RNA–Protein interactions for RNA: ENST00000553332.5

XRCC3-203, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-203ENST00000553332 NISCHQ9Y2I1 1504 aa35.04■■■■□ 3.2
XRCC3-203ENST00000553332 CCDC180Q9P1Z9 1646 aa31.22■■■□□ 2.59
XRCC3-203ENST00000553332 ABCC9O60706 1549 aa30.73■■■□□ 2.51
XRCC3-203ENST00000553332 RB1CC1Q8TDY2 1594 aa29.46■■■□□ 2.31
XRCC3-203ENST00000553332 DCAF8L2P0C7V8 631 aa29.44■■■□□ 2.3
XRCC3-203ENST00000553332 NACADO15069 1562 aa29.36■■■□□ 2.29
XRCC3-203ENST00000553332 ZCCHC6Q5VYS8 1495 aaKnown RBP29.15■■■□□ 2.26
XRCC3-203ENST00000553332 MYO15BQ96JP2 1530 aa29.09■■■□□ 2.25
XRCC3-203ENST00000553332 DCAF1Q9Y4B6 1507 aa28.94■■■□□ 2.22
XRCC3-203ENST00000553332 UNC13AQ9UPW8 1703 aa28.87■■■□□ 2.21
XRCC3-203ENST00000553332 PABPN1Q86U42 306 aaKnown RBP eCLIP28.71■■■□□ 2.19
XRCC3-203ENST00000553332 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
XRCC3-203ENST00000553332 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
XRCC3-203ENST00000553332 DNAJC5BQ9UF47 199 aa28.32■■■□□ 2.12
XRCC3-203ENST00000553332 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
XRCC3-203ENST00000553332 EIF4G1Q04637 1599 aaKnown RBP27.83■■■□□ 2.05
XRCC3-203ENST00000553332 CC2D2AQ9P2K1 1620 aa27.78■■■□□ 2.04
XRCC3-203ENST00000553332 CECR2Q9BXF3 1484 aa27.59■■■□□ 2.01
XRCC3-203ENST00000553332 SMARCA4P51532 1647 aa27.24■■□□□ 1.95
XRCC3-203ENST00000553332 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
XRCC3-203ENST00000553332 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
XRCC3-203ENST00000553332 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
XRCC3-203ENST00000553332 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
XRCC3-203ENST00000553332 MROH2BQ7Z745 1585 aa27.03■■□□□ 1.92
XRCC3-203ENST00000553332 HMGXB3Q12766 1538 aa26.95■■□□□ 1.9
XRCC3-203ENST00000553332 PEG3Q9GZU2 1588 aa26.92■■□□□ 1.9
XRCC3-203ENST00000553332 BAZ1BQ9UIG0 1483 aaKnown RBP26.89■■□□□ 1.9
XRCC3-203ENST00000553332 WIZO95785 1651 aa26.77■■□□□ 1.88
XRCC3-203ENST00000553332 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
XRCC3-203ENST00000553332 NESP48681 1621 aa26.55■■□□□ 1.84
XRCC3-203ENST00000553332 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
XRCC3-203ENST00000553332 TOP2AP11388 1531 aaKnown RBP26.42■■□□□ 1.82
XRCC3-203ENST00000553332 LAMC3Q9Y6N6 1575 aa26.41■■□□□ 1.82
XRCC3-203ENST00000553332 CADPSQ9ULU8 1353 aa26.31■■□□□ 1.8
XRCC3-203ENST00000553332 KIF21AQ7Z4S6 1674 aa26.26■■□□□ 1.79
XRCC3-203ENST00000553332 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
XRCC3-203ENST00000553332 CUX2O14529 1486 aa26.19■■□□□ 1.78
XRCC3-203ENST00000553332 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
XRCC3-203ENST00000553332 CCDC88BA6NC98 1476 aa26.13■■□□□ 1.77
XRCC3-203ENST00000553332 CFTRP13569 1480 aa26.11■■□□□ 1.77
XRCC3-203ENST00000553332 FANCD2Q9BXW9 1451 aa26.03■■□□□ 1.76
XRCC3-203ENST00000553332 CEP164Q9UPV0 1460 aa26■■□□□ 1.75
XRCC3-203ENST00000553332 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
XRCC3-203ENST00000553332 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
XRCC3-203ENST00000553332 SUPT5HO00267 1087 aaKnown RBP25.96■■□□□ 1.75
XRCC3-203ENST00000553332 WDR62O43379 1518 aa25.9■■□□□ 1.74
XRCC3-203ENST00000553332 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
XRCC3-203ENST00000553332 TOPBP1Q92547 1522 aa25.6■■□□□ 1.69
XRCC3-203ENST00000553332 DNAJC5Q9H3Z4 198 aa25.57■■□□□ 1.68
XRCC3-203ENST00000553332 DNMBPQ6XZF7 1577 aa25.56■■□□□ 1.68
XRCC3-203ENST00000553332 ABCC8Q09428 1581 aa25.55■■□□□ 1.68
XRCC3-203ENST00000553332 IFT140Q96RY7 1462 aa25.45■■□□□ 1.66
XRCC3-203ENST00000553332 ZNF608Q9ULD9 1512 aaPredicted RBP25.38■■□□□ 1.65
XRCC3-203ENST00000553332 POLA1P09884 1462 aaPredicted RBP25.36■■□□□ 1.65
XRCC3-203ENST00000553332 CUX1P39880 1505 aa25.36■■□□□ 1.65
XRCC3-203ENST00000553332 TARBP1Q13395 1621 aaKnown RBP25.34■■□□□ 1.65
XRCC3-203ENST00000553332 FGD5Q6ZNL6 1462 aa25.3■■□□□ 1.64
XRCC3-203ENST00000553332 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
XRCC3-203ENST00000553332 EIF4G3O43432 1585 aaKnown RBP25.28■■□□□ 1.64
XRCC3-203ENST00000553332 SOGA1O94964 1423 aa25.27■■□□□ 1.64
XRCC3-203ENST00000553332 AQRO60306 1485 aaKnown RBP eCLIP25.23■■□□□ 1.63
XRCC3-203ENST00000553332 TDRD9Q8NDG6 1382 aaKnown RBP25.17■■□□□ 1.62
XRCC3-203ENST00000553332 WRNQ14191 1432 aaPredicted RBP eCLIP25.13■■□□□ 1.61
XRCC3-203ENST00000553332 OSCARQ8IYS5 282 aa25.12■■□□□ 1.61
XRCC3-203ENST00000553332 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
XRCC3-203ENST00000553332 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
XRCC3-203ENST00000553332 WDR97A6NE52 1622 aa25.11■■□□□ 1.61
XRCC3-203ENST00000553332 TOP2BQ02880 1626 aa25.1■■□□□ 1.61
XRCC3-203ENST00000553332 CHD1O14646 1710 aa25.03■■□□□ 1.6
XRCC3-203ENST00000553332 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
XRCC3-203ENST00000553332 FBLN2P98095 1184 aa24.99■■□□□ 1.59
XRCC3-203ENST00000553332 PBRM1Q86U86 1689 aa24.98■■□□□ 1.59
XRCC3-203ENST00000553332 SNAPC4Q5SXM2 1469 aa24.98■■□□□ 1.59
XRCC3-203ENST00000553332 GRIN2BQ13224 1484 aa24.97■■□□□ 1.59
XRCC3-203ENST00000553332 GAPVD1Q14C86 1478 aa24.96■■□□□ 1.59
XRCC3-203ENST00000553332 ABCA5Q8WWZ7 1642 aa24.95■■□□□ 1.58
XRCC3-203ENST00000553332 MAGI1Q96QZ7 1491 aaPredicted RBP24.9■■□□□ 1.58
XRCC3-203ENST00000553332 CHMP7Q8WUX9 453 aaPredicted RBP24.86■■□□□ 1.57
XRCC3-203ENST00000553332 SYNJ2O15056 1496 aa24.83■■□□□ 1.56
XRCC3-203ENST00000553332 RIMBP3CA6NJZ7 1639 aa24.77■■□□□ 1.56
XRCC3-203ENST00000553332 RIMBP3BA6NNM3 1639 aa24.77■■□□□ 1.56
XRCC3-203ENST00000553332 RIMBP3Q9UFD9 1639 aa24.77■■□□□ 1.56
XRCC3-203ENST00000553332 TRIM41Q8WV44 630 aa24.76■■□□□ 1.55
XRCC3-203ENST00000553332 ADAMTS12P58397 1594 aa24.73■■□□□ 1.55
XRCC3-203ENST00000553332 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
XRCC3-203ENST00000553332 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
XRCC3-203ENST00000553332 CLASP1Q7Z460 1538 aa24.69■■□□□ 1.54
XRCC3-203ENST00000553332 GRIN2AQ12879 1464 aa24.66■■□□□ 1.54
XRCC3-203ENST00000553332 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
XRCC3-203ENST00000553332 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
XRCC3-203ENST00000553332 CEP170Q5SW79 1584 aa24.57■■□□□ 1.52
XRCC3-203ENST00000553332 IGF1RP08069 1367 aa24.54■■□□□ 1.52
XRCC3-203ENST00000553332 CYB5RLQ6IPT4 315 aa24.53■■□□□ 1.52
XRCC3-203ENST00000553332 NUP160Q12769 1436 aa24.52■■□□□ 1.52
XRCC3-203ENST00000553332 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
XRCC3-203ENST00000553332 CUL7Q14999 1698 aa24.5■■□□□ 1.51
XRCC3-203ENST00000553332 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
XRCC3-203ENST00000553332 CARMIL1Q5VZK9 1371 aa24.4■■□□□ 1.5
XRCC3-203ENST00000553332 ERCC6L2Q5T890 1561 aa24.39■■□□□ 1.5
XRCC3-203ENST00000553332 SHROOM2Q13796 1616 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms