RNA–Protein interactions for RNA: ENST00000484316.5

NSMF-210, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

TSL 3

Gene NSMF, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-210ENST00000484316 NISCHQ9Y2I1 1504 aa40.83■■■■■ 4.13
NSMF-210ENST00000484316 CCDC180Q9P1Z9 1646 aa36.41■■■■□ 3.42
NSMF-210ENST00000484316 ABCC9O60706 1549 aa36.16■■■■□ 3.38
NSMF-210ENST00000484316 RB1CC1Q8TDY2 1594 aa34.53■■■■□ 3.12
NSMF-210ENST00000484316 DCAF8L2P0C7V8 631 aa34.44■■■■□ 3.1
NSMF-210ENST00000484316 NACADO15069 1562 aa34.39■■■■□ 3.1
NSMF-210ENST00000484316 MYO15BQ96JP2 1530 aa34.02■■■■□ 3.04
NSMF-210ENST00000484316 ZCCHC6Q5VYS8 1495 aaKnown RBP33.92■■■■□ 3.02
NSMF-210ENST00000484316 PABPN1Q86U42 306 aaKnown RBP eCLIP33.77■■■■□ 32e-9■■□□□ 13.4
NSMF-210ENST00000484316 DCAF1Q9Y4B6 1507 aa33.73■■■□□ 2.99
NSMF-210ENST00000484316 UNC13AQ9UPW8 1703 aa33.62■■■□□ 2.97
NSMF-210ENST00000484316 DNAJC5BQ9UF47 199 aa33.58■■■□□ 2.97
NSMF-210ENST00000484316 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
NSMF-210ENST00000484316 SCRIBQ14160 1630 aa33.27■■■□□ 2.92
NSMF-210ENST00000484316 SHROOM4Q9ULL8 1493 aa33.1■■■□□ 2.89
NSMF-210ENST00000484316 EIF4G1Q04637 1599 aaKnown RBP32.66■■■□□ 2.82
NSMF-210ENST00000484316 CC2D2AQ9P2K1 1620 aa32.62■■■□□ 2.81
NSMF-210ENST00000484316 CECR2Q9BXF3 1484 aa32.53■■■□□ 2.8
NSMF-210ENST00000484316 NCAPD3P42695 1498 aa31.77■■■□□ 2.68
NSMF-210ENST00000484316 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
NSMF-210ENST00000484316 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
NSMF-210ENST00000484316 BAZ1AQ9NRL2 1556 aaPredicted RBP31.68■■■□□ 2.66
NSMF-210ENST00000484316 SMARCA2P51531 1590 aa31.64■■■□□ 2.66
NSMF-210ENST00000484316 HMGXB3Q12766 1538 aa31.53■■■□□ 2.64
NSMF-210ENST00000484316 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
NSMF-210ENST00000484316 BAZ1BQ9UIG0 1483 aaKnown RBP31.46■■■□□ 2.63
NSMF-210ENST00000484316 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
NSMF-210ENST00000484316 ERCC6Q03468 1493 aa31.21■■■□□ 2.59
NSMF-210ENST00000484316 NESP48681 1621 aa31.15■■■□□ 2.58
NSMF-210ENST00000484316 WIZO95785 1651 aa31.08■■■□□ 2.57
NSMF-210ENST00000484316 RSF1Q96T23 1441 aaPredicted RBP30.98■■■□□ 2.55
NSMF-210ENST00000484316 CUX2O14529 1486 aa30.97■■■□□ 2.55
NSMF-210ENST00000484316 LAMC3Q9Y6N6 1575 aa30.96■■■□□ 2.55
NSMF-210ENST00000484316 CADPSQ9ULU8 1353 aa30.84■■■□□ 2.53
NSMF-210ENST00000484316 PDS5BQ9NTI5 1447 aa30.83■■■□□ 2.53
NSMF-210ENST00000484316 TOP2AP11388 1531 aaKnown RBP30.74■■■□□ 2.51
NSMF-210ENST00000484316 THOC2Q8NI27 1593 aaKnown RBP30.7■■■□□ 2.5
NSMF-210ENST00000484316 KIF21AQ7Z4S6 1674 aa30.68■■■□□ 2.5
NSMF-210ENST00000484316 DNAJC5Q9H3Z4 198 aa30.57■■■□□ 2.48
NSMF-210ENST00000484316 CFTRP13569 1480 aa30.55■■■□□ 2.48
NSMF-210ENST00000484316 MRC2Q9UBG0 1479 aa30.51■■■□□ 2.48
NSMF-210ENST00000484316 FANCD2Q9BXW9 1451 aa30.49■■■□□ 2.47
NSMF-210ENST00000484316 CEP164Q9UPV0 1460 aa30.48■■■□□ 2.47
NSMF-210ENST00000484316 CCDC88BA6NC98 1476 aa30.42■■■□□ 2.46
NSMF-210ENST00000484316 WDR62O43379 1518 aa30.4■■■□□ 2.46
NSMF-210ENST00000484316 URB2Q14146 1524 aaKnown RBP30.19■■■□□ 2.42
NSMF-210ENST00000484316 PRDM2Q13029 1718 aa30.13■■■□□ 2.41
NSMF-210ENST00000484316 SUPT5HO00267 1087 aaKnown RBP29.99■■■□□ 2.39
NSMF-210ENST00000484316 TOPBP1Q92547 1522 aa29.93■■■□□ 2.38
NSMF-210ENST00000484316 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
NSMF-210ENST00000484316 IFT140Q96RY7 1462 aa29.86■■■□□ 2.37
NSMF-210ENST00000484316 DNMBPQ6XZF7 1577 aa29.84■■■□□ 2.37
NSMF-210ENST00000484316 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.36
NSMF-210ENST00000484316 OSCARQ8IYS5 282 aa29.69■■■□□ 2.34
NSMF-210ENST00000484316 POLA1P09884 1462 aaPredicted RBP29.66■■■□□ 2.34
NSMF-210ENST00000484316 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
NSMF-210ENST00000484316 EIF4G3O43432 1585 aaKnown RBP29.59■■■□□ 2.33
NSMF-210ENST00000484316 AQRO60306 1485 aaKnown RBP eCLIP29.56■■■□□ 2.321e-10■■■■■ 41.1
NSMF-210ENST00000484316 SOGA1O94964 1423 aa29.56■■■□□ 2.32
NSMF-210ENST00000484316 RAD54L2Q9Y4B4 1467 aa29.55■■■□□ 2.32
NSMF-210ENST00000484316 CUX1P39880 1505 aa29.55■■■□□ 2.32
NSMF-210ENST00000484316 FGD5Q6ZNL6 1462 aa29.54■■■□□ 2.32
NSMF-210ENST00000484316 TDRD9Q8NDG6 1382 aaKnown RBP29.47■■■□□ 2.31
NSMF-210ENST00000484316 TRIM41Q8WV44 630 aa29.45■■■□□ 2.31
NSMF-210ENST00000484316 FBLN2P98095 1184 aa29.37■■■□□ 2.29
NSMF-210ENST00000484316 WDR97A6NE52 1622 aa29.31■■■□□ 2.28
NSMF-210ENST00000484316 SNAPC4Q5SXM2 1469 aa29.27■■■□□ 2.28
NSMF-210ENST00000484316 GRIN2BQ13224 1484 aa29.24■■■□□ 2.27
NSMF-210ENST00000484316 CHD1O14646 1710 aa29.24■■■□□ 2.27
NSMF-210ENST00000484316 WRNQ14191 1432 aaPredicted RBP eCLIP29.24■■■□□ 2.27
NSMF-210ENST00000484316 ABCA10Q8WWZ4 1543 aa29.2■■■□□ 2.27
NSMF-210ENST00000484316 GAPVD1Q14C86 1478 aa29.19■■■□□ 2.26
NSMF-210ENST00000484316 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
NSMF-210ENST00000484316 CHMP7Q8WUX9 453 aaPredicted RBP29.19■■■□□ 2.26
NSMF-210ENST00000484316 RIMBP3CA6NJZ7 1639 aa29.17■■■□□ 2.26
NSMF-210ENST00000484316 RIMBP3BA6NNM3 1639 aa29.17■■■□□ 2.26
NSMF-210ENST00000484316 RIMBP3Q9UFD9 1639 aa29.17■■■□□ 2.26
NSMF-210ENST00000484316 TOP2BQ02880 1626 aa29.16■■■□□ 2.26
NSMF-210ENST00000484316 ARHGEF11O15085 1522 aa29.15■■■□□ 2.26
NSMF-210ENST00000484316 SYNJ1O43426 1573 aa29.14■■■□□ 2.26
NSMF-210ENST00000484316 BIVM-ERCC5R4GMW8 1640 aa29.12■■■□□ 2.25
NSMF-210ENST00000484316 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
NSMF-210ENST00000484316 ABCA5Q8WWZ7 1642 aa29.09■■■□□ 2.25
NSMF-210ENST00000484316 PBRM1Q86U86 1689 aa29.06■■■□□ 2.24
NSMF-210ENST00000484316 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
NSMF-210ENST00000484316 CLASP1Q7Z460 1538 aa28.97■■■□□ 2.23
NSMF-210ENST00000484316 ARAP1Q96P48 1450 aa28.89■■■□□ 2.22
NSMF-210ENST00000484316 GRIN2AQ12879 1464 aa28.86■■■□□ 2.21
NSMF-210ENST00000484316 ADAMTS12P58397 1594 aa28.86■■■□□ 2.21
NSMF-210ENST00000484316 FHAD1B1AJZ9 1412 aa28.85■■■□□ 2.21
NSMF-210ENST00000484316 ERICH3Q5RHP9 1530 aa28.84■■■□□ 2.21
NSMF-210ENST00000484316 NUP160Q12769 1436 aa28.74■■■□□ 2.19
NSMF-210ENST00000484316 CEP170Q5SW79 1584 aa28.71■■■□□ 2.19
NSMF-210ENST00000484316 KIF27Q86VH2 1401 aa28.67■■■□□ 2.18
NSMF-210ENST00000484316 IGF1RP08069 1367 aa28.61■■■□□ 2.17
NSMF-210ENST00000484316 TRHP20396 242 aaPredicted RBP28.57■■■□□ 2.16
NSMF-210ENST00000484316 ERCC6L2Q5T890 1561 aa28.55■■■□□ 2.16
NSMF-210ENST00000484316 SHROOM2Q13796 1616 aa28.51■■■□□ 2.15
NSMF-210ENST00000484316 JPH4Q96JJ6 628 aa28.5■■■□□ 2.15
NSMF-210ENST00000484316 PRG4Q92954 1404 aaPredicted RBP28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms