1.73
SNUPN-210ENST00000568162 DNAJC5BQ9UF47 199 aa25.85■■□□□ 1.73
SNUPN-210ENST00000568162 PRXQ9BXM0 1461 aa25.81■■□□□ 1.72
SNUPN-210ENST00000568162 URB2Q14146 1524 aaKnown RBP25.8■■□□□ 1.72
SNUPN-210ENST00000568162 CEP162Q5TB80 1403 aa25.79■■□□□ 1.72
SNUPN-210ENST00000568162 EHMT2Q96KQ7 1210 aa25.77■■□□□ 1.72
SNUPN-210ENST00000568162 CUX2O14529 1486 aa25.77■■□□□ 1.72
SNUPN-210ENST00000568162 POLA1P09884 1462 aaPredicted RBP25.77■■□□□ 1.72
SNUPN-210ENST00000568162 ABCA10Q8WWZ4 1543 aa25.76■■□□□ 1.71
SNUPN-210ENST00000568162 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
SNUPN-210ENST00000568162 RAPGEF2Q9Y4G8 1499 aa25.73■■□□□ 1.71
SNUPN-210ENST00000568162 UBTFP17480 764 aaKnown RBP25.66■■□□□ 1.7
SNUPN-210ENST00000568162 MRC2Q9UBG0 1479 aa25.65■■□□□ 1.7
SNUPN-210ENST00000568162 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
SNUPN-210ENST00000568162 IGF1RP08069 1367 aa25.58■■□□□ 1.69
SNUPN-210ENST00000568162 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
SNUPN-210ENST00000568162 CUL7Q14999 1698 aa25.58■■□□□ 1.68
SNUPN-210ENST00000568162 WDR62O43379 1518 aa25.55■■□□□ 1.68
SNUPN-210ENST00000568162 CLIP1P30622 1438 aa25.54■■□□□ 1.68
SNUPN-210ENST00000568162 TARBP1Q13395 1621 aaKnown RBP25.53■■□□□ 1.68
SNUPN-210ENST00000568162 CARMIL1Q5VZK9 1371 aa25.48■■□□□ 1.67
SNUPN-210ENST00000568162 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
SNUPN-210ENST00000568162 TRIM26Q12899 539 aaPredicted RBP25.42■■□□□ 1.66
SNUPN-210ENST00000568162 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
SNUPN-210ENST00000568162 VPS8Q8N3P4 1428 aa25.39■■□□□ 1.66
SNUPN-210ENST00000568162 ERCC6Q03468 1493 aa25.39■■□□□ 1.65
SNUPN-210ENST00000568162 IFT140Q96RY7 1462 aa25.37■■□□□ 1.65
SNUPN-210ENST00000568162 PBRM1Q86U86 1689 aa25.36■■□□□ 1.65
SNUPN-210ENST00000568162 PCGF6Q9BYE7 350 aa25.34■■□□□ 1.65
SNUPN-210ENST00000568162 CTTNBP2Q8WZ74 1663 aa25.31■■□□□ 1.64
SNUPN-210ENST00000568162 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
SNUPN-210ENST00000568162 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
SNUPN-210ENST00000568162 ARHGAP35Q9NRY4 1499 aa25.24■■□□□ 1.63
SNUPN-210ENST00000568162 ADAMTS12P58397 1594 aa25.23■■□□□ 1.63
SNUPN-210ENST00000568162 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
SNUPN-210ENST00000568162 EFCAB5A4FU69 1503 aa25.19■■□□□ 1.62
SNUPN-210ENST00000568162 FHAD1B1AJZ9 1412 aa25.16■■□□□ 1.62
SNUPN-210ENST00000568162 EIF4G3O43432 1585 aaKnown RBP25.16■■□□□ 1.62
SNUPN-210ENST00000568162 AQRO60306 1485 aaKnown RBP eCLIP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms